transcript:BL89488_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL89488_cuf1
Unique Nametranscript:BL89488_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL89488_cuf1

>transcript:BL89488_cuf1-protein ID=transcript:BL89488_cuf1-protein|Name=transcript:BL89488_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=123bp
MARIPPGLIINPAPGVRYKVPAVKKLTKELILKDKVKFQKNRLGAATCLT
EMSLMMACWKENDFKDSACAKEITAFHKCTEEATKERRGVKEADLKGVVQ
EGRLTSRNINKLLQRFPHPVKPH
Run BLAST on NCBI

mRNA from alignment at Sc0000093:25658..39998-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL89488_cuf1 ID=transcript:BL89488_cuf1|Name=transcript:BL89488_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=14341bp|location=Sequence derived from alignment at Sc0000093:25658..39998- (Branchiostoma lanceolatum)
CTGCGGAAACGCAGACCACAGTATTTCACCCAAAGTGACAAGCTTCGACG ATTCAAAATTTATACCCGAACTACTATTGGAAACGGGGGTCGCGGATAAA TACTTTGTTCTGCTAACTTAACGGTGATTTTAGGAGGAACTGTAATTGGT TTATTAAATATAACGTTCTATTNATTGGTTTATTAGATATAACGTTCTAT TGCGAAAGGTTTTGGGGAATGATTTCATTGGATTTGCCCATTGTGTTCAT GAAGTGTCTGGTAAACTAGTCTGCGATTTTCGACACAGCCGGACGCTGCC GTTTCATATTTTAAAGTTGGTCAACTTACATTCTATAATGTATGGTATAA CATACTATGATACAACAAAGTCAGACACAGTTTACTGACGCATGTATGTT TTTCTCTATGTTTTTACCATGTATTTGCAATTAGCCCACGGGCATGAACT TGCAATAAACTTCTATATATAATACGAGGCTGGTAGAAAAACAAACGCAA TTTTTATCGTAGCAGGTTCATTTTTGTACGAAAGGAGTTAAAATTGGGCA CAAATTTAAAGGAACATCAATTCTTGAGACTGAAGTATGCCACAGTATTT TTCACATTTTTATCAGCGACGAAATATTTCCGTAAAGAACGCCTGTTAAG TCCAGCCAACACACTTAGTATTTTAAGAGGAATTTTATCAACTACTTTAC ACCTGAACTATGAACGACACCCCCAATATGTGTCTAGTTCAGAAGGAATG ATATTTTGTGATATATATGATGGGCTTCTATATTGTTTTTGAATTGTGAA GTTTGTAAGGAACAATTCATAGCACTAGCTATTGATTTTTTTAATGAATA ATGTAGATACCTACATACTAGCATTCAAAAACGTATCTGTCATAAAATGT TTCAGCCTTTTGTCCAACGTGGACTTCGTGACTTTGAGAGGTCACCTCAG CAAGGTCGCGTGTACTCCGTACGAACCCCCGGGTCGAGGCTGGAAGTTGG CGGTGACGAAGTCAACGGTACCTGGTACATCAGCCAGGTTCACGAGCCGT GGGAGGGGATCCCTGGATAAACTACTGGGGCCACAAGTTGGAGCAGTATC TCACAGCAGGTGATTACAAGACAAAGCGGGCTGGAAGGAGGACTGTACTT ATTTGAACATATTTAAGCGAAGACAATTTTACGGGATTTGTTGTGTTTTT TTTGGTATATTTTTTGTGTGTGCGTTTGCTGCATGGGGGGGGGGGCTTGA AAGCGGAACACGTTTACTAACTTGCATAATTCATGTAAAAGCGCCATAAT TAATCTAAGTGGTAAATGATTGGAATATTACGACATTGTCAATATTACGA CATGTGTAAGTTAGTTAAAAGTCTACATGACCTCGCATAGATTACATAAA TGTGGAAGTCATTTGCATAATCAGAATAGTTCATGGAGATATGAGGTCTC CGAACTCTTGTGAGAAGTTGTGGTTGTGAGTTGGTCAGCGCTGTTTGCTT CAGGTCGGCTGCGCCAGCCGACTGTTTTAAAGTGTATAAAACATTTGGAT GTGATCATGTGGACGGGAGGCTTGAAAAGAGCTAGGAATTGGTTGAGAAC TGGTCAGTGGCTGGTGCTTCGGAGCAAGGTAGAAGCCGGGGGTGATAGGA GTCAACTCTGACTCCCAACCACGCCACAACCACTGCTGACTTATTCCCAG CTAGTCCCCAACCTACCCATGAGTCACTCCAGATCCTTTAACGAATCTCT GCTAACTCATTCCCCATCGAGGCGACTTCTGCCAGAGCGCGTGGCTTCAG ACGCATAGAAATTTACAACGATGATCCTCTTCAACGTGTAAATACCACCT CCCGCCATCAACTAGAAACATCCAAGTCTTACATATCTCATTGTCCATTG TCGTTAAGAAGTTGCAGACACTCGGCTGGGTGCAGTCGTACCTGGCCTGG TGGGCGTGCCGAGAAGCGCAGTGTGTACAATCTGGTACATAAATCATCGA TCGTCAACGTTACAGTCAGTTTGTCAAACTGGTTTCTAAGTTTCAACGTG TGAATTACGCAGGGGTCTCCACACACCTTTCTTTCCGAGTGGTACATCGC TGCTGCTGACTGTTAACGAGCGAAACCCTGCAATTTGGCAATGCAAATCA TTGATCAGAAGCAATAGAAATAATTCGAGGTTATACATTTGTAGAAGTAG TCATAAGTAGTCAAAGTAAATAGAAATAACCAGAAGTCATAGAAGTAATA GGGTTATGAAAAATAATAGCAACACTAGAATTATTGAGAAGTAAAAGAAG TGATAGAAATATTGAGAAATGATAGCAGTAATAGAAGTGATCAGAAGTAG TCAAAAGATCGAGATCAAAAGTAACAGAAGTAATCAGAAGTTATAGAAGT AACGAGAAAGGATAGATCTAATACAAAGTAATCAGAAGTTAAAGAACAAA TAGAACTATCTAGAAGCAAACGTAATAGAAGTGACCAGAAATGATAGAAC TAATCCGAAGTAATCAGAAGAAATAGAAGTATTCAGAAGAAATAGAAGTG ACCCGAAGTTCTTGACCTTCTTCTCGCCAGCCCCTAACCAATTTCCTGTG GATCCATCCACACCTTCATGAGCTATGCGATCTACCAACAAGTTCACACA AACCGCACCGAAAACATACCCTTCCTGGCGAAAGTAATTGATGTACTAGT ATTTGTTACCGTTGGCGTGAAGTGTTAATGATCATCTCTTTCTACGTTAC ATATTGCTATCTTGCTTTCATAGAACACAATAAATATGATATGGAATTTT CTCATCAGCTATGCAACTTGGGTTGATTAATAGATTCTTGAAATACTTGT TCCCTGCCCTGTACATGTACTACATGCATGCGCGCACACAAGCAGACAGC TCTAAAATTTCATGCAATTAGGTTACCCAACATTGACGTAGGCTAGGCCG ACTGACCGGGTCTTTTGGGAGGGGCCCGTTTAGACCCTGGAAGCGAGAGA TGTTGTACATATATACTTGTACTACTTTCAGGATGGGGTGTCGGTCTGCA ATGCTGCAGTACCTGATTATACTGCCAGGGGATCAAAATCGCCATGTTTC CTTGGGACGGCTCAGAAACATACATACATACCGAAAATCATACAAATCCA TCGATCAGGATCTTGCGAACAGACATACACAATCAAAACCAGTACCCCCG TAGGAGGTGAGTCTTCCCGGAGGTAAAATCAGTGACGTGTGCAGTGATAC ATGGATGAACAAATACACGGAGTAGGGGCACTCGATTGACCTTCACTTTC CATGCATGAGGGTGACTCGATGTCACAATCTAGCCAGAGGTCTTCAGTCC GACATAAGGACATTTTACCAAATAAACCATGCCCCATTTCAAGCCAAACG AACACAACCTACCGCATGCAGTGTAATGTTTGTCCGTTGTGATGGGCCAG GCCTCCGGTGAACCACAGCTCGATCCAGGGTATAATCAACCTATTCCAAC CAATATCCATCAATTTTCTTCCTTTATTGCTGGCTATTTCGCTACGCCTA GATTACCCAATTTTCGTCTGCCCGACCGATAATGTCAAATTGAGTCACAA TGGGGCCACTTCAGGGGCGCCATTTCAGCCATTAGACCAAAAACCAATAA CACGCTCTACGTCATCAGTGGACGGCTTATCACACAAAACGTGTTCATGT GAGCCTCTTATATTGTTGTTAAGGACTAGGGAAAACGTCGTGTTTTCGGT AACAGTCCGGAAAAAAATAGGATCGGTAGGTAGGGATCTGTTTTTGAGAT TTCGGCCGAAATGTTCAAACAAATACAGTTTAGCATGTAAAATTGCCATG CACCGGTCGCTGGTATTTCTAACATCATATTGAAATTATACAGAAACACA TCTTACAAGCACATCAATAAACTGAACGAAGAGGTACAAGATTTATCACA TATTCATACATCAACTGTTCAAAGCCCATATCAAGGATGAAATACAGTGA GTCTGTTTTGAATTTCATCACGCAGATGTCAGGTCGACAATTTTATGTAC CTTGCCAACGGCCGACCCAAAAAAAGCTAGACAGGTTTTGCTAGGGTCGG TCGGCGTCGGGTAACCGGAAACAAAACATTTTTCCGAGGCCTAAAATTCC AGTACGGTACTATCAAATCTTGCTTGCAGAGGTTTCACAATTTCTTGGGG GAAATAATTTGAATTCATACATACATACAACAGACGTACTCTCTGACAAG AAGAGACAAAAGCACAGCACGATTTTTATTCCTAAACCTTGCTTCGCAAT CAACATACGCCTTCTTCAAACACATGGAACACTAGGAACAATAATAAACA ACTCACGCGAACCATTGATCTATATATAAAAATACATAACTCTTCTCAGT AACTTCAAGACATAAATCTTGTATAAACTCGTATATTCAACTCCACAGAA GACAAACAGAACTGTTAGGAATGTTAACTGTGTAAAAACTGAAAACAAAT ACTAACATCACTGCAGTAATTTTAAAGGCCGATCAATCTTGAGCTTATAT ACAGGTTTTGCTAAGCAGAGGTAGGTATAGTCACGTTGTGCTTAATTTTA GAACAATGGGAACTCCGGTGAGGCTTCTAGTGCTCTTGTGCATATATGAT TGATATGTTTTACATTGACATTATTTCTTAATGATATGTATTGACACCAC TTTACGAGCTTCCTGTCTCTGAGCACCGTTCAGACTGGGTAGACATCCAT TATTCAAAAGCAATTAGAACATTACAAGAGGTGAACGCGTGCAAACGGCG GTCAACATTCTAAACCTATGCTCCTCTACTCCTTAGGTGAGAATAATACT AGGTCACACACCAAACTTTATCACACTTTTCATCCAAGATCTGGTGGAAG ACAAAATCATTATTGTTCACACCCTCAACTCTTATCAAGAAGCATACCTT AACTCTACATATGGTATGCTTTCCTGTTTCGCCATACATGTTAATAGGCC TGGAACAGTAGACTTAATGCAACGTCTTTTCATGTAACGTTTTTCTTACA CTATTCATATACAATCAACATGCACATGTGTTTGGCACACATAGTCTGGA ACTAGCTTCCATATTTGGCTGTTTTGACATTGTAGCATAGAACTAAAAGC GTATGTTGCAAAACTAGAACATACGGCAGCTGGCAAGAAATATAATTATA ACGAGTGCAAACCTAATTTCTAAGCAGATGTGAAACTTGGTTGTATTGTT CCATCTGTCATAACAATGAAAAAGACCGTACCAACAAAATGACATGTAAA GAGAGCCAAATTACATCACATCTGCTTGGAGAATAGACATTTCATATAGT TTGACACTGGTTGACTCTCTTACACAATGCCACACGTCATAGCTACAGAA TGAATATTGGCCCTGCATGGTATACTTCTTGTGCATTACACAAAGTCATT CGACACCAGGTGATTGAAGGGTTTGTTCTCTGAATACACATGTTGAGACA GGTTTGACCTTCTAAATACCAGCCTGGAGTACTTGAGTACAGCGGGGTAC AGCGGTTGGAGCGCAGTAAAAGAGTCCGAGAGCACGCTCAATACAGGACC AGGTGGAGTTGCAGTGAAGGCTTCATTTCTGTTTTCTTTTCACATTTCAA AAGTCGAGATCGTCTATACCTTTTACACGGAGTATATTTACTATTTGATG TCTGTTTAGTAACTGGAGGATGGAAGTCCACGTCAACTTTTCGTACCTGA TGAACGGNTTTTTGTTTCCGGTAAAGATACCACTTCCCATACGTGCCACT CTCTCGGCTTCCTTGGCCATCTTGTCAAAAGTGCGTCGACCGTACTCATT CCGCACTTTATCCCTTAATGACGCGGACTTATGTGCCTTCTGTCTGGACC GCTGCACGTGGGCTTCTCTCTGCTCGTGGTGGGACTGACTTTTCATGTCT NAAATGTGCACTACAAAATTCTAAGTCAGAAAAATGTTACCCCATGATAT GATTTTGCATCTGTTTCCTGAATTTTGGGTTTGAATTTTAGGTCCCCTGG GAATATCTAAGCTGACTCCCAAGGGATTCAAAACCTTTTTGGAGGTTTTT AAGCTGAAAACTTGAAATAAGATGACCCACAATGGAATTAAGTATCTTAT TGTTGCATTCTGCAGTTCAAAATGTTGTTCTTTCAATCTACAACTGATTT TTAAGTGATTTTCAAATGTTAAGTTTTCACGCGCTAAAAANTCCTGGTCT CGTTGCTCTCGGACTCTTCTACTGCGCTCCAACTGCTGTTTTTCTTCCAG AGACTTTGCTTTGAGGCTGAGATCTCTACGCAACATCTGCTGTTGGTAAT TTTTCTCCAATGAAGTATACTTCGTCTCTATGTCTCCCCGCAGGCTTTCT AACTCTTGCTGTCGTTGCTGGTCGACTGCAGTTTTCCGCCGCTCGTATAG AGCCACCTCGGTGGCATTTTTCACCCGCACTCGGTGATGTTCGAGATGCC TTCGTTTCATTCTCGTCTCTTCGGCCGTCGCCGTACGCGCCATCTGTTGT TGCTCGACGCTTTCTCGGAATGCCCGCATTTCCGTTTCCTTTTCACGCAA GCGTTNTCTAAGAAAATTATACTACACATTTTCTGACACATTTTAAAGAA ATTTATTTTTTCACGCGCAAATTCTTCACGCGCGAATTTTCACGCGCAAA TTTTTCACGCGCAGAAAACCCGTTCCCTACAGAGGCGGTAACACAGTCTT CCAAACAAAACCCCACCAGTCCACACTAACCTATTTGGAAGGTGGATACG TTTTTGTTCCCGGTAAAGATACCACTTCCCATACGTGCCACTCTCTCGGC TTCCTTGGCCATCTTGTCAAAAGTGCGTCGACCGTACTCATTCCGCACTT TATCCCTTAATGACGCGGACTTATGTGCCTTATGTCTGGACCGCTGCACG TGGGCTTCTCTCTGCTCGTGGTGGGACTGACTTTTCATGTCTTTTCTGAC GATAGTTTGGGTAACCTCCTCCCGATACTGCGAGTCTTCTGTCATGACGC GGTCCAGATTTTCTCTTTGAAGTCGCTCCTTCTCCGCTCGGATCACAGCA GCGCGCGCTGCCTTGTTCTGAGCCGTTTGGGACGAGATTTCATGAGCCCG TTGGAAGGCAGCCTCCTTTTCCGCCACGGTAGCCTCAGCCCATTGCTGCA TCTCCTGGTCTCGTTGCTCTCGGACTCTTCTACTGCGCTCCAACTGCTGT TTTTCTTCCAGAGACTTTGCTTTGAGGCTGAGATCTCTACGCAACATCTG CTGTTGGTAATTTTTCTCCAATGAAGTATACTTCGTCTCTATGTCTCCCC GCAGGCTTTCTAACTCTTGCTGTCGTTGCTGGTCGACTGCAGTTTTCCGC CGCTCGTATAGAGCCACCTCGGTGGCATTTTTCACCCGCACTCGGTGATG TTCGAGATGCCTTCGTTTCATTCTCGTCTCTTCGGCCGTCGCCGTACGCG CCATCTGTTGTTGCTCGACGCTTTCTCGGAATGCCCGCATTTCCGTTTCC TTTTCACGCAAGCGTTGTTGTTGCTCATGTTTCAGCTGCATTTCCCTCAT CTTCTTTTCCTGCAGGTGACGCTGCCGTCTGGCCTCTTGTACCTTATGCC CCTCCGTCCACGACTGCATCTTACTTCCTACAGCCGCCTCCATGTCTTGC CGCAAGGCCTCCTCCTCTCGCCTCATCTCTTCTTTCCTCCTCCGCATCTC CTCTTCCTTCCTCCTATTCTCCAATGCGATTCGCTGTTTCCGTTCATTCT CTGCCATCTCCCGCCTTATCCTTTCCCGCTCTCGTTCCTCTTCCCATGTA AGTTGCGCGATTGTTTTTATCTCTGCGTGCTCTTCCTCTTGGCGTCGCCG TGCTTCCATGAGCTCTACAATGCGGCGGTCTCGCTCGGGCAGGTCTGCGC CAGACAGGGTTCTCCTCATGGCGATGTTCGAATCGCGCCTCCTGGACGCC GAGGAAGGTCTACTGCCAGAAATGCTGAGTTTCTGGAGATCACTGAGTCG AAGGGAGGTACTGCGGGTGAGTCTAGTGGCAGACTGTGATCTTGGCGGGT GCCTGCTTCTTGTCCTCTTTGTCTTGGTCGGCGTCCCATCCTCCGCGTCC GACCTCTCCTGACTGCTCCTGGTGCTCTCTGACGTCATACTCCGTATCTC CCACGCCGTCCGACTTCGTGTAAGACTACCTGGCACGGTTTTTGGCACTT CGGATTTGGCCGACGAGGACACCGGGGTCCTCTTTTTCATTCCGTTCTTT TTCTCTTCTGCTATGACTTGCTTACGTATTTCTCTGCACTTCTCTAATTT GCGCAGCCTGTCTGTCTCGTGCTCTTGAAACATGCCGTGTATGATACGTA CCGGCATCCCCTGCGGTAGATACTCGTCCTCAAGTTCTGCTAGATTCTTT GGCAGAAGCTCGACTGGTTTGATACCCATTCGAGCACACGCCTCGAGGGA CCTCGGGCTTGTAAGCACATACCTGCTGCCCTCGGCCTCCGGGGTGTCAA AATTATACAAATCCAAGCGAATATTGGGATTTTTGTCCTCCTCCCTGCTG TCTTCCTGTTCGAACATGGCGTTATCGATTACTGGTGACGCCCAGGGATG AATAATTGATGAAATCGGCCCTTAATATTGACAAGTCACCTGCCACGGCC TAATTCAATCACGGCGGTGGAAGTAGGCTCGTGCCATTATCTCACACGCT ACACATATCTCATTTGTGTGCTGCCAATTATATAGTTACAACATAACTGA GTCAGTACAATGGCACAGCCTATCATTAATAACTAAGCAATTGTGACTTC TGTCAATCAAAAACAATGATGCAGTAGTCACCACAGCTGCATGCTCCTAA CGTTCTTGTATACAGTAGTCAAAGTCGTCCCAACTCTACCGGTATGCCTG TGAATTCATACCTTAAATCTTGAGAACGAGGAAATCGTGACTATGAATTC TGTGGTGTCAAACGGAGTTGATGTATCGATCAATGCCGGCCCGATGTGAC CGTGGTAACGGTTCGGCGAACACGCACACCCTGCCGCCGCCTGGGCCCTT CAACTTGCACGGGGGATGCTGCGAAATATGCGAGGACGCTGTTGTGGCTT CGGAAATGATGAAGTATTTCAAACATCGAACAGCCTGCCTGGTGAGAAGT GGCACATCCCAGGAAAATGGTCTCTTGGCCCTCCCTCAATACATGGACGA AATTCTATCCCTCCGACGTTTTGAACAAAACGGCTCCGTCCAAATTTGCG CTCTCTACCGGCGAATCCCTTCTTGTCCTGTAGGTGAAATCCTCACAATT CTCGCCTTAAGTCGTATTTGAAACGCCAGACATCTCCCGCCTGGCCGGAG GCGGTCTCCTATTGTCCGGTTATTAGTACATAATCACCCAACCACAACAA CGTTACTGTCCAGGTAATCTCACCTGCCGACCAACGGATTCACCACTCCC GCAGGCCGCATGTACCGGAACGGTTGGCGGGAATCAAAATTGTCGTAAAA TCCCAAACATCGTAAAAAAACACAAATATCTTTCTCAATAAGTTAGAGAT ATTATGATACCAGATACGTATTTATATTCTTAACCAGATATATATATCAT TTGCAATATGATTTGACAAGAATCGGATATACTTAGATTTTCGCTAGTTT GCAACATGACGTAAAACGAAAACCTTCATTGAAGGTCAGAGGTCGCCGTC TCACCAGGTCGTGTTGCTGAAAGAAGACAAGAAACATAATATTTTATATT TGTGAAAACTTGTCATTTTAGGCTGGCTGAATAATCATTAGAATGGCACG TATTCCACCTGGACTGATCATCAACCCAGCCCCTGGTGTACGGTACAAAG TTCCAGCCGTGAAAAAACTCACGAAAGAATTAATTTTGAAGGATAAAGTG AAGTTTCAGAAAAACAGACTTGGAGGTGAGTGTGTCGACTTTGAATTGAA GCAGCTACTTTTTTATGTACAAAGTATAACCTGTTGTGGCGCTTTAAACA TTCCATTCGAAGACATTACTTTCTTTTTAAGCTTTCTTATATCAAGCAAA CATCATGTTAAGTTGGCCTTTTAAGGTAAACGTCATTTTACATAAAATTG AAAAATACTCCTGAAGGACAGCTGCACTTGCAGTGTTCCAACACTACAAT TAAACAATGTAAAAATGAAATGCACCAGGACACTAGTATTTTCATCATCA TATAATTATACAGTTTAAGCACAGGGACGTACAGTCAAACCTGTATTAGC GGTCACCTTTGCATAGCGGCCACCTGCCCATAGTGGTCACTTTTTGTCGG TCCCTTGGATTTTTCCCATTGACATAAGCATTAAGAATTAGGCTATAGCG GCCACCTGTCCAACGCGGTCGCGGCCAGACAATTTTCAGTCCCGCGAGTA CAGTAACACTGCCGATAACAGTCACGGCGCGCCGGTAGAAGCCGCATCGC CACCGCGCGCGGGTTCAAAATCTTCATTTTTTCACGCAGTTATCAAATTT ATGTGGACTCAACTGGATAGGATCATAATAAAGAAAACCAGAATGTTTTA TCTTTGTTAGAAAATCCATGGTTTGACGCGAAGTCAAGAATAATTTTCTT CACATGGCAAGCGTTTGTACATCGAGGTAAAATTGACCATTTCTGTGCAT TTCGACTGGATAAATATTACGGCAGCTTTTTGGAAAATACAACCCACACA TGTACCTGATGCGGTAAGTTCGCGAAATGTTTGAATGTCGGCCCAATTTC CGTTTTCACCGGGAATTCATTCAAATTGTGCTCAAAACGTGTTTCGCGCA ATTTTCAAAATGGCGCTGATACAAACTGGATAGGTAGCAGCATAAAGGTC AACGGAAGACACCACTGTTACGGAGGTATAATATACTAAATTTATTTTGC TGCAAAGTATCACTGAGGATAATTACTAAACCAAAAGCTTCAAAATGAAT GTGGATAATACTACTATGATGTAAAATTTGGGCTGTTGCAATTTTCTGAA AAGACAAAAAGCCCTCAAAAGAGCGACCTTCTTCTGAGTACCCTATTAGC ATAATGGTAGATGCTGATCAACACAAGCCACAACAAGAGACTGAGGAAAA TTGTCGCCACGATTTTATGTTTGAAAACAGTCGAAAACGAACAGTAAGTG ACAACTGAGCAACATGTATTTTGTTCTTAACTAACTAGGAGTAAAAGAGC AACAATCGAACTTCTAAAATGTGCCTTACCTGTTTACATGTGTACTGTAC GGTGAATAAATGTATCTCAGTGGGTACTGAAAACATGTGTCACTCGTAGT CAATTAATCAACATTTTCTCCATAGCGGCCACCTGTCCTTAGCGGCCAGT TTTGGCCAGTCCCTTGAGTGACCGCTATAGACAGGTTTGACTGTATATTG ATAAACTGAACAAAGAAGTGCAATGTACTACCAAGGACATTCTTTCTTCA ACTATTCAAAGAAGTGGCTATAATTTGACAGGATCATCCTGTCAACAGTA GAAAAATTGCACTGTTGACAGGATGATCCTGTCAGCAGTAGAAAAAATTG CACTGTACAGTCGAAAGGATGATTACGGCTGTTACTTGCATGTGACCCAT GATACGGCTAAGTTCAGTGTAGAGGGTTCTGATTGGAGTATGGACGTGTA CTCGATGTACTCGCCTAACATGACATCAGAGACAAACCACCACTATAATC AGCATCCTAGATACGTCCCATGCAGCACCAAGCTGGATGAACACAGTTAA AATTTGACTGGTTTCTAGCATATACACTATACATCCGAAATCATGCTGTG ATGGTACGCTGTGATGATGACTGCCATCTTGAACTAACACCTAATACCTC TTGCCAACAATGCATTGAAAAATGGCTTGATGATACTGTCAACAGTGCAA ATTTTTCCACTGTTGACAGAAAGATATTGTCAGTAGCCTCGGGCAAGAAG TCTGTTTTGAATTTATCACTCGGATAGATCACAAATTTGTGTCCCTTTCC AGGGAATGACTGCAAACAAGGGGCTAGGGCCGGCAGGTTGTTACTAGAGT CGGTCGGGTAACTGGAAACACAACATTTTTTTCTAAGCCTATTACCATGA CCGTACCTGATCATTACATATATCCAAGATCTGCCCTTTATGATCACATA ACTAAAAAAACACTGTGACCTCAGGTAACCTGTTGGTTTCTTCTGTCTTC CTCCACAGCCGCCACGTGTCTCACAGAGATGAGTCTTATGATGGCCTGTT GGAAGGAAAATGACTTTAAAGATTCAGCATGTGCGAAGGAGATCACTGCA TTCCATAAGTGCACCGAGGAGGCAACTGTGAGTAAACAGATGTGCGGAAG CATTGAGTAGGAGAGTGTGTTTAATTACCTTTACATTCACTGAAGGGAAT CATGTTGTTTTTGCTCCGTTTCCTTTTTCTTCCCTTCTTTTTCTTCCATT CCAAACAGATAAGGTCAATGAAATGGACCAGACGGCTGTCGGTGTCACCT TGGTTACTGGTTAAGTAGCAGACACCCTGCGGTAGTCAATTACATTACGT AGCAAGTGGCAGTACAGAGGTGGAGGGGATGGTCACCATATATATAACCT CAAGCCAACCGTACACACTGAGTGACACTCACGCCACATCTTCAGAAAAG ACGCTGTAGCTGCATGTTCCTGTTTAGAACTTTAATCGAACCCACATCGA CTAGTTTCGCCTTGTGTGTAGCTTTCTCAAGGATCAGAGCTTGAATTACG TATTGCTTATTACCATTCTAGTTTGTGTTGTGTTACATTTTTGGCTGTGT ACCTGTACTGTAACATATTGTTTATGTATGGGTTCGGACCTGTTGATACA CCTGAACAAACTAAAACACTGGTGGCTACAATTCATTAGATAAAAGATAG GAAAGTCATGTTCCAAGGTGACATTCATCACATTTATTCATTGAAAGTTA GGAGAACTTTAGATAGGACTTGCTGGGACGTAGGGGTGAGGGATCTAGAG CACTCAATGGCAAACCTTGTCGTCTAGCTTCAACTTTTGTTACTGGATTT TGCCTAACCAAGAAGTTCACAGTATCCCATGCATGTGGTTGATTTGATAT ATATCTGTGAGTACGTTATCAGATGCATTGTATCATGCATCACTGGAAAC TTTATTTATTACATATACGCTTTACAATTCATGGGTTGAGCATAAGGGCT TCTTATGTAAGCAGGTCGCATAAAAAAGTGATGAAATTTCCCTTGACCAT ATGTCTGTTGTTCTTCAATTAATGATTAGCATAATGTGCTTCGTCGTTGT TAATTTTATATGTTTTCCTTTAAAATGATATCTTATTTGTTATGATAACA CTTTTTGTACAACAAGCACCAAAACTGAGCTTCGCCAAAAAAAGTGCAAA GATCCCCTTACCAAGGTCAGACACTCTTGGCAGGGGAGTTCTGCCTGCAT GTTTTGTGACTCACTTACACAGTCATGAGCAGCTCTTGTGTTCCACTTGT GAATGTAGGATCATGACAAATTTGGTATCCTTGTTCAGGGTAATACACCA GCTTTCAAATTCTAATGGTACATACTTTTATACACTTTTACATGTAGTTG ATAAAGTAACAACAGAAAACCGATTCGATCAAATTTAAGTTTCTGAACGT TTTGCACCAAGTTCAGAATGTGATAAACCAGACCTAACTACTGAAAACTG ACTCTTGCCTTGTATCCTCCATGCAGAAAGAACGACGGGGAGTGAAGGAG GCAGATTTGAAGGGGGTGGTACAGGAAGGACGGCTCACCAGCAGAAACAT CAACAAGTTATTACAAAGATTTCCTCATCCAGTAAAACCTCACTAGCAAA GATTACTTAGGAACTGTGTCTGGATTGTTTTAGATTTTGTTATTGCAGAA ATATCATTCACACAGCAGAGTGAAAAATGTGTGAAATCCATTGACATGTA AAGACTAAAGAGTGTTTTGTTTTTCTGCCGTTTCGGAGCTTCCTATGTTT TTGCAGATCACATGATGAATATGTTACATACAATGCTGAGGCCTAGGAAG AAATGTTGTGTTTCCAATTACGCTTCTGAAAAAAAAATCAATAGGTAGAG ATTCTCTGGGTTTTTTTAGATGTCCACTGTGAAGAGAACCAACAAATACA TTGTTTTCAATGATGAAAAACTGAATTGCATCAAGACACTGGTATTTTCA ACAATGTATTTTAATTGTCTGTACAGTCGTGCTATTATGCAGGGTGTTAA CATAGAGGGGGACCTAGGTTTGGTGGGTCTGTTAAGCCGGC

Coding sequence (CDS) from alignment at Sc0000093:25658..39998-

>transcript:BL89488_cuf1 ID=transcript:BL89488_cuf1|Name=transcript:BL89488_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1116bp|location=Sequence derived from alignment at Sc0000093:25658..39998- (Branchiostoma lanceolatum)
ATGGCACGTATTCCACCTGGACTGATCATCAACCCAGCCCCTGGTGTACG
GTACAAAGTTCCAGCCGTGAAAAAACTCACGAAAGAATTAATTTTGAAGG
ATAAAGTGAAGTTTCAGAAAAACAGACTTGGAGCCGCCACGTGTCTCACA
GAGATGAGTCTTATGATGGCCTGTTGGAAGGAAAATGACTTTAAAGATTC
AGCATGTGCGAAGGAGATCACTGCATTCCATAAGTGCACCGAGGAGGCAA
CTAAAGAACGACGGGGAGTGAAGGAGGCAGATTTGAAGGGGGTGGTACAG
GAAGGACGGCTCACCAGCAGAAACATCAACAAGTTATTACAAAGATTTCC
TCATCCAGTAAAACCTCACTAGATGGCACGTATTCCACCTGGACTGATCA
TCAACCCAGCCCCTGGTGTACGGTACAAAGTTCCAGCCGTGAAAAAACTC
ACGAAAGAATTAATTTTGAAGGATAAAGTGAAGTTTCAGAAAAACAGACT
TGGAGCCGCCACGTGTCTCACAGAGATGAGTCTTATGATGGCCTGTTGGA
AGGAAAATGACTTTAAAGATTCAGCATGTGCGAAGGAGATCACTGCATTC
CATAAGTGCACCGAGGAGGCAACTAAAGAACGACGGGGAGTGAAGGAGGC
AGATTTGAAGGGGGTGGTACAGGAAGGACGGCTCACCAGCAGAAACATCA
ACAAGTTATTACAAAGATTTCCTCATCCAGTAAAACCTCACTAGATGGCA
CGTATTCCACCTGGACTGATCATCAACCCAGCCCCTGGTGTACGGTACAA
AGTTCCAGCCGTGAAAAAACTCACGAAAGAATTAATTTTGAAGGATAAAG
TGAAGTTTCAGAAAAACAGACTTGGAGCCGCCACGTGTCTCACAGAGATG
AGTCTTATGATGGCCTGTTGGAAGGAAAATGACTTTAAAGATTCAGCATG
TGCGAAGGAGATCACTGCATTCCATAAGTGCACCGAGGAGGCAACTAAAG
AACGACGGGGAGTGAAGGAGGCAGATTTGAAGGGGGTGGTACAGGAAGGA
CGGCTCACCAGCAGAAACATCAACAAGTTATTACAAAGATTTCCTCATCC
AGTAAAACCTCACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL89488gene:BL89488Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL89488_cuf1transcript:BL89488_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL89488_cuf1-E1BL89488_cuf1-E1-1564476830-292760Branchiostoma lanceolatumexon
BL89488_cuf1-E2BL89488_cuf1-E2-1564476830-292758Branchiostoma lanceolatumexon
BL89488_cuf1-E3BL89488_cuf1-E3-1564476830-292755Branchiostoma lanceolatumexon
BL89488_cuf1-E4BL89488_cuf1-E4-1564476830-292753Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000093genomeSc0000093:25658..39998 -
Properties
Property NameValue
Transcript idBL89488_cuf1
Biotypeprotein_coding