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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95207_evm1 >transcript:BL95207_evm1-protein ID=transcript:BL95207_evm1-protein|Name=transcript:BL95207_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=248bp
MAPFLLLFVALATASPVKRQAVPLDADGDGLVSFDEVFNTMTLHEALVAL
DRDGDGFLYLPQIIELWGTGDKFYELNTDGDNHLTFTEIENGMTLQDFYN
EFDFNGDGTLDVAEAYQLTFIYETINNVVDDPLDSDGDGRLSKLEVLSHM
TYDEVLTALDADGDGSMTPAELMVLFGNKTADWVAAQDDNGDGAVSIGEA
HHHHMRLDGVFDFVDLDGSTYLEAGEDAGFYAVWDIILNMPSTDPIIG Run BLAST on NCBI mRNA from alignment at Sc0000011:1711114..1714281+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95207_evm1 ID=transcript:BL95207_evm1|Name=transcript:BL95207_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3168bp|location=Sequence derived from alignment at Sc0000011:1711114..1714281+ (Branchiostoma lanceolatum)
ATGGCTCCCTTCCTTCTGTTGTTCGTTGCCCTGGCAACTGCGTCTCCAGT
GAAGAGGTACGCGCTGAACATTTACCTTAATTCCTTACTTTAATATACTA
TAATCTGCCGTATTCTATGTACCTACATTTCTTTTTTTGGTACATCCTTC
GGCAACATCAACCTGAGTTGGCCAACAGACATAGGCGCCCTCTGACGTAA
CATTGTTTTACAGACACGGGGCACCGGCTGCTTATAATTCAGGAGTAACT
ACTGCTGTGCCACAGTAGACAATCAGAAAATGTCACCGCATAAACTTTTC
ACATAGCCTCCACCAGGCTCCGCGGATCGCTGGAAAAATAGTAAAAATCG
ACCAAAAAGAGTGAATAGTATGCCAAGGGTAGTCCGCTATGCATGGAGGG
CCTATTGACCTTTCCTGCATACACACACCATTCTGTATTGCGGCGAATAG
CGTGTCGATGCAGTGAGAAAACATCCACAAACGTTAAAATTACAGAGAAG
TCACAGTTTTTCTCGACCGTTTCCCATGAAGGCAGGCTGTTCCGCTGGAC
GCGGATGGAGACGGGCTGGTCTCCTTTGATGAGGTGTTCAACACCATGAC
TCTGCACGAGGCTCTGGTCGCCCTGGACAGGGATGGTAAGCAAATTACAG
ATTAACTCTATAATTTCTCCATTAGTTTCTGCCCACATCTAGGTTTTGTA
ACAAACTATTGGTCATTAATTTTTGAGACTAAAAAATCAAGAGTCCGACT
AACTTTGTGAAAAACATGGTAAAATTGCTGCCTCTATGATCAGTTTAGAT
ATAAATCTTAGTTAGACGCATTTTTTCTATCTTAAAGATAGCTTTGCGTC
AACAGTCATGGAAGCAGTCGCGAATGTATCGTCTTAAGTGCAACACTCAT
ATGATGAAAAATATTGTCTGAGCCATTGGGACATTGCAAATCATATGGAA
ACCAGTGTCCTTTAACTGTTATAGTTTTGGGCTGGTCCATACTGTCTTCC
CAAGGCAATGCCAGATTTTGCCCTCATTTTAGCTATAATGTCTTCAATAG
CATTCAACTTAGTTTTCTTTGGTTCGCAACCTCTACTTAGTCTTCTACAG
ACCCTTTATGATTAACGACCTATCAGCCTGCCAAGTTCACCTTCCGCCGA
TGTAAACTGTACATTATGGACTGATGGAGATAAAACGTCTGTAGAAGACT
AGACAAAGTGTGTACAGAAGAAAACTATGTTCAATTTGTTGTATCTACTC
GTGGCCTACATGCAATGAACACATTATCCTTAACGTCCAGGTGACGGGTT
CCTGTACCTGCCCCAGATCATCGAGCTGTGGGGAACCGGAGACAAGTTCT
ACGAACTCAACACGGACGGCGACAATCACCTCACCTTCACGGAAATCGAA
AACGGGATGACTCTGCAAGACTTCTACAACGAATTCGACTTCAACGGTAA
GTTTAAGTCTCAGTTCTTCCAGGTACCCTATAATAACCACCTTACCAAAA
TTAAGGTTCCCCCGAGGTGTCGCTGCAGTGCCTCAGAAAGTCGCTAGGAT
GCCCAAAAGTTAAGCATTTCGGGTTCTACCGAAGACCTACCAACGTACCA
AATATCAATACAATCCACCAAGGCATTTTCAAGTTATTCTTCCGCGTACA
GACAGACATACATACACATATACGGACAATAATGCACACATACATACATA
CAAACGCTAGCGAAAACATAACCTTCTTGGAGAAGGTAATATAAAACATA
GATTCGTAGTCATTTAATACAAACTGGCGTCGGTGTGGCGCAACGGTCGA
GCGTTGGACTCAGAACCAATAGGCCCCGGGTTCGACATTTGCCATACCCA
ACGTTGTGCTCTTGACTCCAACCGAGCCTCTTCGTCTAATCTGTCAAAAG
AATGCCAACACAAACTACGGGTTTGGCTGCCAATGTGCCAACATCTTGCA
CATTTGTCACTAAAAACCGTTAATTTTTTCTGATACAAACTGGTTCATGT
GTGCAGGAGACGGAACCCTGGACGTGGCGGAGGCTTACCAGCTCACGTTC
ATTTACGAAACGATCAACAACGTGGTGGACGACCCCCTGGATTCGGACGG
AGACGGGAGGCTCTCCAAACTCGAGGTGCTGAGCCACATGACCTACGACG
AGGTTCTCACTGCCTTGGACGCTGACGGTAAGCAAAGACAACACACAGTT
ATTCCCCATGTAGACCAAACCGATAGAGAGAGAGAGAGAGAGAGTGAGAG
TATGTGTGTCTTTGGTCTTGATCTGGACATCCAATGTAAGCAAAAACAAA
TCAAATAAACAAACAGGCAGATTAGATTTGTTTGGTGTTTCCAGGGTAAC
TAAGCAATGTCCAATGAAAGGGAGAGGGAGAGACAGATTGTGTTTGGTCT
TGGTCTGGCCATTGCGATGTAAGCAAACAAAGAGGGAAACATGTCGTGTA
ACTTCTGACGAATTGTGCTGCGTGCAGGCGATGGTTCCATGACCCCTGCT
GAGCTGATGGTCCTGTTCGGTAACAAGACCGCGGACTGGGTCGCCGCTCA
GGACGACAACGGTGATGGAGCGGTGAGCATTGGTGAGGCCCACCACCACC
ACATGAGACTGGACGGGGTCTTCGACTTTGTCGATCTCGACGGTACGTTT
TTTTGTGTTTGAATAGTTTAATCAGGACGGCGAATGAATAAATTACAAAT
TTCTTCATTCACGATCATCTGTACCGTCTGTCATCATCTTCAGGGCACAA
ATTACTGGTTCACTTTGTGCTACAGCTAGGTGTCATTGCTAACAATGCAG
TCCCAAACTTAAAGTATTGTGACATGCATAGATATCAATTGTTAACCTTA
GCATTGGCACATATCTGCGGAATACACTAGGTTCATACATGTTAGGGCAG
GTAAAATTTGAGCCGTACATGTATTTCTTATGTATACCTGCCTGCACCTA
AATCGTACGAATGTTAACGTTTGCCAGTTAAAGAGAAACGAAGAGCATAA
GAAAGAAAAAGAAATATGATGAGATGGTTCTGTAATCTTTCTCACCTTAC
GTTTTATATTCAACTGTTCACAGGTAGTACCTACCTAGAAGCTGGTGAAG
ACGCCGGATTCTACGCAGTGTGGGACATCATTCTGAACATGCCTAGCACA
GACCCCATCATAGGCTGA Coding sequence (CDS) from alignment at Sc0000011:1711114..1714281+ >transcript:BL95207_evm1 ID=transcript:BL95207_evm1|Name=transcript:BL95207_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4482bp|location=Sequence derived from alignment at Sc0000011:1711114..1714281+ (Branchiostoma lanceolatum)
ATGGCTCCCTTCCTTCTGTTGTTCGTTGCCCTGGCAACTGCGTCTCCAGT
GAAGAGGCAGGCTGTTCCGCTGGACGCGGATGGAGACGGGCTGGTCTCCT
TTGATGAGGTGTTCAACACCATGACTCTGCACGAGGCTCTGGTCGCCCTG
GACAGGGATGGTGACGGGTTCCTGTACCTGCCCCAGATCATCGAGCTGTG
GGGAACCGGAGACAAGTTCTACGAACTCAACACGGACGGCGACAATCACC
TCACCTTCACGGAAATCGAAAACGGGATGACTCTGCAAGACTTCTACAAC
GAATTCGACTTCAACGGAGACGGAACCCTGGACGTGGCGGAGGCTTACCA
GCTCACGTTCATTTACGAAACGATCAACAACGTGGTGGACGACCCCCTGG
ATTCGGACGGAGACGGGAGGCTCTCCAAACTCGAGGTGCTGAGCCACATG
ACCTACGACGAGGTTCTCACTGCCTTGGACGCTGACGGCGATGGTTCCAT
GACCCCTGCTGAGCTGATGGTCCTGTTCGGTAACAAGACCGCGGACTGGG
TCGCCGCTCAGGACGACAACGGTGATGGAGCGGTGAGCATTGGTGAGGCC
CACCACCACCACATGAGACTGGACGGGGTCTTCGACTTTGTCGATCTCGA
CGGTAGTACCTACCTAGAAGCTGGTGAAGACGCCGGATTCTACGCAGTGT
GGGACATCATTCTGAACATGCCTAGCACAGACCCCATCATAGGCTGAATG
GCTCCCTTCCTTCTGTTGTTCGTTGCCCTGGCAACTGCGTCTCCAGTGAA
GAGGCAGGCTGTTCCGCTGGACGCGGATGGAGACGGGCTGGTCTCCTTTG
ATGAGGTGTTCAACACCATGACTCTGCACGAGGCTCTGGTCGCCCTGGAC
AGGGATGGTGACGGGTTCCTGTACCTGCCCCAGATCATCGAGCTGTGGGG
AACCGGAGACAAGTTCTACGAACTCAACACGGACGGCGACAATCACCTCA
CCTTCACGGAAATCGAAAACGGGATGACTCTGCAAGACTTCTACAACGAA
TTCGACTTCAACGGAGACGGAACCCTGGACGTGGCGGAGGCTTACCAGCT
CACGTTCATTTACGAAACGATCAACAACGTGGTGGACGACCCCCTGGATT
CGGACGGAGACGGGAGGCTCTCCAAACTCGAGGTGCTGAGCCACATGACC
TACGACGAGGTTCTCACTGCCTTGGACGCTGACGGCGATGGTTCCATGAC
CCCTGCTGAGCTGATGGTCCTGTTCGGTAACAAGACCGCGGACTGGGTCG
CCGCTCAGGACGACAACGGTGATGGAGCGGTGAGCATTGGTGAGGCCCAC
CACCACCACATGAGACTGGACGGGGTCTTCGACTTTGTCGATCTCGACGG
TAGTACCTACCTAGAAGCTGGTGAAGACGCCGGATTCTACGCAGTGTGGG
ACATCATTCTGAACATGCCTAGCACAGACCCCATCATAGGCTGAATGGCT
CCCTTCCTTCTGTTGTTCGTTGCCCTGGCAACTGCGTCTCCAGTGAAGAG
GCAGGCTGTTCCGCTGGACGCGGATGGAGACGGGCTGGTCTCCTTTGATG
AGGTGTTCAACACCATGACTCTGCACGAGGCTCTGGTCGCCCTGGACAGG
GATGGTGACGGGTTCCTGTACCTGCCCCAGATCATCGAGCTGTGGGGAAC
CGGAGACAAGTTCTACGAACTCAACACGGACGGCGACAATCACCTCACCT
TCACGGAAATCGAAAACGGGATGACTCTGCAAGACTTCTACAACGAATTC
GACTTCAACGGAGACGGAACCCTGGACGTGGCGGAGGCTTACCAGCTCAC
GTTCATTTACGAAACGATCAACAACGTGGTGGACGACCCCCTGGATTCGG
ACGGAGACGGGAGGCTCTCCAAACTCGAGGTGCTGAGCCACATGACCTAC
GACGAGGTTCTCACTGCCTTGGACGCTGACGGCGATGGTTCCATGACCCC
TGCTGAGCTGATGGTCCTGTTCGGTAACAAGACCGCGGACTGGGTCGCCG
CTCAGGACGACAACGGTGATGGAGCGGTGAGCATTGGTGAGGCCCACCAC
CACCACATGAGACTGGACGGGGTCTTCGACTTTGTCGATCTCGACGGTAG
TACCTACCTAGAAGCTGGTGAAGACGCCGGATTCTACGCAGTGTGGGACA
TCATTCTGAACATGCCTAGCACAGACCCCATCATAGGCTGAATGGCTCCC
TTCCTTCTGTTGTTCGTTGCCCTGGCAACTGCGTCTCCAGTGAAGAGGCA
GGCTGTTCCGCTGGACGCGGATGGAGACGGGCTGGTCTCCTTTGATGAGG
TGTTCAACACCATGACTCTGCACGAGGCTCTGGTCGCCCTGGACAGGGAT
GGTGACGGGTTCCTGTACCTGCCCCAGATCATCGAGCTGTGGGGAACCGG
AGACAAGTTCTACGAACTCAACACGGACGGCGACAATCACCTCACCTTCA
CGGAAATCGAAAACGGGATGACTCTGCAAGACTTCTACAACGAATTCGAC
TTCAACGGAGACGGAACCCTGGACGTGGCGGAGGCTTACCAGCTCACGTT
CATTTACGAAACGATCAACAACGTGGTGGACGACCCCCTGGATTCGGACG
GAGACGGGAGGCTCTCCAAACTCGAGGTGCTGAGCCACATGACCTACGAC
GAGGTTCTCACTGCCTTGGACGCTGACGGCGATGGTTCCATGACCCCTGC
TGAGCTGATGGTCCTGTTCGGTAACAAGACCGCGGACTGGGTCGCCGCTC
AGGACGACAACGGTGATGGAGCGGTGAGCATTGGTGAGGCCCACCACCAC
CACATGAGACTGGACGGGGTCTTCGACTTTGTCGATCTCGACGGTAGTAC
CTACCTAGAAGCTGGTGAAGACGCCGGATTCTACGCAGTGTGGGACATCA
TTCTGAACATGCCTAGCACAGACCCCATCATAGGCTGAATGGCTCCCTTC
CTTCTGTTGTTCGTTGCCCTGGCAACTGCGTCTCCAGTGAAGAGGCAGGC
TGTTCCGCTGGACGCGGATGGAGACGGGCTGGTCTCCTTTGATGAGGTGT
TCAACACCATGACTCTGCACGAGGCTCTGGTCGCCCTGGACAGGGATGGT
GACGGGTTCCTGTACCTGCCCCAGATCATCGAGCTGTGGGGAACCGGAGA
CAAGTTCTACGAACTCAACACGGACGGCGACAATCACCTCACCTTCACGG
AAATCGAAAACGGGATGACTCTGCAAGACTTCTACAACGAATTCGACTTC
AACGGAGACGGAACCCTGGACGTGGCGGAGGCTTACCAGCTCACGTTCAT
TTACGAAACGATCAACAACGTGGTGGACGACCCCCTGGATTCGGACGGAG
ACGGGAGGCTCTCCAAACTCGAGGTGCTGAGCCACATGACCTACGACGAG
GTTCTCACTGCCTTGGACGCTGACGGCGATGGTTCCATGACCCCTGCTGA
GCTGATGGTCCTGTTCGGTAACAAGACCGCGGACTGGGTCGCCGCTCAGG
ACGACAACGGTGATGGAGCGGTGAGCATTGGTGAGGCCCACCACCACCAC
ATGAGACTGGACGGGGTCTTCGACTTTGTCGATCTCGACGGTAGTACCTA
CCTAGAAGCTGGTGAAGACGCCGGATTCTACGCAGTGTGGGACATCATTC
TGAACATGCCTAGCACAGACCCCATCATAGGCTGAATGGCTCCCTTCCTT
CTGTTGTTCGTTGCCCTGGCAACTGCGTCTCCAGTGAAGAGGCAGGCTGT
TCCGCTGGACGCGGATGGAGACGGGCTGGTCTCCTTTGATGAGGTGTTCA
ACACCATGACTCTGCACGAGGCTCTGGTCGCCCTGGACAGGGATGGTGAC
GGGTTCCTGTACCTGCCCCAGATCATCGAGCTGTGGGGAACCGGAGACAA
GTTCTACGAACTCAACACGGACGGCGACAATCACCTCACCTTCACGGAAA
TCGAAAACGGGATGACTCTGCAAGACTTCTACAACGAATTCGACTTCAAC
GGAGACGGAACCCTGGACGTGGCGGAGGCTTACCAGCTCACGTTCATTTA
CGAAACGATCAACAACGTGGTGGACGACCCCCTGGATTCGGACGGAGACG
GGAGGCTCTCCAAACTCGAGGTGCTGAGCCACATGACCTACGACGAGGTT
CTCACTGCCTTGGACGCTGACGGCGATGGTTCCATGACCCCTGCTGAGCT
GATGGTCCTGTTCGGTAACAAGACCGCGGACTGGGTCGCCGCTCAGGACG
ACAACGGTGATGGAGCGGTGAGCATTGGTGAGGCCCACCACCACCACATG
AGACTGGACGGGGTCTTCGACTTTGTCGATCTCGACGGTAGTACCTACCT
AGAAGCTGGTGAAGACGCCGGATTCTACGCAGTGTGGGACATCATTCTGA
ACATGCCTAGCACAGACCCCATCATAGGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000011 | genome | Sc0000011:1711114..1714281 + |
Properties
| Property Name | Value |
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| Transcript id | BL95207_evm1 |
| Biotype | protein_coding |
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