transcript:BL89693_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL89693_cuf0
Unique Nametranscript:BL89693_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL89693_cuf0

>transcript:BL89693_cuf0-protein ID=transcript:BL89693_cuf0-protein|Name=transcript:BL89693_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=252bp
TILDSELHIEGYHLYRNDRNRHGGGVAIYVSEAYSHTEVPELKQPGLEAV
FCTVNIPFTKPITIASVYRPPSSPVEFFSLLRDGLEKWSLTMSDSELFLL
GDFNVDINSHSSPGAKSLKYLNREFQLQQVINTPTRVNEHSSSLIDHIYC
SDIHRVNDYGVVHCTLSDHYAVYCIRKGKRPNSAPKYVTSRKFTKFQEED
FLTDLRALDWSLVYQTTCVEEAWSIFKSYFITISDIHAPYISKRSKAMQP
PW
Run BLAST on NCBI

mRNA from alignment at Sc0000555:93624..94380+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL89693_cuf0 ID=transcript:BL89693_cuf0|Name=transcript:BL89693_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=757bp|location=Sequence derived from alignment at Sc0000555:93624..94380+ (Branchiostoma lanceolatum)
ACGATCCTGGACTCAGAGCTACACATAGAGGGCTATCACCTGTACAGAAA
TGACAGAAACAGACACGGGGGTGGGGTAGCCATATATGTGTCAGAGGCGT
ACAGCCATACAGAAGTACCTGAGCTAAAACAGCCTGGCCTGGAGGCAGTT
TTCTGCACAGTAAACATACCTTTCACTAAACCCATCACCATTGCTTCTGT
GTACAGACCACCATCAAGCCCTGTAGAGTTTTTCTCCCTGTTGAGGGATG
GTCTTGAGAAATGGAGTCTGACCATGTCAGACTCCGAACTGTTTCTACTG
GGCGACTTCAATGTTGACATTAACTCACACAGTAGTCCAGGTGCTAAGTC
TCTAAAATACCTAAACCGTGAGTTCCAACTACAGCAGGTGATAAATACAC
CAACTCGAGTAAACGAACATTCGAGTAGTCTGATTGACCATATCTACTGT
AGTGACATACACCGAGTTAATGACTATGGTGTAGTTCATTGTACGCTTTC
TGATCACTACGCAGTGTATTGTATTAGAAAGGGTAAACGTCCAAACTCAG
CCCCTAAGTATGTAACCTCACGCAAGTTTACAAAGTTCCAAGAAGAGGAC
TTTCTCACTGACCTCAGGGCTCTTGATTGGAGCTTGGTTTACCAGACTAC
CTGTGTAGAAGAAGCATGGTCAATATTTAAGTCCTACTTTATTACCATTA
GTGACATTCATGCTCCCTATATCTCCAAGCGCTCTAAAGCTATGCAACCC
CCATGGC

Coding sequence (CDS) from alignment at Sc0000555:93624..94380+

>transcript:BL89693_cuf0 ID=transcript:BL89693_cuf0|Name=transcript:BL89693_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=756bp|location=Sequence derived from alignment at Sc0000555:93624..94380+ (Branchiostoma lanceolatum)
ACGATCCTGGACTCAGAGCTACACATAGAGGGCTATCACCTGTACAGAAA
TGACAGAAACAGACACGGGGGTGGGGTAGCCATATATGTGTCAGAGGCGT
ACAGCCATACAGAAGTACCTGAGCTAAAACAGCCTGGCCTGGAGGCAGTT
TTCTGCACAGTAAACATACCTTTCACTAAACCCATCACCATTGCTTCTGT
GTACAGACCACCATCAAGCCCTGTAGAGTTTTTCTCCCTGTTGAGGGATG
GTCTTGAGAAATGGAGTCTGACCATGTCAGACTCCGAACTGTTTCTACTG
GGCGACTTCAATGTTGACATTAACTCACACAGTAGTCCAGGTGCTAAGTC
TCTAAAATACCTAAACCGTGAGTTCCAACTACAGCAGGTGATAAATACAC
CAACTCGAGTAAACGAACATTCGAGTAGTCTGATTGACCATATCTACTGT
AGTGACATACACCGAGTTAATGACTATGGTGTAGTTCATTGTACGCTTTC
TGATCACTACGCAGTGTATTGTATTAGAAAGGGTAAACGTCCAAACTCAG
CCCCTAAGTATGTAACCTCACGCAAGTTTACAAAGTTCCAAGAAGAGGAC
TTTCTCACTGACCTCAGGGCTCTTGATTGGAGCTTGGTTTACCAGACTAC
CTGTGTAGAAGAAGCATGGTCAATATTTAAGTCCTACTTTATTACCATTA
GTGACATTCATGCTCCCTATATCTCCAAGCGCTCTAAAGCTATGCAACCC
CCATGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL89693gene:BL89693Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL89693_cuf0-E1BL89693_cuf0-E1-1564476830-481631Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL89693_cuf0transcript:BL89693_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000555genomeSc0000555:93624..94380 +
Properties
Property NameValue
Transcript idBL89693_cuf0
Biotypeprotein_coding