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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96554_cuf2 >transcript:BL96554_cuf2-protein ID=transcript:BL96554_cuf2-protein|Name=transcript:BL96554_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=165bp
ITCEPLYVSQPKLSISCTNGFNFGSTCQFDCEPGYPLVGMTNTSCELTGA
NGSRGQWIPDPMEESPTCKVMKCPPLRLPKNGAISCSGWALGETCQLQCE
DLYDIPYNMPSNGLWVCSTTNGVWAPDDRVLDCTRRRNPRRLRLPGEVYY
YSGSCGDPDTLREIR Run BLAST on NCBI mRNA from alignment at Sc0000009:1019458..1021630- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96554_cuf2 ID=transcript:BL96554_cuf2|Name=transcript:BL96554_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2173bp|location=Sequence derived from alignment at Sc0000009:1019458..1021630- (Branchiostoma lanceolatum)
ATAACTTGTGAGCCTCTCTACGTCAGTCAGCCCAAGCTGTCAATCAGCTG
CACGAATGGGTTCAACTTTGGTTCCACGTGTCAGTTCGACTGTGAGCCGG
GCTACCCATTGGTCGGGATGACAAATACGTCATGTGAACTGACAGGTGCC
AACGGATCACGTGGACAGTGGATTCCTGATCCAATGGAGGAAAGCCCAAC
ATGTAAAGGTAAGGATACTATCATTAGGTTAACTAAATGCTGATATTTCT
TTACACGATTCGCATACACATTGAATAAAGATGGGCATTTGTGACCATCA
CATTTGATTATGTACATCAAGCCATTGCTTGCATAAAAATATGGTAACAA
CTGTTGTCGGAGTAACATCTAGTAGAAAAAAATTCTTAATGTAAAAAAGG
AGACTACGATTCAATGAGTCATATTCTTTTTTAACAATATGACATAAAAA
CAAAGGTCATACAATTTGAACGGTCTTTCTCTGACTATTTTGTAGACTCT
AACATACTTCGTGGGTATCGGCAATTTTTACCATTCCATATGGGCAGCCA
CACATGGAGTCTAACTATTATGCATGGCTTCAAGTGTAGCCTGCCCCTGC
GGGGCGAACCCCCAAACTATACAGCACCTCCAACAGAACTGCAAACTTGG
CACAACATGCACTGACGATGATCTACGAGAGGCCAGCCAGACTGCCCGTC
AGTGGATACAGAAGTCGAGCGACAAGATATGATGATGAATTATTATGCAA
CATGTCTCAGTAGTTGGCTTTTGCTTTCATGTTTTTTACAGTGATGAAAT
GTCCGCCACTACGCCTCCCGAAGAACGGCGCGATCTCGTGCAGCGGTTGG
GCCCTGGGTGAGACGTGCCAGCTTCAGTGTGAAGACCTGTACGATATCCC
CTACAACATGCCGAGTAACGGTCTGTGGGTCTGTTCAACCACTAACGGCG
TCTGGGCGCCGGACGACCGGGTCTTAGACTGCACACGTGAGTGAAACCTA
CCCGTCGTGTATGTTTTCTCTAGAAAATCATCTCATGTATAGTACTGATA
AAAAAATGTTGTCTTTTATTTCACTGATATGGTTGTCTGAAAGATCATGT
TAGTACTTCTGTGGCGTCGTGTGGCGTAATGGATAGAACATTCGACTGTC
AAACAAGGCAACCCAAGTTCGAACCCGGACTGCCCCCAGGCATGTCTGGA
CATGCGCCCCGACGCTGTGCCCTTGGGAAAGGCACTTAACATGACTTTCC
ACACTTCACTCAGGTGTACATGTAAATGAGTACCTAGCTCAACAAGGGTT
AGGGACGTCCCTCGGATAGGACGTTAAATGGAGGTCCCGTGTTTGGGGAG
AGCCACACCCGGCGCACGTAAAAGAACCCACCACACCTTTCGAAAAAGAG
TAGGGGCATGCCGGCGTGAGTGGCTCAAAACATAAAGTCCTATAACTGCA
AATGGGTTCGCCCTTAGTCGAATAGCCTCTGGCTAGTTGGGCAACCCTGG
CATGTACATGCTGAACCAATGAATAAAATGAATAAAATAGTAAATAAAAT
AAATAAAATGTCGCTTTTCCCCCCTTTTTCCCTTCATATTCCTGTTATAA
GCAGATTTTCTTTGGCATTTGTATTTATATTTTCTACTCTATCAGATTCA
TTCCACTATTTAAGTCAAATCTATGCTCAAATAGGAATTAAACTGCATGT
AGTCAAAAGAAAGAATGATTTATTGTGTAGTTTTACTTCAAAATTTAACC
CATATTTAGCGTGCGTAGTCCAGTGGTTAGCGATCTGAAACTAGAAGCCC
CGGGTTCGATGCCGGCTGTGTCCCTCACCCAACAGGCACGCTACCGGAAA
GGGTCGCAGTCCTTAGGATGGGACGTTAAGCCGTGGTCCACTGTTCATTG
TGCTTGTCGAAAAAAGCTAGGGGAATTTCCCGGGTACAATGAACCTGTAA
ACACTGTAAATAGCGTCTGTCTTCCTGTCACGACCAGTGGAAGATTAGCT
CATCTGTTCATTGAGTTCATTTGAGCTAATTGGTTACGAGATCACTTTCC
TTTCCATATTGTGCCCTTTTATTTACCGCAGGCCGGAGAAACCCTCGGCG
GCTGAGACTCCCAGGAGAGGTGTACTACTACAGCGGTAGCTGCGGAGACC
CGGACACACTCCGGGAGATCCGG Coding sequence (CDS) from alignment at Sc0000009:1019458..1021630- >transcript:BL96554_cuf2 ID=transcript:BL96554_cuf2|Name=transcript:BL96554_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1485bp|location=Sequence derived from alignment at Sc0000009:1019458..1021630- (Branchiostoma lanceolatum)
ATAACTTGTGAGCCTCTCTACGTCAGTCAGCCCAAGCTGTCAATCAGCTG
CACGAATGGGTTCAACTTTGGTTCCACGTGTCAGTTCGACTGTGAGCCGG
GCTACCCATTGGTCGGGATGACAAATACGTCATGTGAACTGACAGGTGCC
AACGGATCACGTGGACAGTGGATTCCTGATCCAATGGAGGAAAGCCCAAC
ATGTAAAGTGATGAAATGTCCGCCACTACGCCTCCCGAAGAACGGCGCGA
TCTCGTGCAGCGGTTGGGCCCTGGGTGAGACGTGCCAGCTTCAGTGTGAA
GACCTGTACGATATCCCCTACAACATGCCGAGTAACGGTCTGTGGGTCTG
TTCAACCACTAACGGCGTCTGGGCGCCGGACGACCGGGTCTTAGACTGCA
CACGCCGGAGAAACCCTCGGCGGCTGAGACTCCCAGGAGAGGTGTACTAC
TACAGCGGTAGCTGCGGAGACCCGGACACACTCCGGGAGATCCGGATAAC
TTGTGAGCCTCTCTACGTCAGTCAGCCCAAGCTGTCAATCAGCTGCACGA
ATGGGTTCAACTTTGGTTCCACGTGTCAGTTCGACTGTGAGCCGGGCTAC
CCATTGGTCGGGATGACAAATACGTCATGTGAACTGACAGGTGCCAACGG
ATCACGTGGACAGTGGATTCCTGATCCAATGGAGGAAAGCCCAACATGTA
AAGTGATGAAATGTCCGCCACTACGCCTCCCGAAGAACGGCGCGATCTCG
TGCAGCGGTTGGGCCCTGGGTGAGACGTGCCAGCTTCAGTGTGAAGACCT
GTACGATATCCCCTACAACATGCCGAGTAACGGTCTGTGGGTCTGTTCAA
CCACTAACGGCGTCTGGGCGCCGGACGACCGGGTCTTAGACTGCACACGC
CGGAGAAACCCTCGGCGGCTGAGACTCCCAGGAGAGGTGTACTACTACAG
CGGTAGCTGCGGAGACCCGGACACACTCCGGGAGATCCGGATAACTTGTG
AGCCTCTCTACGTCAGTCAGCCCAAGCTGTCAATCAGCTGCACGAATGGG
TTCAACTTTGGTTCCACGTGTCAGTTCGACTGTGAGCCGGGCTACCCATT
GGTCGGGATGACAAATACGTCATGTGAACTGACAGGTGCCAACGGATCAC
GTGGACAGTGGATTCCTGATCCAATGGAGGAAAGCCCAACATGTAAAGTG
ATGAAATGTCCGCCACTACGCCTCCCGAAGAACGGCGCGATCTCGTGCAG
CGGTTGGGCCCTGGGTGAGACGTGCCAGCTTCAGTGTGAAGACCTGTACG
ATATCCCCTACAACATGCCGAGTAACGGTCTGTGGGTCTGTTCAACCACT
AACGGCGTCTGGGCGCCGGACGACCGGGTCTTAGACTGCACACGCCGGAG
AAACCCTCGGCGGCTGAGACTCCCAGGAGAGGTGTACTACTACAGCGGTA
GCTGCGGAGACCCGGACACACTCCGGGAGATCCGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000009 | genome | Sc0000009:1019458..1021630 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96554_cuf2 |
| Biotype | protein_coding |
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