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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95200_evm0 >transcript:BL95200_evm0-protein ID=transcript:BL95200_evm0-protein|Name=transcript:BL95200_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=239bp
MKVPVVVLVLALLQVVAGETAPNSPDPRTEQCVCSPAIYVDYGDKRDEEA
DSKVLYQLRTQLTLLQGSVESLRTQQEILIAEVSNLTAELLKKTKPEKPV
CPDGYLQFEDRCFNFSIEKKTYTDARSACQAAGGRLGMPKDQLTNDFLTN
QTETRYFAFSRYIVWFGLTDEVREGTWVWEDGTPLIGWSDWAQGEPDDFF
NQDCVGFGSRFGLKWEDGGCSLDTYYVCETKATFPPVDY Run BLAST on NCBI mRNA from alignment at Sc0000010:3294754..3298340- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95200_evm0 ID=transcript:BL95200_evm0|Name=transcript:BL95200_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=3587bp|location=Sequence derived from alignment at Sc0000010:3294754..3298340- (Branchiostoma lanceolatum)
ATGAAAGTGCCTGTGGTTGTTTTGGTTCTTGCTCTGCTGCAAGTGGTTGC
AGGGGAGACGGCTCCCAACTCTCCGGACCCGAGGACAGAGCAGTGCGTGT
GCAGCCCTGCCATCTACGTCGACTATGGAGACAAAAGGGACGAGGAGGCG
GACAGTAAAGTGGTCAGTCTGCTTAGGCTTGCCTGGTCAACTACCATATA
TAGTAACTGGTCATCATTCTTGAAATGGACTTATGTTGTAGTGATTGGTC
ATGTGTCAGCTTTCATATCGATACATTTTGAAGAATAGTACTTGTGCGTT
TTGTAGTTTCTTGTGAGTCTACCACAGAAAGAGCTTTTTTGCCCCTCCCT
CCCCCTCCACATGTTCCCAGAAGCAGCAAATCAGATTACTACTACCTTTG
CAAATATACTACTACTCTCCAAGCAGACGAGTGGGTCCGGCAGGTTTTTG
ACGTGTTTACCCAGGTTGACCAGACAAAAAAAAACATGACAAAGTGGAAA
GCCCGACAAAAACGCCTAAAAACACGTCAAAAACCTGCCGGACCCACTCC
TCTGCTTGGAGAGTGATATACTACAACCTACTCCATGACCTATGATTTTA
CCCTTCAGCTGTACCAGCTTCGGACCCAGTTAACTTTGCTGCAGGGGTCA
GTGGAGTCACTTCGGACCCAACAGGTAGGGCCATGTTCAAAGTTTGGCAG
GCGAAAATTTATGGTGAGTTCAACTCTTGGTGTTGGATTAAAGTTTAAAA
TTTTCCAATATGTACTCTACCAACACAGATGAGCCTTCATGCGGACTGTC
AATCTTCAAATGTTCGCGGTGGTTTTATTTTCGCGGTGACTTCTATAACC
GCAAAATCGTAACACCGCGAATAAGCGTTTTGTATTTGTATGGCTGTTTT
CGTCCTGTTTTCCTTTGTGAAAAATGGTCTTAAGTCTTCTGACCAACTGA
TTTGGAGGTATGTATGAGTGCAGCCTGTGACCCTCTTCATCTTCCGGCCA
CGGAGGAAGTGATGTTTTTGTTTATGTGTGTGAAGAAACAGTATTAAGCT
AGAAGATTTGAATGTCTGTTGATACATTTTGATTGGTGGGTAAATACGTA
AGTTCGTATGAAGCGAAATGACAATTATTAGATTTAGGCACCTTAGTGGT
ATTTTTTGATACTGCAGCAAAAAAAATTGTTATTTCCATTTTCTGTATTG
CGCAAATTTGCATTGGAAGTGGTACTATTCCAAATATAAAGATTGCTTTA
TTGACAGTGACTTTAGAAAGGTCTTATACTTTTATTAGCACACAGAAGTA
AACACAGGTAAAAAGGTTTATGTATCTATTATCATGTAAGGTTTACTTTG
CATTGTCTAAGAATATACGCACAGTACAGTATTTGTATAAATGTTAGCTA
GCAATCTAATCAGCTACAAACTACGACAATATTGATGTTGAAGAGATTTG
TAACCCGTCTTGTATTCACTACAGGAAATTCTTATTGCCGAGGTCAGTAA
CCTAACAGCGGAACTTCTTAAGAAAAGTGAGTCTTACTTACAACATCTAA
GCCCAAGTATCTAAGCTCAAACTATCAAAAAAATATATTGATAGTCAAGT
CAAGTCAAAGTTTACTGCACAACGATTGTAACAGGTACAATGTAAGGCAA
AAATAAAATACTACTGGCTACTTATATCAAACTACTAAAAGCTATAGGTA
GGTTCTATGCTATACAATGATTAGGTTCTATTCTGTACAATGCTCCATTT
CAAACTACATGAAGGCACTATCTATATAATATTGTCAAAGGTAGATGATA
TCAACATGAGATACAATAGGGAGTCGTATATGTCAATTATACAATTACAT
GATAAGGAGACGAATGTCTTATATAATCAAATCGCTATTTCACGAATTCT
TTTGATGATAAGTGCAAGTCACTGCAAGTGAAAAATGGTGGAATCTTAAA
TCGTGGAATCTTAAATCGTAACCCACGCTTACACAATTCCCACACTGTCC
ACAGCCAAACCGGAGAAACCCGTCTGTCCCGACGGTTATCTTCAGTTCGA
AGACAGGTGCTTCAACTTCTCTATCGAAAAGAAGACGTACACCGATGCCA
GATCCGCCTGCCAGGCTGCCGGCGGGCGTCTGGGTATGCCCAAGGACCAG
TTAACAAACGATTTCCTAACCAACCAGACAGAAACCAGGTACTTCGCATT
CAGTCGCTATATAGTCTGGTTCGGCCTGACAGACGAGGTCCGGGAGGGAA
CCTGGGTGTGGGAGGACGGGACGCCGCTCATCGGCTGGTCCGACTGGGCA
CAAGGAGAACCGGACGATTTCTTTAATCAGGACTGTGTAGGTTTTGGGTC
GAGATTCGGCCTCAAGTGGGAGGATGGTGGATGCTCCCTTGATACTTACT
ATGTGTGCGAAACAAAAGCTACCTTCCCTCCAGTTGATTACTAGAACACT
AGTACTGATTGAGCTACACTAAATACAGGATTGAAAGTTGATACCAATAA
TCTGGGCAATATCGGTTGCTATGGAGCGAGGTCGATTGTTATGTCCTATT
CTGCTGGGAGGTCATGTGACTGAAAATGTCTATTGTGGCAACCAAGATCT
TATCAATCGCTGTTCATTTGATTAGTCAGTCATGATTAAGTCAGCAGTTC
AGCAAGTTTTTGACTGGCATATCTATCAACTTAAGTTCGGTCGACGTATT
CTCCCAGTGGATGCATATTGCGACATTGATACTTACTATGTATGCGAAGT
AAAAGCTACATTTCCACCAGCCGATTGCTAGAACACTGGCCAGGAGCTAC
ATTGAATGCAGAGTTGGAAGATAAACGTGGGACACCGATAAGGTGGATAA
TATCCGTTGTTTTGGAGCGAGGTCAGTTGTTATGTTCTCTTCGACTTGGA
GGTCAGGCCCAGAGAAAAATGCCTGGAGAAAAATGCTGTTTCATTTTACG
GTCCTAAAATAAAATAAAACAAGAATTGGTACGTAGGGATAATACATGTA
TTTGTTTTAGATGTACGCCAAAGTTATCCAACAAATACAGGTTGAATAAT
GTAAAACTGAAATGCATGAGGACGCTGATTTTTTNATCTTAAATCGTGGA
ATCTTAAATCGTAACCCACGCTTACACAATTCCCACACTGTCCACAGCCA
AACCGGAGAAACCCGTCTGTCCCGACGGTTATCTTCAGTTCGAAGACAGG
TGCTTCAACTTCTCTATCGAAAAGAAGACGTACACCGATGCCAGATCCGC
CTGCCAGGCTGCCGGCGGGCGTCTGGGTATGCCCAAGGACCAGTTAACAA
ACGATTTCCTAACCAACCAGACAGAAACCAGGTACTTCGCATTCAGTCGC
TATATAGTCTGGTTCGGCCTGACAGACGAGGTCCGGGAGGGAACCTGGGT
GTGGGAGGACGGGACGCCGCTCATCGGCTGGTCCGACTGGGCACAAGGAG
AACCGGACGATTTCTTTAATCAGGACTGTGTAGGTTTTGGGTCGAGATTC
GGCCTCAAGTGGGAGGATGGTGGATGCTCCCTTGATACTTACTATGTGTG
CGAAACAAAAGCTACCTTCCCTCCAGTTGATTACTAG Coding sequence (CDS) from alignment at Sc0000010:3294754..3298340- >transcript:BL95200_evm0 ID=transcript:BL95200_evm0|Name=transcript:BL95200_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2880bp|location=Sequence derived from alignment at Sc0000010:3294754..3298340- (Branchiostoma lanceolatum)
ATGAAAGTGCCTGTGGTTGTTTTGGTTCTTGCTCTGCTGCAAGTGGTTGC
AGGGGAGACGGCTCCCAACTCTCCGGACCCGAGGACAGAGCAGTGCGTGT
GCAGCCCTGCCATCTACGTCGACTATGGAGACAAAAGGGACGAGGAGGCG
GACAGTAAAGTGCTGTACCAGCTTCGGACCCAGTTAACTTTGCTGCAGGG
GTCAGTGGAGTCACTTCGGACCCAACAGGAAATTCTTATTGCCGAGGTCA
GTAACCTAACAGCGGAACTTCTTAAGAAAACCAAACCGGAGAAACCCGTC
TGTCCCGACGGTTATCTTCAGTTCGAAGACAGGTGCTTCAACTTCTCTAT
CGAAAAGAAGACGTACACCGATGCCAGATCCGCCTGCCAGGCTGCCGGCG
GGCGTCTGGGTATGCCCAAGGACCAGTTAACAAACGATTTCCTAACCAAC
CAGACAGAAACCAGGTACTTCGCATTCAGTCGCTATATAGTCTGGTTCGG
CCTGACAGACGAGGTCCGGGAGGGAACCTGGGTGTGGGAGGACGGGACGC
CGCTCATCGGCTGGTCCGACTGGGCACAAGGAGAACCGGACGATTTCTTT
AATCAGGACTGTGTAGGTTTTGGGTCGAGATTCGGCCTCAAGTGGGAGGA
TGGTGGATGCTCCCTTGATACTTACTATGTGTGCGAAACAAAAGCTACCT
TCCCTCCAGTTGATTACTAGATGAAAGTGCCTGTGGTTGTTTTGGTTCTT
GCTCTGCTGCAAGTGGTTGCAGGGGAGACGGCTCCCAACTCTCCGGACCC
GAGGACAGAGCAGTGCGTGTGCAGCCCTGCCATCTACGTCGACTATGGAG
ACAAAAGGGACGAGGAGGCGGACAGTAAAGTGCTGTACCAGCTTCGGACC
CAGTTAACTTTGCTGCAGGGGTCAGTGGAGTCACTTCGGACCCAACAGGA
AATTCTTATTGCCGAGGTCAGTAACCTAACAGCGGAACTTCTTAAGAAAA
CCAAACCGGAGAAACCCGTCTGTCCCGACGGTTATCTTCAGTTCGAAGAC
AGGTGCTTCAACTTCTCTATCGAAAAGAAGACGTACACCGATGCCAGATC
CGCCTGCCAGGCTGCCGGCGGGCGTCTGGGTATGCCCAAGGACCAGTTAA
CAAACGATTTCCTAACCAACCAGACAGAAACCAGGTACTTCGCATTCAGT
CGCTATATAGTCTGGTTCGGCCTGACAGACGAGGTCCGGGAGGGAACCTG
GGTGTGGGAGGACGGGACGCCGCTCATCGGCTGGTCCGACTGGGCACAAG
GAGAACCGGACGATTTCTTTAATCAGGACTGTGTAGGTTTTGGGTCGAGA
TTCGGCCTCAAGTGGGAGGATGGTGGATGCTCCCTTGATACTTACTATGT
GTGCGAAACAAAAGCTACCTTCCCTCCAGTTGATTACTAGATGAAAGTGC
CTGTGGTTGTTTTGGTTCTTGCTCTGCTGCAAGTGGTTGCAGGGGAGACG
GCTCCCAACTCTCCGGACCCGAGGACAGAGCAGTGCGTGTGCAGCCCTGC
CATCTACGTCGACTATGGAGACAAAAGGGACGAGGAGGCGGACAGTAAAG
TGCTGTACCAGCTTCGGACCCAGTTAACTTTGCTGCAGGGGTCAGTGGAG
TCACTTCGGACCCAACAGGAAATTCTTATTGCCGAGGTCAGTAACCTAAC
AGCGGAACTTCTTAAGAAAACCAAACCGGAGAAACCCGTCTGTCCCGACG
GTTATCTTCAGTTCGAAGACAGGTGCTTCAACTTCTCTATCGAAAAGAAG
ACGTACACCGATGCCAGATCCGCCTGCCAGGCTGCCGGCGGGCGTCTGGG
TATGCCCAAGGACCAGTTAACAAACGATTTCCTAACCAACCAGACAGAAA
CCAGGTACTTCGCATTCAGTCGCTATATAGTCTGGTTCGGCCTGACAGAC
GAGGTCCGGGAGGGAACCTGGGTGTGGGAGGACGGGACGCCGCTCATCGG
CTGGTCCGACTGGGCACAAGGAGAACCGGACGATTTCTTTAATCAGGACT
GTGTAGGTTTTGGGTCGAGATTCGGCCTCAAGTGGGAGGATGGTGGATGC
TCCCTTGATACTTACTATGTGTGCGAAACAAAAGCTACCTTCCCTCCAGT
TGATTACTAGATGAAAGTGCCTGTGGTTGTTTTGGTTCTTGCTCTGCTGC
AAGTGGTTGCAGGGGAGACGGCTCCCAACTCTCCGGACCCGAGGACAGAG
CAGTGCGTGTGCAGCCCTGCCATCTACGTCGACTATGGAGACAAAAGGGA
CGAGGAGGCGGACAGTAAAGTGCTGTACCAGCTTCGGACCCAGTTAACTT
TGCTGCAGGGGTCAGTGGAGTCACTTCGGACCCAACAGGAAATTCTTATT
GCCGAGGTCAGTAACCTAACAGCGGAACTTCTTAAGAAAACCAAACCGGA
GAAACCCGTCTGTCCCGACGGTTATCTTCAGTTCGAAGACAGGTGCTTCA
ACTTCTCTATCGAAAAGAAGACGTACACCGATGCCAGATCCGCCTGCCAG
GCTGCCGGCGGGCGTCTGGGTATGCCCAAGGACCAGTTAACAAACGATTT
CCTAACCAACCAGACAGAAACCAGGTACTTCGCATTCAGTCGCTATATAG
TCTGGTTCGGCCTGACAGACGAGGTCCGGGAGGGAACCTGGGTGTGGGAG
GACGGGACGCCGCTCATCGGCTGGTCCGACTGGGCACAAGGAGAACCGGA
CGATTTCTTTAATCAGGACTGTGTAGGTTTTGGGTCGAGATTCGGCCTCA
AGTGGGAGGATGGTGGATGCTCCCTTGATACTTACTATGTGTGCGAAACA
AAAGCTACCTTCCCTCCAGTTGATTACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:3294754..3298340 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95200_evm0 |
| Biotype | protein_coding |
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