TCONS_00004025 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004025
Unique NameTCONS_00004025
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1642

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004025 ID=TCONS_00004025|Name=TCONS_00004025|organism=Clytia hemisphaerica|type=transcript|length=1642bp
CCAGATACATTATGCAAAACCCAGATACATTATGCAAAACCCAGATACAT
TCTGTAAAACCCAGATACATTATGCAAAACCCAGATACATTATGCAAAAC
CCAGATACATTCTGCAAAACTTTCtgaaatcttttaaatttgCTTCGAAG
ATTTTCCGAAATTTTGTAATGATAGCTGTTATGTCACGATTTATATTGAT
ATTTATGTTTTAGTAAAAATAAGTAAACTTGGTGGATAACGACATGTAAT
TACTAAGATGAGAAAATGTTAACATCATGTTCAGTATGAACCTGGGTTTT
CAGAATCAAAGAAATATATGGCTGTCATTGTCCTGTCCATCTCCTCAATG
AGAGGTGACATGTTATGAGAAGCTTTCGATTTGCGGCTAGCAGTTTTCGg
TTTTTTTCAACTCGTTGCTTTGATGCGCCATCTTGTCAAAGAGTCATCTC
AACCAATTGACACATGTTAAAAGCGGACATAGGATCCAATCGTTAATTAA
TGCTTATGATGTTCAAGATGTATAaaacccttcatatatttgtggTCGGC
AGGAATGACAGATTTTCTTTCGACATCTCAACTCAACCAAGTCAACTAAA
CATTAAGCACGACTCGAGACAGGATGACAGGCTTTTTGATAGACGATATT
TTAAGCAAGAAAGTGGCCAAAGAAAATGAGACGATACATGTGAGATCAGC
ATTCCTCCCAACTCAATCTGATCACCATTGCAAACGTCTCTACGCGCCGC
CCCTTCCGCCTTTGCTACCACCATCAAACCACCATTACCACCCTTATCAT
CGACATCACCGCTTCTATCGTTCCCGATCACCCCCGCCTGCTATTTCACC
TCGTTCATCACACTCAGACGATTTGGATCTTGACAAACTTTCACGACGAC
CACGGACTTCAATCACTATGTGCCAAAGAGAATTTCTGGAAACGGAGTTT
CAGAAAGAAAGATACCCGACACTGGCGTACATTGACAAACTATCACGCAA
AGTCCACTTACAACAATATGTCATAAAGGTTTGGTTTCAAAATCGGAGAG
CAAAATATCGAAAAGAAGGGCACCGTCGAAAACCTTCCAAAGAAGACACA
AACACAAAACCTgagtattttacagaacgaAAAGAAAGCAAAGACGACAA
AGTACATTTATTGAAAGTTCATTCTTCCGAAAAATACACACCAGCTTCAG
CAACGAAATATAGTGGACGGTATCTCTATAATGAAAGGAATTCAGCACAA
ACGTTGCTATGGCAACCTCGAATGAAATCATCTTGCGAAGAGCATTGTGG
GTGCTTCACGTGTGGGTGATTGACCGATCTTCTATTGAATCGATTAATTG
ACTTCATATTGCGCTAATTAATGAATTCACTTATTTACTGTTTTGTCGGA
ATCCTTATTCTCACTGACATTCAAAATAATCATCAAGTTCATAATTACAT
GGGATGTTTAAATTTAGTTTCTAGTTGTGTATTATAGATTGTATTATTCA
ATTATTGTATTAtataaattccttatttttttatcatatctttttgtttt
tcgttGCATTTTATTGAAGAGTATTTATTGGTTGTTGATATTTATTTGAG
AATTtattcagaaaaagaaaattattactTGTTTACTATAAt
Run BLAST on NCBI

protein sequence of TCONS_00004025-protein

>TCONS_00004025-protein ID=TCONS_00004025-protein|Name=TCONS_00004025-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
MTGFLIDDILSKKVAKENETIHVRSAFLPTQSDHHCKRLYAPPLPPLLPP
SNHHYHPYHRHHRFYRSRSPPPAISPRSSHSDDLDLDKLSRRPRTSITMC
QREFLETEFQKERYPTLAYIDKLSRKVHLQQYVIKVWFQNRRAKYRKEGH
RRKPSKEDTNTKPEYFTERKESKDDKVHLLKVHSSEKYTPASATKYSGRY
LYNERNSAQTLLWQPRMKSSCEEHCGCFTCG
Run BLAST on NCBI

transcript from alignment at sc0000039:324990..332149+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004025 ID=TCONS_00004025|Name=TCONS_00004025|organism=Clytia hemisphaerica|type=transcript|length=7160bp|location=Sequence derived from alignment at sc0000039:324990..332149+ (Clytia hemisphaerica)
CCAGATACATTATGCAAAACCCAGATACATTATGCAAAACCCAGATACAT TCTGTAAAACCCAGATACATTATGCAAAACCCAGATACATTATGCAAAAC CCAGATACATTCTGCAAAACTTTCtgaaatcttttaaatttgCTTCGAAG ATTTTCCGAAATTTTGTAATGATAGCTGTTATGTCACGATTTATATTGAT ATTTATGTTTTAGTAAAAATAAGTAAACTTGGTGGATAACGACATGTAAT TACTAAGATGAGAAAATGTTAACATCATGTTCAGTATGAACCTGGGTTTT CAGAATCAAAGAAATATATGGCTGTCATTGTCCTGTCCATCTCCTCAATG AGAGGTGACATGTTATGAGAAGCTTTCGATTTGCGGCTAGCAGTTTTCGG TGAGTGAATTTATTTTAAAGTAATTATTGATATAACACAAGATTTGTTTG CCCTGCTGATCTCAAGGTGGAAGAGTTTATATACgataaaaaacttattt ttataaaactcGTTCGTgttgtttttaatgaattttattCAAAACACAAG AAATAGAGATTTTGAAAGCTACGAGGAGACACCAAAAGTTCGAAAGCGAC AAGTTAATCTGATGAAAGCAACTCCCTCTTGCTAGACGAGAGTTATGGAA GGCAAACAAATAATACGACAAGATAGAGAGGTTATCAGTTAATGTTTTGA ATACTTCTCAACTCATTTGGTCTGTCGTCAAGGAAACGTAACGATCGATT GATACTACGTGTATTTTTTGTGAAACAATTAGTTGCTGTTTTATAATCAA AAAAATGATGGTATTAGAAAAGATGCAGTGTTTCTGATGTTATGAGCTTA TGTTATTATAACAGCAAAATGTTCTTGTTCCTTTTGGTTGTTAACGTTTT GCAATNGCTGATGTTATTATAacagcaaaatgtttttgttcCTTTTGGTT GTCAACGTTTTGCAATTTTGTGGTTGTGAACTTCTGGAACCGAAGAACGT GAAACGGAAAGTTAACCTTAAAGGTGAGAGTTTCTTCTTTTACTCaactt ttgaaattcttttcgaTATTCGTCTCAGAGAATTTAAATGATATACTTTT GTGGTTTGTTTTCCTCTTTAACCTCAATCTCATCATAAATCTCATTTTTA ATGAGAGCTTGATTTAAATCAGTCAAGTCACCAGAAGTCACTATTTTTAT AACGTTCTTTCTTTGACCAGAATTAAGCTACTTAAATTAGACATCTGTTC TGACTACTTTTAAAGCCTTCCCCATATTGAATATCCAAAAATCCAGCAAT ACTGAAGTGTTTTTACTATGTATCgtgcatacacgctttttttataagaa tacactttataagaatgtccatgatgaaaatggccaaaaaatgaagaata tgctcagaatatcaccatcatagaattttgctactcaagctaagaatgcc attttagaccattttttagtcaattaggatcctaacctaagaatgctgta agaatattctaggatgattttcccaaaaaagttaagaataaccatgatga aatggatttacaccattcttataaaaaaaaagcgtgtagtattGTTGACA AGCCGATAGTTTCGTAATTTGTTTTATCTTGTCTCACTGCACCGCCCCTT GAAAGATGAGACGACGTATTTTGTTAAAACGATGATAACGTTAAGTGACA CTATTTATTGTATTGTTCTCTTTTCCAGATATCTCGAAGCTTGTGCCACT CAATTTTGTAGCAGACACAGCTGGTATCGGAGATTTTGACCCTGAGAAAA ATGGACTTCTTATACACGAAtattttgatcaattatatAAGAAATATCCA CAGTATAAGAAATTCTCTGAACTTCAAGATGAACAGATTTTAATGGTGGA TCCTTTTAAAGACAAAAATAACCCGTATGCTGACGCTGTGAAAAAGTTTA AATGGGTTTTAGAATCCATATATCAAGACAATGGAGGTAAACTGGAttct gaaaaatcggggaaCAATGACGCCCGATTTCAATTAGATTCTGCAGAGGT TGCAGAATATGAGCGTCCAACTGTACCTCCCTTATCAGAAATTCAAACAC CAGCAGATGTTGATGATTCAGATAATTTGTATGATGGAGATAATATACAA TTGGATATCGATGGAGATGATGATGGGGATAATTTAAATGAATTTAAGTA GTGAATGACACACAATTTTGTATATAATTTTTCTAGTTTCTTTAAAAGAA AGCTGTCACTAGCTATTGAATTTCCCAAACGTTATTAGTGTGCTCACATT TCGTAGGAGTGAAGGTATTTAGGACACATTAAAGGTGCGAATCTAAAAAG TAGACGCTAGCGTTCCAAACCATTTATAAGCAATCTTATAGGCGTTGGTG GTTTAAGCCCAAACAATTTGCTTCTTGAAACAATTTTAATAAGTTGTAAT AAAATGTTAAATGTTATGATTTGTGAATTGATAATTTTATTAAGTTCGAA GTATTATGGTGTCatcatttttcttaaaataactcCAAAACCACCAAAAT GTATAAACTTCTGACATTAAAATGAGAAGGAAGTCCCTATTCCTTTGATT CATTTGCATTCATTAAGAAAATTTGTGTCGTCATCATGACGTTTCGCGTG TCACAAATTAACACCTCCCCTTAGCCCTTTGTCGAGAAGCAAACTCACTC CAGGTTCAAACttctacattttttataagcaatcagtTGGCTAAGGCTCC AAGACTCAAACTTGccaatttatttttcatctcgtaaagtaaaagttttt ttgataatCTAACCATAGCAAGggatagcccttgacccaataacttaaat atataaatattgtataatatcaggggtggtcaaagtAAACTTtccagaaa atgagctagaatacTATGCAACTCCAGGGCTGACCCGAAAATTGcaattg cttataaaaaaatatgtaccaATGAATGCAATGCAGAATTTTAGGATTTT CAAGAGTTAACAATCTTGTACTGTTTCGCCACTTAAAATGAAATGTTCTT GTTGTCTTTTAGACTTTTCCGTTTATTACTTAGCTCTAGTTCAGACAAAT TACTTTCTGTTCTCTCAATTCCAATTTTCAAAGCAGACGAAAAGTGGGCA GAAAGTttgcagttaaaatctttgcttgaaaaagattaaatgaagtcatt gcattaaACACCCACTGGGATCCCTTCTCACTGGAAAGTTTTGCagaaat atcgtccccagttgAAAATTAtgctccaatttttgtccccattgaaaata atcaaataaacctcAAATAATGAACctaactgcaaaatattttgctattt ttcccttccaaactaaattttctgacttgaaaacaatggaatttaaatct GTGAAAAGGGTCTCCAATCTCCAGTTTCAATTCGTTATTTTTGCCCCCAC TGgttgaaaaaaatcctaccgggtctgtgaaaaaGGTGTGAAAAGGGTGA TATTGAAGTCAAAAGAGGGTAATGCAATGGACCATTCTGTGAAATTGTCA ACTATGATTGGAGAGTATATGCTCGATTGGTATATGGATATCGTAGCGTA GGTCACCACTGGCGGTATCCAGCTCGGAAACAATCGGAATATGCAGGGCG AATAGAGCGTAGGTTCTCCATCTCCTAGTGAGTGGAAGGTAACTGGGGAC TTAAAAATGAGTCTTCCATTCAATATGAAGAATTCGAGATGCTTTGGGTA TAATTTTGGTCTCAAAGGGACCCAATGTAAGAGCAAAAATGTTAgggttt ttcttttaatttcttttgatcTTTTTTACCAGAATCTAATGGATAAATTA TTTGTAACTGTCAGCTTTGGAAAAAATTCGATTGATGATTCTGATTTTCA CGGTCGAGATAAATACGCTATTACAGGCTGTCTATAGTGTCAATATTTCC ATGCTGATGAGGTAATATGACTCAATAAATTTCACCAAAACTTTTATGCC TTTTATGCCTTTTTACTTATAACCTCTGTTGTTCATGCATTTTTACGGTC TTAGTAATTTCTTCATCTGCCAATCAAACTAAACtcaactgtcaatcaaa taaattAACACCAATCAATGACAGTATAGATCATGCCGCTCTATTTCTCG TGCCTCTCTCCAACCAAAATTTTTGTcatcttaattttaaacagtttaAG AGGAATTTTCGAGGAGATGTTAAATGAAAAAGGGAGTTTCTTTATTAATT CATTAGAAAGCAAACCTCTTCCCTGTCGGTTTACATGTGCATGAAATAGT AGCTTATGACTTCCCTATGAAAATATTATACTCATGCTGCTGATTTATTG CTTTGTTCTCTGTTCAGATGCACAAATCTACTTATTTTCACCAGTTCTGA TTTAAAGTACGCCCccgggggtactacccttgccgaccgacgagggtgct ccgctgaggttcgaaaaatggactcTACTTGGgattcgttttttcaaaaa ttttgccgaaatttgcgaaaaaagtgaccctttgaatgggactaaaattc caaaattttctcaaattttctactttttcctaaattttccaaaaaaggca cccttcgAGGAACTGatgtgtttttgcgaccctacctgggacttgtggag gttaaaaaaNttactttttccccaaattttccaaaaaaggcaccctacga ggaactgatttttctattttggtgtttttgcgaccctacctgggacttgt ggaggttaaaaaaggtaccctgaccagcggcgtatctccgtaacccattt tgccgtAGTACCCCCCTCCCCGGGGATACGCCtcgttttagaaaaaattc cttttggaaatatttaagaatattttaaagtaATCTAACTTTTGTAATGC CTTTTGCCTTCTGTAATGTTATAATACTCCCTCATTTCTTTTGATTTGCG ATGTATGTTAAGTAAACAGAAATGCggccaaacaaaagaaattgatgAAC AATAAACTTGTCAGCACCAAAACGCAAATCTCGTTAAATCTTAAAGGTTA AAATTAAGGGAaggaaaaaaaactgttttataaATTAAAACTTCATTAAA TAGCCTATTTCataattgatttttcttttcttttttccaaaaggTTTTTT TCAACTCGTTGCTTTGATGCGCCATCTTGTCAAAGAGTCATCTCAACCAA TTGACACATGTTAAAAGCGGACATAGGATCCAATCGTTAATTAATGCTTA TGATGTTCAAGATGTATAaaacccttcatatatttgtggTCGGCAGGAAT GACAGATTTTCTTTCGACATCTCAACTCAACCAAGTCAACTAAACATTAA GCACGACTCGAGACAGGATGACAGGCTTTTTGATAGACGATATTTTAAGC AAGAAAGTGGCCAAAGAAAATGAGACGATACATGTGAGATCAGCATTCCT CCCAACTCAATCTGGTAAATTGAATATCCACTGTGAAAGGAATATTATTT TTGTCCTTGCCAAATATATTCTCAAAATAAATTACgcctaaattttgatt ttttggcgCAATTTTATCTTCctcgatttttgaattttgaaagtaaacAT AATTACATTTTTATTTCAGATCACCATTGCAAACGTCTCTACGCGCCGCC CCTTCCGCCTTTGCTACCACCATCAAACCACCATTACCACCCTTATCATC GACATCACCGCTTCTATCGTTCCCGATCACCCCCGCCTGCTATTTCACCT CGTTCATCACACTCAGACGATTTGGATCTTGACAAACTTTCACGACGACC ACGGACTTCAATCACTATGTGCCAAAGAGAATTTCTGGAAACGGAGTTTC AGAAAGAAAGATACCCGACACTGGCGTACATTGACAAACTATCACGCAAA GTCCACTTACAACAATATGTCATAAAGGTAAGCCTCTCCCatattattca aaattaatGTGATGCACTATCTATCTTGTACGTCTTAcggtagtccgaca ctttcttgTCCGACAATAAAACATTCCGAAAACAATCGAAATGGAATCAG CCCGGAAGTATATTTACTCCGACTGCTCTTTTGTCCGAAGACAATCGcat attgttttttattattcaCGATTCGGACTTTGAAGACTCCCCGCGTTGTC ATGATTTTCTCAGGTGGGGCTAAAGATTCGTTCTATTTCATACGAGGTAG ACAGAAACAATTCTAAAGGTCTCTAGTGAAAGAGAACAAGATCAATCATT AAGTTTAGCTGTAAGTTTCCTGATAATGATTTTCTATAACCAAAGCTTCA ACTTATGATCGGTGGATCGGACGTCGGCTGTCGGTGGTCGCTTAAATTCC CTGACTGTTTCGTTAGCAATTGGTAGAGAAATCTACTTTTGGTGGAATTG TCATACTTGGCAACTTTTGGGTCTATTTTAACGAATTTCAACCCCTTTTT TCACGGTAATGATACAAGGGTGTTCCTAGGAAAAATTTTAATCTAGAAGA ACAAGCTAGTCGGAtaaagataaagatttttgttgtTCCATTTCAGGTTT GGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCACCGTCGAAAA CCTTCCAAAGAAGACACAAACACAAAACCTgagtattttacagaacgaAA AGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATTCTTCCGAAA AATACACACCAGCTTCAGCAACGAAATATAGTGGACGGTATCTCTATAAT GAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAATGAAATCATC TTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGATTGACCGATCTTC TATTGAATCGATTAATTGACTTCATATTGCGCTAATTAATGAATTCACTT ATTTACTGTTTTGTCGGAATCCTTATTCTCACTGACATTCAAAATAATCA TCAAGTTCATAATTACATGGGATGTTTAAATTTAGTTTCTAGTTGTGTAT TATAGATTGTATTATTCAATTATTGTATTAtataaattccttattttttt atcatatctttttgtttttcgttGCATTTTATTGAAGAGTATTTATTGGT TGTTGATATTTATTTGAGAATTtattcagaaaaagaaaattattactTGT TTACTATAAt

Coding sequence (CDS) from alignment at sc0000039:324990..332149+

>TCONS_00004025 ID=TCONS_00004025|Name=TCONS_00004025|organism=Clytia hemisphaerica|type=CDS|length=2088bp|location=Sequence derived from alignment at sc0000039:324990..332149+ (Clytia hemisphaerica)
ATGACAGGCTTTTTGATAGACGATATTTTAAGCAAGAAAGTGGCCAAAGA
AAATGAGACGATACATGTGAGATCAGCATTCCTCCCAACTCAATCTGATC
ACCATTGCAAACGTCTCTACGCGCCGCCCCTTCCGCCTTTGCTACCACCA
TCAAACCACCATTACCACCCTTATCATCGACATCACCGCTTCTATCGTTC
CCGATCACCCCCGCCTGCTATTTCACCTCGTTCATCACACTCAGACGATT
TGGATCTTGACAAACTTTCACGACGACCACGGACTTCAATCACTATGTGC
CAAAGAGAATTTCTGGAAACGGAGTTTCAGAAAGAAAGATACCCGACACT
GGCGTACATTGACAAACTATCACGCAAAGTCCACTTACAACAATATGTCA
TAAAGGTTTGGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCAC
CGTCGAAAACCTTCCAAAGAAGACACAAACACAAAACCTgagtattttac
agaacgaAAAGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATT
CTTCCGAAAAATACACACCAGCTTCAGCAACGAAATATAGTGGACGGTAT
CTCTATAATGAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAAT
GAAATCATCTTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGAATGA
CAGGCTTTTTGATAGACGATATTTTAAGCAAGAAAGTGGCCAAAGAAAAT
GAGACGATACATGTGAGATCAGCATTCCTCCCAACTCAATCTGATCACCA
TTGCAAACGTCTCTACGCGCCGCCCCTTCCGCCTTTGCTACCACCATCAA
ACCACCATTACCACCCTTATCATCGACATCACCGCTTCTATCGTTCCCGA
TCACCCCCGCCTGCTATTTCACCTCGTTCATCACACTCAGACGATTTGGA
TCTTGACAAACTTTCACGACGACCACGGACTTCAATCACTATGTGCCAAA
GAGAATTTCTGGAAACGGAGTTTCAGAAAGAAAGATACCCGACACTGGCG
TACATTGACAAACTATCACGCAAAGTCCACTTACAACAATATGTCATAAA
GGTTTGGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCACCGTC
GAAAACCTTCCAAAGAAGACACAAACACAAAACCTgagtattttacagaa
cgaAAAGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATTCTTC
CGAAAAATACACACCAGCTTCAGCAACGAAATATAGTGGACGGTATCTCT
ATAATGAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAATGAAA
TCATCTTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGAATGACAGG
CTTTTTGATAGACGATATTTTAAGCAAGAAAGTGGCCAAAGAAAATGAGA
CGATACATGTGAGATCAGCATTCCTCCCAACTCAATCTGATCACCATTGC
AAACGTCTCTACGCGCCGCCCCTTCCGCCTTTGCTACCACCATCAAACCA
CCATTACCACCCTTATCATCGACATCACCGCTTCTATCGTTCCCGATCAC
CCCCGCCTGCTATTTCACCTCGTTCATCACACTCAGACGATTTGGATCTT
GACAAACTTTCACGACGACCACGGACTTCAATCACTATGTGCCAAAGAGA
ATTTCTGGAAACGGAGTTTCAGAAAGAAAGATACCCGACACTGGCGTACA
TTGACAAACTATCACGCAAAGTCCACTTACAACAATATGTCATAAAGGTT
TGGTTTCAAAATCGGAGAGCAAAATATCGAAAAGAAGGGCACCGTCGAAA
ACCTTCCAAAGAAGACACAAACACAAAACCTgagtattttacagaacgaA
AAGAAAGCAAAGACGACAAAGTACATTTATTGAAAGTTCATTCTTCCGAA
AAATACACACCAGCTTCAGCAACGAAATATAGTGGACGGTATCTCTATAA
TGAAAGGAATTCAGCACAAACGTTGCTATGGCAACCTCGAATGAAATCAT
CTTGCGAAGAGCATTGTGGGTGCTTCACGTGTGGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002261XLOC_002261Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004025-proteinTCONS_00004025-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004025-exon-sc0000039-1491911889:324990..325388TCONS_00004025-exon-sc0000039-1491911889:324990..325388Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1510915933:324990..325388TCONS_00004025-exon-sc0000039-1510915933:324990..325388Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1575043694:324990..325388TCONS_00004025-exon-sc0000039-1575043694:324990..325388Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1491911889:330133..330453TCONS_00004025-exon-sc0000039-1491911889:330133..330453Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1510915933:330133..330453TCONS_00004025-exon-sc0000039-1510915933:330133..330453Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1575043694:330133..330453TCONS_00004025-exon-sc0000039-1575043694:330133..330453Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1491911889:330609..330916TCONS_00004025-exon-sc0000039-1491911889:330609..330916Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1510915933:330609..330916TCONS_00004025-exon-sc0000039-1510915933:330609..330916Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1575043694:330609..330916TCONS_00004025-exon-sc0000039-1575043694:330609..330916Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1491911889:331536..332149TCONS_00004025-exon-sc0000039-1491911889:331536..332149Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1510915933:331536..332149TCONS_00004025-exon-sc0000039-1510915933:331536..332149Clytia hemisphaericaexon
TCONS_00004025-exon-sc0000039-1575043694:331536..332149TCONS_00004025-exon-sc0000039-1575043694:331536..332149Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:324990..332149 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.41761 7.79807 1.65388 0.959869 1.20194 1.00255 1.84613 2.4435 1.73161 1.7831 1.07856 1.35205 4.9232 4.17231 1.39176 1.40306 3.28963 3.35272 6.42158 6.74726 4.90711 4.41341 4.6838 5.72929 4.41248 6.68991 12.1193 6.73876 2.47312 2.82768
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004025 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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