transcript:BL74025_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL74025_cuf0
Unique Nametranscript:BL74025_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL74025_cuf0

>transcript:BL74025_cuf0-protein ID=transcript:BL74025_cuf0-protein|Name=transcript:BL74025_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=207bp
EHLIQSGCRGIQVGDVEIVSLMFADDLALCADSVIGLQRVLNALNTYCNK
WQLTVNLVKTKVMVFRNGGKLRRTERWFYAGSKVEVVSTYKYLGIIISSS
GNWFKAQETLAGQASKAIFILKKRIHKFGVLSPQLVFKMFDTMILPIMMY
GSEIWGFHPCKQLDIVHNKFCKFYLGLGQSTPNIAVLGELGRYPLSTLRH
IRIIKFW
Run BLAST on NCBI

mRNA from alignment at Sc0000147:683531..684152+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL74025_cuf0 ID=transcript:BL74025_cuf0|Name=transcript:BL74025_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=622bp|location=Sequence derived from alignment at Sc0000147:683531..684152+ (Branchiostoma lanceolatum)
CGAACATTTGATACAAAGCGGTTGCAGAGGTATACAAGTAGGAGATGTGG
AAATTGTAAGCTTGATGTTTGCAGACGACTTAGCGCTGTGCGCTGACTCA
GTAATAGGCCTCCAAAGGGTCTTAAATGCATTAAACACATATTGTAACAA
ATGGCAGTTAACAGTAAATTTAGTTAAGACTAAAGTAATGGTGTTTCGAA
ATGGGGGGAAACTTAGACGGACTGAGAGATGGTTTTATGCTGGGAGTAAA
GTAGAGGTAGTAAGCACCTACAAATACTTAGGTATAATAATCTCATCAAG
TGGTAATTGGTTTAAAGCACAGGAGACTCTTGCAGGTCAGGCTTCTAAAG
CAATTTTCATATTAAAAAAGAGGATTCATAAATTTGGAGTGTTATCACCA
CAACTAGTTTTTAAAATGTTTGACACTATGATTCTTCCTATCATGATGTA
CGGAAGTGAAATATGGGGTTTTCACCCTTGTAAACAATTAGATATAGTTC
ATAACAAATTTTGTAAGTTTTACCTAGGTCTTGGACAATCCACACCAAAC
ATCGCAGTATTGGGGGAACTGGGTAGATATCCACTGAGCACCCTTAGACA
CATTAGAATTATTAAGTTTTGG

Coding sequence (CDS) from alignment at Sc0000147:683531..684152+

>transcript:BL74025_cuf0 ID=transcript:BL74025_cuf0|Name=transcript:BL74025_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=621bp|location=Sequence derived from alignment at Sc0000147:683531..684152+ (Branchiostoma lanceolatum)
GAACATTTGATACAAAGCGGTTGCAGAGGTATACAAGTAGGAGATGTGGA
AATTGTAAGCTTGATGTTTGCAGACGACTTAGCGCTGTGCGCTGACTCAG
TAATAGGCCTCCAAAGGGTCTTAAATGCATTAAACACATATTGTAACAAA
TGGCAGTTAACAGTAAATTTAGTTAAGACTAAAGTAATGGTGTTTCGAAA
TGGGGGGAAACTTAGACGGACTGAGAGATGGTTTTATGCTGGGAGTAAAG
TAGAGGTAGTAAGCACCTACAAATACTTAGGTATAATAATCTCATCAAGT
GGTAATTGGTTTAAAGCACAGGAGACTCTTGCAGGTCAGGCTTCTAAAGC
AATTTTCATATTAAAAAAGAGGATTCATAAATTTGGAGTGTTATCACCAC
AACTAGTTTTTAAAATGTTTGACACTATGATTCTTCCTATCATGATGTAC
GGAAGTGAAATATGGGGTTTTCACCCTTGTAAACAATTAGATATAGTTCA
TAACAAATTTTGTAAGTTTTACCTAGGTCTTGGACAATCCACACCAAACA
TCGCAGTATTGGGGGAACTGGGTAGATATCCACTGAGCACCCTTAGACAC
ATTAGAATTATTAAGTTTTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL74025gene:BL74025Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL74025_cuf0-E1BL74025_cuf0-E1-1564476830-346714Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL74025_cuf0transcript:BL74025_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000147genomeSc0000147:683531..684152 +
Properties
Property NameValue
Transcript idBL74025_cuf0
Biotypeprotein_coding