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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95793_evm1 >transcript:BL95793_evm1-protein ID=transcript:BL95793_evm1-protein|Name=transcript:BL95793_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=205bp
MATAAVPEFDDLEPMDFQEEMLGSSNSSIADTKFDVTVGYIEEIIMDDEF
QDLQNNFLDKHYIEFEDTEENKFVYTDIHKEWVDTIEKYLETNLARKMPG
FHMHEFAQALESRKDEVCGEIFDMLVSFTDFLAFKELMLDYRAEKEGRSI
DLLEDLVITSMSKPAGGPAAAGAVGGGSRQGSTQPQLAVQPATGGSKHSS
KHRVK Run BLAST on NCBI mRNA from alignment at Sc0000123:560756..564664+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95793_evm1 ID=transcript:BL95793_evm1|Name=transcript:BL95793_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3909bp|location=Sequence derived from alignment at Sc0000123:560756..564664+ (Branchiostoma lanceolatum)
ATGGCGACCGCAGGTAAGATGATTTTCCGTTTGTTTACCTGTTGTTACCA
GAGTATTGAACTTCCTACGTCTTTTACAATGGGTTTAGACTAACTTAAAC
AGATTCAAATCGTACCAAACAAGCGACAAATTTGTAAGAAAGCTCAATTG
GGTTTGTAAATCAGAAGGATTTCCATTCAGCAATCGATGAATCATGTCTG
AGCTGTGCACAGGTGTGTGCCGTTCGAACAAAATCATATAACGATCGGGT
GTAGAGTGTCACTTTAAAACAATTAACCTGTCAACAGTGACAGCTACCGG
CATTTAACTGTCCACTGGTCATCTTAAGGTTCAGCAGATACAGTCTGTGT
TTGCAGAAGAGCCGTAGACAAGATTTTCCTCACGTCTTCGAAGAAGAATA
TAATTTTGTCCCCTTTTCAAATCCTATCTATCGACACGCAGTTACAGTAA
AGGTAAAAAAGTTTTTTTTCCCGTTGAAAGTCGTCGCCACCAGTCTCTTA
TGTCCCTTCTCCGCCTCCCTACAGCTGTACCAGAGTTTGACGACCTTGAA
CCCATGGACTTCCAGGAGGAAATGTTGGGGTCTTCCAAGTAAGAAATCTT
TCTTAAGTTAAAGTTAAACAGAAAAGAATAAGATAAAGTAAATATGACAA
GATAACATAAAATTTACCTTTGTTGAATTTGATAATTGATTCATTTTGGC
AAAAAATGCATGCCATTGCCATACTGTTAAGTGCACAGTGTTATTATTGA
ATTGTTTTATATTCTGCAAGGAAATAGAAGTACATTATTCTTTGTAGAGT
ATTTTAGTCCACCAGCAAATTGCCCACTGTAAAGCTTTGTCTGCACATGT
ACATATTTTTGTGTTGCCTGTTGAAATTTGAAGTTCATATTAAATCCTTT
CACTTGCAGCTCTAGTATAGCAGACACAAAGTTTGATGTGACAGTCGGTT
ATATTGAAGAGATCATCATGGGTAAGTTTCTTTCTCATTCACATATGAAT
TATTAATTCAGCATTATCATTTTCTACTCCCATTGGGCCATTTATGGCAA
TTTCATTCTGGTTCTTGGGTTCTAGATACACACTAATAGCATATACCGTG
TAATGTGGAAAGGTGCAAAGTAAAAAGATCAGGACTAGGTAATGAATTGG
ATGTTGAAAGACAGATCATGCCATGAGTCTGGGACACAGTACATGTATAT
ACAAAGACAACTGAGCCCTCAAGGCCACATATTGTTTGTACCAGCGCAAA
ACCTAAAATTTTGTACATTACGGGCATGGTGCACATGATGTTCAGCTGTA
TGGCCTCTCATCTATGAATTATTGAGGAGTTTATTGACATATTAATAAAC
AGAAGCTCATCAAATCACATTTTGGCTTTTGTGTCATTTGAACAGTTGTT
TGTTATGATATTCATGCTGTTATTATTTTGTTGCTATAAAAATGTTGGTA
ACATTTCCAAGATCCTTGTTATATTCTTCATATCTTTTCACAGATGATGA
GTTTCAAGACCTGCAGAACAATTTTCTGGACAAGCACTACATAGAGTTTG
AGGACACAGAAGAGAACAAGTTTGTGTACACAGACATTCACAAGGAATGG
GTATGTTTATGCAAGGAGGTTATAGACATGGTATCTGTATCTGTATCTAC
ATAGCCAGTATATCCGCCCCTCTGCGAAAAACACCAGGTTCGCAGGTAAG
CAGCGTGGCAGCAGCTGGTTATATTACACTGAACAACTTGTCTCACATAA
CCATTGCACAGCTAACTCCATGCATTGTTTAAAGCTATCTAGTGAGGATG
CTCCTACAGTACCTGATGACACTGACAATTGTGTATACTTGATGATGATA
GATCATGACATAGATGGTTGTCATTTAGTCATTGATACCACTCCATCTCT
TACTAGTCTTAGGCATAGTGTATGGCCCTAGATGTACATGACCTTGTTTC
AGAAGGTATTCAGTTAGTGTTACTGAAGTGAATTGCCACACCCTGTCAAA
GTGCCATCATTTTCCTATATGTTCCTTTCAGGCATGCATAAGTCATGAAT
AATTAATCAGGCTATCATTGCTGATGCTAGGCATTTCATTGCCCAGGCCT
TTGATGTTAGGCAGTTCATTATTTATTAAGACTCAACCAAACTGCAATTC
TATTGATAATCAATGATTGTCATACCTACTCGAATAACTTTTTTAATTCT
AAGATCAGTCCTGTGTTTTTCTTGAGAATATTTCTTTTGTATAAAAGGTC
ATCATAAGATATCCTTAAAATGTGAATTGTGCAGTGAATGTTTCCATAAG
CAAGTAAGCCCGAGGGACCCTAATGCTAATGGTTGATGACTTGATTTCTG
CCACAGGTTGACACAATAGAAAAGTACCTTGAAACAAACCTCGCCAGGAA
GATGCCAGGGTTCCACATGCATGAGTTTGCACAGGCACTCGAGTGAGTTT
GCTTTCTTCAACTTCTTGTATGCTATGGTGTCACTTAAATCAAAAGGTTG
ATGAAGGCTTTACTACAGCAGAAAGTAAAGTTGTAAAAAAAACAGACAAA
AAAGTCAGAAATAATTCAAAGTACATTGAATACTTGTATGTTTGAATTTC
ATTTCATCAAAAGAGAAGACTTCAAATATGCTTTAGGGAATAATATATTC
TAAAGTGTTCCAATGACTGGTTTGAGGTCATCTTCCCATTTGTCCGGGTA
AGGAGGTTATAACCTCCTTGGTCTAGGCAATAACCTCAAATGAAGTATGC
ACCCCAACATTGGCAACGACTGGCAACACCTTTTGGATTTTGTGCATACT
TTAATTGGGAATTTACAGTCAGAAGAATACATCAATTTTATAGCCCAGTA
ATTAGGATTTCTCCACTAATATTTTTACAGGCCTTCGGGCCTAAAGGTGT
CAAAGTGAGAAGAAGAAGATTTGTGATATATGTTTCAGGTTGTTTTGAAT
AAGATATAGAATATACAAAGAAAGATTGCATTGGTAGGTTCAATTTCTTC
AGCAGGACAAGATTACGCTCAGTTAAACACCTATACCCTGGGTCATGTGT
GTTTCACAGGTCCAGAAAAGACGAGGTTTGTGGGGAGATCTTCGACATGC
TGGTGTCCTTCACCGACTTCCTGGCCTTCAAGGAGCTCATGTTGGACTAC
AGGGCGGTAAGCAGTCCCAGTTGTTCTCATGAAACATTTGTTCTTATGAA
ATGACCAATGTTGCAGGGATCTCCCTAAAGAATGCAACAGTGGCGCTCCT
CCATCCTGTTCTCATCCCAGCTTCATCCTGTTGATTTTCATTAATTGTAG
ACAAGATGTAAAGCTGAAGTTGCAGGAAATGACTTCCATTTGTGTCTGGA
AAAGGCAAAATGCAACAGACCTTCCAGACACACATCTTACATGCTTGGCA
CCCTCCCCCATCCTGCTCTATATTTCTGGGGAGATCCCTGAATTTTGATT
GTGATATGAACATAAAAGCCTCAAACAGTCTATGGAGCTTAATTTGCTCT
CCAGAAAAGCACCTGGAAAAGTTGAGTTGACATGCTGGATAAAAATGTTT
CCCAGATAGAAATATGTTCTCCTATAAAGTGAGGGTATGGTTTTAAGGGT
GTCATGATAGGTTGGTCCCCAATGGTAGTTTTGGTAGTGTAGCTCCTTAA
TAGAAATGACATGAAACATTGTGGATTGCCTGCATATGTGACTGAATAGT
AAGTATTCTATCCATGACAGGAAAAGGAGGGTCGGTCAATAGATCTGCTG
GAGGATCTGGTGATCACATCGATGTCCAAACCCGCCGGGGGACCAGCAGC
AGCAGGAGCTGTGGGAGGAGGCAGCAGGCAAGGCAGCACACAACCACAGC
TAGCCGTACAACCTGCCACAGGGGGCTCCAAACACTCCAGTAAACACAGG
GTCAAATAG Coding sequence (CDS) from alignment at Sc0000123:560756..564664+ >transcript:BL95793_evm1 ID=transcript:BL95793_evm1|Name=transcript:BL95793_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4326bp|location=Sequence derived from alignment at Sc0000123:560756..564664+ (Branchiostoma lanceolatum)
ATGGCGACCGCAGCTGTACCAGAGTTTGACGACCTTGAACCCATGGACTT
CCAGGAGGAAATGTTGGGGTCTTCCAACTCTAGTATAGCAGACACAAAGT
TTGATGTGACAGTCGGTTATATTGAAGAGATCATCATGGATGATGAGTTT
CAAGACCTGCAGAACAATTTTCTGGACAAGCACTACATAGAGTTTGAGGA
CACAGAAGAGAACAAGTTTGTGTACACAGACATTCACAAGGAATGGGTTG
ACACAATAGAAAAGTACCTTGAAACAAACCTCGCCAGGAAGATGCCAGGG
TTCCACATGCATGAGTTTGCACAGGCACTCGAGTCCAGAAAAGACGAGGT
TTGTGGGGAGATCTTCGACATGCTGGTGTCCTTCACCGACTTCCTGGCCT
TCAAGGAGCTCATGTTGGACTACAGGGCGGAAAAGGAGGGTCGGTCAATA
GATCTGCTGGAGGATCTGGTGATCACATCGATGTCCAAACCCGCCGGGGG
ACCAGCAGCAGCAGGAGCTGTGGGAGGAGGCAGCAGGCAAGGCAGCACAC
AACCACAGCTAGCCGTACAACCTGCCACAGGGGGCTCCAAACACTCCAGT
AAACACAGGGTCAAATAGATGGCGACCGCAGCTGTACCAGAGTTTGACGA
CCTTGAACCCATGGACTTCCAGGAGGAAATGTTGGGGTCTTCCAACTCTA
GTATAGCAGACACAAAGTTTGATGTGACAGTCGGTTATATTGAAGAGATC
ATCATGGATGATGAGTTTCAAGACCTGCAGAACAATTTTCTGGACAAGCA
CTACATAGAGTTTGAGGACACAGAAGAGAACAAGTTTGTGTACACAGACA
TTCACAAGGAATGGGTTGACACAATAGAAAAGTACCTTGAAACAAACCTC
GCCAGGAAGATGCCAGGGTTCCACATGCATGAGTTTGCACAGGCACTCGA
GTCCAGAAAAGACGAGGTTTGTGGGGAGATCTTCGACATGCTGGTGTCCT
TCACCGACTTCCTGGCCTTCAAGGAGCTCATGTTGGACTACAGGGCGGAA
AAGGAGGGTCGGTCAATAGATCTGCTGGAGGATCTGGTGATCACATCGAT
GTCCAAACCCGCCGGGGGACCAGCAGCAGCAGGAGCTGTGGGAGGAGGCA
GCAGGCAAGGCAGCACACAACCACAGCTAGCCGTACAACCTGCCACAGGG
GGCTCCAAACACTCCAGTAAACACAGGGTCAAATAGATGGCGACCGCAGC
TGTACCAGAGTTTGACGACCTTGAACCCATGGACTTCCAGGAGGAAATGT
TGGGGTCTTCCAACTCTAGTATAGCAGACACAAAGTTTGATGTGACAGTC
GGTTATATTGAAGAGATCATCATGGATGATGAGTTTCAAGACCTGCAGAA
CAATTTTCTGGACAAGCACTACATAGAGTTTGAGGACACAGAAGAGAACA
AGTTTGTGTACACAGACATTCACAAGGAATGGGTTGACACAATAGAAAAG
TACCTTGAAACAAACCTCGCCAGGAAGATGCCAGGGTTCCACATGCATGA
GTTTGCACAGGCACTCGAGTCCAGAAAAGACGAGGTTTGTGGGGAGATCT
TCGACATGCTGGTGTCCTTCACCGACTTCCTGGCCTTCAAGGAGCTCATG
TTGGACTACAGGGCGGAAAAGGAGGGTCGGTCAATAGATCTGCTGGAGGA
TCTGGTGATCACATCGATGTCCAAACCCGCCGGGGGACCAGCAGCAGCAG
GAGCTGTGGGAGGAGGCAGCAGGCAAGGCAGCACACAACCACAGCTAGCC
GTACAACCTGCCACAGGGGGCTCCAAACACTCCAGTAAACACAGGGTCAA
ATAGATGGCGACCGCAGCTGTACCAGAGTTTGACGACCTTGAACCCATGG
ACTTCCAGGAGGAAATGTTGGGGTCTTCCAACTCTAGTATAGCAGACACA
AAGTTTGATGTGACAGTCGGTTATATTGAAGAGATCATCATGGATGATGA
GTTTCAAGACCTGCAGAACAATTTTCTGGACAAGCACTACATAGAGTTTG
AGGACACAGAAGAGAACAAGTTTGTGTACACAGACATTCACAAGGAATGG
GTTGACACAATAGAAAAGTACCTTGAAACAAACCTCGCCAGGAAGATGCC
AGGGTTCCACATGCATGAGTTTGCACAGGCACTCGAGTCCAGAAAAGACG
AGGTTTGTGGGGAGATCTTCGACATGCTGGTGTCCTTCACCGACTTCCTG
GCCTTCAAGGAGCTCATGTTGGACTACAGGGCGGAAAAGGAGGGTCGGTC
AATAGATCTGCTGGAGGATCTGGTGATCACATCGATGTCCAAACCCGCCG
GGGGACCAGCAGCAGCAGGAGCTGTGGGAGGAGGCAGCAGGCAAGGCAGC
ACACAACCACAGCTAGCCGTACAACCTGCCACAGGGGGCTCCAAACACTC
CAGTAAACACAGGGTCAAATAGATGGCGACCGCAGCTGTACCAGAGTTTG
ACGACCTTGAACCCATGGACTTCCAGGAGGAAATGTTGGGGTCTTCCAAC
TCTAGTATAGCAGACACAAAGTTTGATGTGACAGTCGGTTATATTGAAGA
GATCATCATGGATGATGAGTTTCAAGACCTGCAGAACAATTTTCTGGACA
AGCACTACATAGAGTTTGAGGACACAGAAGAGAACAAGTTTGTGTACACA
GACATTCACAAGGAATGGGTTGACACAATAGAAAAGTACCTTGAAACAAA
CCTCGCCAGGAAGATGCCAGGGTTCCACATGCATGAGTTTGCACAGGCAC
TCGAGTCCAGAAAAGACGAGGTTTGTGGGGAGATCTTCGACATGCTGGTG
TCCTTCACCGACTTCCTGGCCTTCAAGGAGCTCATGTTGGACTACAGGGC
GGAAAAGGAGGGTCGGTCAATAGATCTGCTGGAGGATCTGGTGATCACAT
CGATGTCCAAACCCGCCGGGGGACCAGCAGCAGCAGGAGCTGTGGGAGGA
GGCAGCAGGCAAGGCAGCACACAACCACAGCTAGCCGTACAACCTGCCAC
AGGGGGCTCCAAACACTCCAGTAAACACAGGGTCAAATAGATGGCGACCG
CAGCTGTACCAGAGTTTGACGACCTTGAACCCATGGACTTCCAGGAGGAA
ATGTTGGGGTCTTCCAACTCTAGTATAGCAGACACAAAGTTTGATGTGAC
AGTCGGTTATATTGAAGAGATCATCATGGATGATGAGTTTCAAGACCTGC
AGAACAATTTTCTGGACAAGCACTACATAGAGTTTGAGGACACAGAAGAG
AACAAGTTTGTGTACACAGACATTCACAAGGAATGGGTTGACACAATAGA
AAAGTACCTTGAAACAAACCTCGCCAGGAAGATGCCAGGGTTCCACATGC
ATGAGTTTGCACAGGCACTCGAGTCCAGAAAAGACGAGGTTTGTGGGGAG
ATCTTCGACATGCTGGTGTCCTTCACCGACTTCCTGGCCTTCAAGGAGCT
CATGTTGGACTACAGGGCGGAAAAGGAGGGTCGGTCAATAGATCTGCTGG
AGGATCTGGTGATCACATCGATGTCCAAACCCGCCGGGGGACCAGCAGCA
GCAGGAGCTGTGGGAGGAGGCAGCAGGCAAGGCAGCACACAACCACAGCT
AGCCGTACAACCTGCCACAGGGGGCTCCAAACACTCCAGTAAACACAGGG
TCAAATAGATGGCGACCGCAGCTGTACCAGAGTTTGACGACCTTGAACCC
ATGGACTTCCAGGAGGAAATGTTGGGGTCTTCCAACTCTAGTATAGCAGA
CACAAAGTTTGATGTGACAGTCGGTTATATTGAAGAGATCATCATGGATG
ATGAGTTTCAAGACCTGCAGAACAATTTTCTGGACAAGCACTACATAGAG
TTTGAGGACACAGAAGAGAACAAGTTTGTGTACACAGACATTCACAAGGA
ATGGGTTGACACAATAGAAAAGTACCTTGAAACAAACCTCGCCAGGAAGA
TGCCAGGGTTCCACATGCATGAGTTTGCACAGGCACTCGAGTCCAGAAAA
GACGAGGTTTGTGGGGAGATCTTCGACATGCTGGTGTCCTTCACCGACTT
CCTGGCCTTCAAGGAGCTCATGTTGGACTACAGGGCGGAAAAGGAGGGTC
GGTCAATAGATCTGCTGGAGGATCTGGTGATCACATCGATGTCCAAACCC
GCCGGGGGACCAGCAGCAGCAGGAGCTGTGGGAGGAGGCAGCAGGCAAGG
CAGCACACAACCACAGCTAGCCGTACAACCTGCCACAGGGGGCTCCAAAC
ACTCCAGTAAACACAGGGTCAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000123 | genome | Sc0000123:560756..564664 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95793_evm1 |
| Biotype | protein_coding |
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