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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97231_cuf3 >transcript:BL97231_cuf3-protein ID=transcript:BL97231_cuf3-protein|Name=transcript:BL97231_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=161bp
MQSRDVTCMTSYTNGTVLTGDELCDPPKPPPVRSCGFEPCPLSESWEATP
WHACSVTCGQGIRSRRVRCKVTYPNGTMLYAPDVRCNDTEKLRTLKPCFG
MECAAKPIEIVWSKCSSKCGPGERTRRVKCHQDDALCNVKYRSVRKVACY
GSRCNGVWKTG Run BLAST on NCBI mRNA from alignment at Sc0000303:200988..203608+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97231_cuf3 ID=transcript:BL97231_cuf3|Name=transcript:BL97231_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2621bp|location=Sequence derived from alignment at Sc0000303:200988..203608+ (Branchiostoma lanceolatum)
CTAGTTAGTCTGCAAATGGCTGATGAAGCCCTTTCTGACCGGGATTCTGT
AACCACATCAAGAGAGGTGAAACGAAAAGAGTAGGGGTCCTTCCCGGTGT
GAGTGGATCAAATAAATGTGCAATATCAAAAATATATGGTACTTGTACAG
TTAGGTACAAATCTGGTGTGCTACGCCATGAGGCGGTTTACCACGGATAT
GCAATATTGACAAACAAACAAACAAACAAACGAACACACGATGTGGTGTT
CCAACTTCAATGATTTACCACATCACATTAACGCCAGCTTTCTTCCATGT
CCAGGAAGTGGGAGGTTAGCGCTTGGGCCGGGTGTTCGACGTCGTGTGGA
CAGGGCATGCAGTCCCGCGACGTCACGTGCATGACGTCATACACCAACGG
CACGGTTCTGACTGGTGACGAATTGTGCGACCCACCCAAACCGCCTCCTG
TTCGCTCGTGCGGGTTCGAACCCTGTCCGCTCAGGTAGACAAGACAACAT
ATCATCCTCCTCAGCTCTGTGACACTCTTCTCAGCCAATCATCTCATCCT
TTCGTATGAATATGTACCTTAGGGGTAGGGAATTTTTCAACCCCTACATA
TACTTCGCCTTTGGAGTCAGTTAGTCGAGCTTGTCTAAGCTTGATGTTTC
TGACATAGGGAGAAGAAATGCTGCTTCAGCGGGCGTTAGTTCAATGCCCA
GATTTGGGCTGTGTGGCCTAAATGTACTGAGCAATCTCTTTGAAAAGAAG
AAATTTCCCGGCCTTGAACTTTAGCACTGCCACGCCCGTTCACCTTCCTA
CTTCAACCCATGTCATCTATTTTCCCACTTTCTCAAGAACCTAACTTGGA
ATGCTACTGTCTTTCAATATCTCTCATCGTAGTCGGAAACCTTATCTACA
TGTATCTATATATTTCTATTCAGCCTGTCTCATCTGTTTTTGTCACTCTC
TCAACGACTGAACTTTGAATGGCTGCTATCTGTTACTGCCAATCATCACA
GTCATGTGATCACTATCTTATTTCTGTACGAGTTAGAAGTTGGAATTGAC
TCTTCCATAGATACCATCGTAGTCGTGGCATAAATTTAAACTTACATAAA
CTTACGAATACAGTGGAAATGGATGTACATTTGTATCTATAGGGTTAAAG
GTTTTCAATGTTAAATGGTACAGGGGATTCGATATTTCAGGGTACATAAT
TTTGATTTGAAAACTTTATTATTCCTTCATAATGTCACTTTATTCGGCTG
TGGTAAACTTTATGTACAAAGATAAAGAGAACTGTTAAAGATTTTCTATT
GGTAGAAACACAACTGATAAATCGGAATGGTGCTATTTCTGTTCATTTTG
CCATTGAGTACGTCAGTGCAATAGACATACAAAAGCAATAAACAACTGCA
AGTTATCTATTTGTATAATTCATTCCCACACTGATCATAAGTATACAGAC
CGAAGGTACACGTGCGACGTAAAAATTACTTTTGACAACATTTCATGATC
AAGGCGGCCATATTGTTCCGCAGTGAATCATGGGAAGCCACGCCCTGGCA
CGCATGCTCCGTGACGTGCGGACAGGGTATCCGGTCCAGGCGGGTCCGGT
GTAAGGTGACGTATCCCAACGGAACCATGCTGTACGCGCCTGACGTCAGG
TGTAACGATACGGAGAAACTCAGAACTCTCAAACCCTGCTTCGGCATGGA
ATGTGCTGCCAAACCAATCGAGATCGTCTGGTCAAAGGTGTTTATTTTCA
ACATATACGTTATAGATATAACATCTACTAACATATTCCACTAGGGTGCA
TAATTTTACTACCTTAAAAAGATACGTCCAAATAGATTTCCAACCCAACC
TTCCCCAGTATACCGCACTCCTGTATATCTAAACTGTGCATGCCTGGGAG
TTTCAAAGTGGCGGATTTATGTTACCCGGCGGATTAATGTTCATGGAGGT
TATGTTTATAGAGTTATTAGGACTTTAATGATGGAATCTGTATCTTTGCT
AGAAAGGTTCCAACAAATAGCTTGGTAGCATCAAACAACGAAGAGAAATA
AGATGTACAATGATAGTACAGGCAGGTGAAAAAGAACCCAAATAGAATTG
ACATGGGCGAAATCCAGTAGAAAAGCTGGCGGTGTGGTGCGTTCCTTTAT
GTGAAAACAGTTCAGTACCAAGGAGAGATATGATATAAAAATGGCTCCAC
TACTTACCGTACTAAGCACCCATGGCCATGAGGGTTAAGTAGTCAAAGAC
AGTGTGAAGTCAATGACTGCATGTTTGTTCGTGTACACGTTGAGAATGAT
CATCTTTGATACCGCTTGATCAAGTCACCTTGTACGATACTGACATGTTG
AAATAAAATATTTGTTAGGAACTTATCAGTAACTTTTCATGTGTTCAGGA
ATTGAAGTGTTAGGCTGTCTTGTTGCTGTGACTTACGGTGCTTACTCGTT
GTGACGTAATGTTTTGTCGTGACGTGCAGTGTTCGTCTAAGTGTGGTCCC
GGAGAGAGGACAAGACGGGTCAAGTGTCACCAGGATGACGCCCTCTGCAA
TGTAAAGTACCGTTCCGTCCGCAAGGTGGCGTGTTACGGCAGCAGGTGTA
ACGGTGTTTGGAAGACCGGAC Coding sequence (CDS) from alignment at Sc0000303:200988..203608+ >transcript:BL97231_cuf3 ID=transcript:BL97231_cuf3|Name=transcript:BL97231_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1449bp|location=Sequence derived from alignment at Sc0000303:200988..203608+ (Branchiostoma lanceolatum)
ATGCAGTCCCGCGACGTCACGTGCATGACGTCATACACCAACGGCACGGT
TCTGACTGGTGACGAATTGTGCGACCCACCCAAACCGCCTCCTGTTCGCT
CGTGCGGGTTCGAACCCTGTCCGCTCAGTGAATCATGGGAAGCCACGCCC
TGGCACGCATGCTCCGTGACGTGCGGACAGGGTATCCGGTCCAGGCGGGT
CCGGTGTAAGGTGACGTATCCCAACGGAACCATGCTGTACGCGCCTGACG
TCAGGTGTAACGATACGGAGAAACTCAGAACTCTCAAACCCTGCTTCGGC
ATGGAATGTGCTGCCAAACCAATCGAGATCGTCTGGTCAAAGTGTTCGTC
TAAGTGTGGTCCCGGAGAGAGGACAAGACGGGTCAAGTGTCACCAGGATG
ACGCCCTCTGCAATGTAAAGTACCGTTCCGTCCGCAAGGTGGCGTGTTAC
GGCAGCAGGTGTAACGGTGTTTGGAAGACCGGAATGCAGTCCCGCGACGT
CACGTGCATGACGTCATACACCAACGGCACGGTTCTGACTGGTGACGAAT
TGTGCGACCCACCCAAACCGCCTCCTGTTCGCTCGTGCGGGTTCGAACCC
TGTCCGCTCAGTGAATCATGGGAAGCCACGCCCTGGCACGCATGCTCCGT
GACGTGCGGACAGGGTATCCGGTCCAGGCGGGTCCGGTGTAAGGTGACGT
ATCCCAACGGAACCATGCTGTACGCGCCTGACGTCAGGTGTAACGATACG
GAGAAACTCAGAACTCTCAAACCCTGCTTCGGCATGGAATGTGCTGCCAA
ACCAATCGAGATCGTCTGGTCAAAGTGTTCGTCTAAGTGTGGTCCCGGAG
AGAGGACAAGACGGGTCAAGTGTCACCAGGATGACGCCCTCTGCAATGTA
AAGTACCGTTCCGTCCGCAAGGTGGCGTGTTACGGCAGCAGGTGTAACGG
TGTTTGGAAGACCGGAATGCAGTCCCGCGACGTCACGTGCATGACGTCAT
ACACCAACGGCACGGTTCTGACTGGTGACGAATTGTGCGACCCACCCAAA
CCGCCTCCTGTTCGCTCGTGCGGGTTCGAACCCTGTCCGCTCAGTGAATC
ATGGGAAGCCACGCCCTGGCACGCATGCTCCGTGACGTGCGGACAGGGTA
TCCGGTCCAGGCGGGTCCGGTGTAAGGTGACGTATCCCAACGGAACCATG
CTGTACGCGCCTGACGTCAGGTGTAACGATACGGAGAAACTCAGAACTCT
CAAACCCTGCTTCGGCATGGAATGTGCTGCCAAACCAATCGAGATCGTCT
GGTCAAAGTGTTCGTCTAAGTGTGGTCCCGGAGAGAGGACAAGACGGGTC
AAGTGTCACCAGGATGACGCCCTCTGCAATGTAAAGTACCGTTCCGTCCG
CAAGGTGGCGTGTTACGGCAGCAGGTGTAACGGTGTTTGGAAGACCGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000303 | genome | Sc0000303:200988..203608 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97231_cuf3 |
| Biotype | protein_coding |
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