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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96539_cuf8 >transcript:BL96539_cuf8-protein ID=transcript:BL96539_cuf8-protein|Name=transcript:BL96539_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=226bp
ISLFGACTKDDPLAIVVEYAPNGCLRDWLKTNSAEAMNSEYQNQPDYASD
LPMEQLIQFGIDVSAGMSHLAAMQCVHRDLAARNILLGKNLVAKVSDFGL
SRDIYESEEYVKTAKSKLPLRWMAYESLFYSVYTTQSDVWSFGVLLWEIM
TMGHLPYEGMKGKQMMDIIKDGGRLEKPLHCPDELFALMEDCWKTLPEDR
PSFPQLKTNLERIIQSHKTYASLLLE Run BLAST on NCBI mRNA from alignment at Sc0000009:4325001..4328127- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96539_cuf8 ID=transcript:BL96539_cuf8|Name=transcript:BL96539_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=3127bp|location=Sequence derived from alignment at Sc0000009:4325001..4328127- (Branchiostoma lanceolatum)
ATCTCCCTGTTTGGGGCATGCACAAAAGATGGTGAGTTCATCAATTGAGT
TCATCAACAAGCTTAGATACGCTAGCAATGGGCACAGTCACTTGATACAC
TTATTATATACATTGTCATTCACATATCCCTCTAGATCCATTGGCCATTG
TGGTTGAGTACGCTCCCAATGGCTGTCTGAGGGACTGGCTGAAGACCAAC
TCTGCTGAGGCCATGAACTCGGAATACCAGAATCAGCCTGATTATGCTTC
TGACCTTCCCATGGAACAACTCATCCAGTTTGGCATCGATGTATCCGCTG
GGATGAGTCACCTAGCGGCTATGCAGGTAAAATATCCAAACATTCATGTG
TACGTTTCTGAAACACCGTAACTATCTGGAATGGTCTTTCATTACATACA
AACATGGTTGGTATTGTCAAACATTGAAGGTACACATCTTTCAATTCAGA
TAGTTAAATGTTGTCAACACCTGAGTGAGAATTGACAGACCTTATTTGAA
AGAATTGATTTATGAAAACATTGAATCAAAATCCTCCCCACAGTGTGTAC
ACCGTGACCTTGCAGCAAGGAACATCCTGCTTGGGAAGAACCTGGTGGCC
AAGGTGTCTGATTTCGGACTGTCCAGGGACATCTATGAAAGTGAAGAGTA
CGTTAAGACTGCAAAGGTAAGGGTTTGCGAGATATAGAAAACAGGGTGAG
TGTACAAACCTGTTTTGGGACGTCCTTCCATTGCAATCTATGATCTTACA
TTTGAAAAGTGTTCGACAATTTAATTGAATGATTCGACGACAGTTGTCAT
GTTATTTCTATCTCAGAGCAAGCTACCGTTGCGGTGGATGGCCTACGAGT
CACTGTTCTACAGTGTATACACAACTCAGAGTGACGTGTGAGTATGGGGA
TTTTCCATTTTACGTGAACATTGAATATAGTATACGTTATGGGTCTGACA
TATTTATTGATACCAAAAAAAATAATATCAATTTCAGTAGCTACATCTTA
GTTATTGCATGGTACTAGAAATGATACCGATCCTCATATTCTATATCATA
TACTTATCTATGACACATGCAAACAATTCACTTTAAAACCAATCATATGA
TTGCGTGCGTATGTGATACACGTTATTCACTTTCTTGTTCTCTATTCTGT
AGCTGGTCGTTTGGTGTTCTCTTGTGGGAGATTATGACCATGGGTATGCA
TGCACATTTATTTTTGATATCAAAGTGATATATGTATATTTGTCTGGAAA
AGTATTGTACATTGTAAAAAAAAAAAAAAAGAATATATAGAAAACTGGAA
CACTTGGAGAATTAGAAAAAGAGTGTATTTAGTCCGAAATTATGATTATG
GACATGCCATGTAGATTTGGTACTGACGTTCGCTATGTTTCGTAACTTTC
GTAATAGAGTGCACATTTAAATTTGAGCTGGGTTTGGATGCTAATGCATT
AAACATTTCATCCCCTCCCCACCCCATTGTAGGGCATCTGCCATACGAAG
GGATGAAGGGTAAACAGATGATGGATATAATCAAAGATGGCGGCCGGTTG
GAGAAGCCATTGCATTGTCCGGATGAACTGTAAGCATACATTCAGCAACA
TCCCGACTACAACTTGTCGGTATTGCTAAGTACATTCTAAAATCTACAAC
ATTTATCATTTGTTCCTGCTAAGGAAACATTAACGTGGCAAATCAAACAT
TAATGACCTTTTTATTGTCTAAAAATTTAAACCACTTTACAAAATATATC
TGCACAGCTTCGCCTTGATGGAAGACTGCTGGAAGACTCTGCCAGAAGAC
AGACCATCCTTCCCTCAGCTGAAAACTAACCTGGAAAGGATTATTCAATC
ACACAAGGTAACAGTCTATAAATATATATGTTTGATTTATGCCCTGTTTT
CATGTATACATGTAGCTATGTACATTTCCTGCCATTGCCAATTAGTAGAT
GAAGCGCCGGCGACAGATTCATCTTTGACAGGATGTCTTGGTCACGTTTA
GTCTACGAATGATCCCTTTGCGACTTTAAACTTAAACATGTATATTTTAA
TGCTTGATGTTCTGGTGTACTAAATTGCATCCTTTTTTCTCGTCAGACGT
ACGCTTCACTCCTTCTTGAATAGGATCTACGATCAGATATGAATGGATAT
ATCATATCATCGTCAACAGAACATTGTTAAAAAAGATATATATGTAGGTA
AACATGCATGAAGTGTGAACGGTAATATGTGAATTTCTTACACACATCGA
GCAAAATATGTAGTGTATTCTAATATTTTTTTGTGCCTTGACTTTATATG
GCAGTCAGGCACTTTTTGTTTCAACGAGCCTGAATTGTAATCGATTGATA
TTTAGTAGACAAATACACTTATTATCCAAATGTACTTGGTAGGCTTTTGT
TTCGCAATTATAGCCTTTAACTAACATTTTCTGAGCGTCTATTTGTTTCA
ATAGCTGGTATAGTAGGCGGATTCTTTTATTCAGTCTTATGATACGTAAT
AATAAATCTTAATTGTTGTGTGATACACGGACTCATGATAGAGATACAGG
AACGTTGAGTTGCAAAGGTCTTTATAGCTATATCACGACAACCTTGAACT
ATCTTAATTGCGTCAAGACATGGTATGTGTAAACCAATTTTTCAATTAGT
TTTAGTGTTATGAGTAACGGTAATATTTTCGGATAAAAGGTGTCTTCCAA
AGTTGATATTTTCTATAGAATATGGACTTTTACTGTTCATAGAGCATGTT
AAGACAATGTCCCACTAAATGTAAGCTAGTGTCCTTAGCTTACTAGTTAA
AAGATAAAATAAATGTTTTGTTTCAGTATTTACCTCTCATATGTTATGAA
TGATTCATGGTCACTTATAAACTTAAGCTGGATTATCTTGCTGGTGGAAG
TTTATGCTGAAATCACTACAACTATGTAAAAAAACATTCGTGCGAATTCT
CTCTGCAAGCAAATTAGAACAGTGCCTTAGCATCTTTTGAATTTATTTTC
CTTTTGTACGAGTACTGTTTTATTCGAAATAGCCTTTGTACCCAATTGTT
TGCATTGTTTAATACCTTGTGCAAAGATTAGCATATTGTTGACAACATGC
TTTGTGTCGAAGACTTTTAGAAATCAT Coding sequence (CDS) from alignment at Sc0000009:4325001..4328127- >transcript:BL96539_cuf8 ID=transcript:BL96539_cuf8|Name=transcript:BL96539_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=5448bp|location=Sequence derived from alignment at Sc0000009:4325001..4328127- (Branchiostoma lanceolatum)
ATCTCCCTGTTTGGGGCATGCACAAAAGATGATCCATTGGCCATTGTGGT
TGAGTACGCTCCCAATGGCTGTCTGAGGGACTGGCTGAAGACCAACTCTG
CTGAGGCCATGAACTCGGAATACCAGAATCAGCCTGATTATGCTTCTGAC
CTTCCCATGGAACAACTCATCCAGTTTGGCATCGATGTATCCGCTGGGAT
GAGTCACCTAGCGGCTATGCAGTGTGTACACCGTGACCTTGCAGCAAGGA
ACATCCTGCTTGGGAAGAACCTGGTGGCCAAGGTGTCTGATTTCGGACTG
TCCAGGGACATCTATGAAAGTGAAGAGTACGTTAAGACTGCAAAGAGCAA
GCTACCGTTGCGGTGGATGGCCTACGAGTCACTGTTCTACAGTGTATACA
CAACTCAGAGTGACGTCTGGTCGTTTGGTGTTCTCTTGTGGGAGATTATG
ACCATGGGGCATCTGCCATACGAAGGGATGAAGGGTAAACAGATGATGGA
TATAATCAAAGATGGCGGCCGGTTGGAGAAGCCATTGCATTGTCCGGATG
AACTCTTCGCCTTGATGGAAGACTGCTGGAAGACTCTGCCAGAAGACAGA
CCATCCTTCCCTCAGCTGAAAACTAACCTGGAAAGGATTATTCAATCACA
CAAGACGTACGCTTCACTCCTTCTTGAATAGATCTCCCTGTTTGGGGCAT
GCACAAAAGATGATCCATTGGCCATTGTGGTTGAGTACGCTCCCAATGGC
TGTCTGAGGGACTGGCTGAAGACCAACTCTGCTGAGGCCATGAACTCGGA
ATACCAGAATCAGCCTGATTATGCTTCTGACCTTCCCATGGAACAACTCA
TCCAGTTTGGCATCGATGTATCCGCTGGGATGAGTCACCTAGCGGCTATG
CAGTGTGTACACCGTGACCTTGCAGCAAGGAACATCCTGCTTGGGAAGAA
CCTGGTGGCCAAGGTGTCTGATTTCGGACTGTCCAGGGACATCTATGAAA
GTGAAGAGTACGTTAAGACTGCAAAGAGCAAGCTACCGTTGCGGTGGATG
GCCTACGAGTCACTGTTCTACAGTGTATACACAACTCAGAGTGACGTCTG
GTCGTTTGGTGTTCTCTTGTGGGAGATTATGACCATGGGGCATCTGCCAT
ACGAAGGGATGAAGGGTAAACAGATGATGGATATAATCAAAGATGGCGGC
CGGTTGGAGAAGCCATTGCATTGTCCGGATGAACTCTTCGCCTTGATGGA
AGACTGCTGGAAGACTCTGCCAGAAGACAGACCATCCTTCCCTCAGCTGA
AAACTAACCTGGAAAGGATTATTCAATCACACAAGACGTACGCTTCACTC
CTTCTTGAATAGATCTCCCTGTTTGGGGCATGCACAAAAGATGATCCATT
GGCCATTGTGGTTGAGTACGCTCCCAATGGCTGTCTGAGGGACTGGCTGA
AGACCAACTCTGCTGAGGCCATGAACTCGGAATACCAGAATCAGCCTGAT
TATGCTTCTGACCTTCCCATGGAACAACTCATCCAGTTTGGCATCGATGT
ATCCGCTGGGATGAGTCACCTAGCGGCTATGCAGTGTGTACACCGTGACC
TTGCAGCAAGGAACATCCTGCTTGGGAAGAACCTGGTGGCCAAGGTGTCT
GATTTCGGACTGTCCAGGGACATCTATGAAAGTGAAGAGTACGTTAAGAC
TGCAAAGAGCAAGCTACCGTTGCGGTGGATGGCCTACGAGTCACTGTTCT
ACAGTGTATACACAACTCAGAGTGACGTCTGGTCGTTTGGTGTTCTCTTG
TGGGAGATTATGACCATGGGGCATCTGCCATACGAAGGGATGAAGGGTAA
ACAGATGATGGATATAATCAAAGATGGCGGCCGGTTGGAGAAGCCATTGC
ATTGTCCGGATGAACTCTTCGCCTTGATGGAAGACTGCTGGAAGACTCTG
CCAGAAGACAGACCATCCTTCCCTCAGCTGAAAACTAACCTGGAAAGGAT
TATTCAATCACACAAGACGTACGCTTCACTCCTTCTTGAATAGATCTCCC
TGTTTGGGGCATGCACAAAAGATGATCCATTGGCCATTGTGGTTGAGTAC
GCTCCCAATGGCTGTCTGAGGGACTGGCTGAAGACCAACTCTGCTGAGGC
CATGAACTCGGAATACCAGAATCAGCCTGATTATGCTTCTGACCTTCCCA
TGGAACAACTCATCCAGTTTGGCATCGATGTATCCGCTGGGATGAGTCAC
CTAGCGGCTATGCAGTGTGTACACCGTGACCTTGCAGCAAGGAACATCCT
GCTTGGGAAGAACCTGGTGGCCAAGGTGTCTGATTTCGGACTGTCCAGGG
ACATCTATGAAAGTGAAGAGTACGTTAAGACTGCAAAGAGCAAGCTACCG
TTGCGGTGGATGGCCTACGAGTCACTGTTCTACAGTGTATACACAACTCA
GAGTGACGTCTGGTCGTTTGGTGTTCTCTTGTGGGAGATTATGACCATGG
GGCATCTGCCATACGAAGGGATGAAGGGTAAACAGATGATGGATATAATC
AAAGATGGCGGCCGGTTGGAGAAGCCATTGCATTGTCCGGATGAACTCTT
CGCCTTGATGGAAGACTGCTGGAAGACTCTGCCAGAAGACAGACCATCCT
TCCCTCAGCTGAAAACTAACCTGGAAAGGATTATTCAATCACACAAGACG
TACGCTTCACTCCTTCTTGAATAGATCTCCCTGTTTGGGGCATGCACAAA
AGATGATCCATTGGCCATTGTGGTTGAGTACGCTCCCAATGGCTGTCTGA
GGGACTGGCTGAAGACCAACTCTGCTGAGGCCATGAACTCGGAATACCAG
AATCAGCCTGATTATGCTTCTGACCTTCCCATGGAACAACTCATCCAGTT
TGGCATCGATGTATCCGCTGGGATGAGTCACCTAGCGGCTATGCAGTGTG
TACACCGTGACCTTGCAGCAAGGAACATCCTGCTTGGGAAGAACCTGGTG
GCCAAGGTGTCTGATTTCGGACTGTCCAGGGACATCTATGAAAGTGAAGA
GTACGTTAAGACTGCAAAGAGCAAGCTACCGTTGCGGTGGATGGCCTACG
AGTCACTGTTCTACAGTGTATACACAACTCAGAGTGACGTCTGGTCGTTT
GGTGTTCTCTTGTGGGAGATTATGACCATGGGGCATCTGCCATACGAAGG
GATGAAGGGTAAACAGATGATGGATATAATCAAAGATGGCGGCCGGTTGG
AGAAGCCATTGCATTGTCCGGATGAACTCTTCGCCTTGATGGAAGACTGC
TGGAAGACTCTGCCAGAAGACAGACCATCCTTCCCTCAGCTGAAAACTAA
CCTGGAAAGGATTATTCAATCACACAAGACGTACGCTTCACTCCTTCTTG
AATAGATCTCCCTGTTTGGGGCATGCACAAAAGATGATCCATTGGCCATT
GTGGTTGAGTACGCTCCCAATGGCTGTCTGAGGGACTGGCTGAAGACCAA
CTCTGCTGAGGCCATGAACTCGGAATACCAGAATCAGCCTGATTATGCTT
CTGACCTTCCCATGGAACAACTCATCCAGTTTGGCATCGATGTATCCGCT
GGGATGAGTCACCTAGCGGCTATGCAGTGTGTACACCGTGACCTTGCAGC
AAGGAACATCCTGCTTGGGAAGAACCTGGTGGCCAAGGTGTCTGATTTCG
GACTGTCCAGGGACATCTATGAAAGTGAAGAGTACGTTAAGACTGCAAAG
AGCAAGCTACCGTTGCGGTGGATGGCCTACGAGTCACTGTTCTACAGTGT
ATACACAACTCAGAGTGACGTCTGGTCGTTTGGTGTTCTCTTGTGGGAGA
TTATGACCATGGGGCATCTGCCATACGAAGGGATGAAGGGTAAACAGATG
ATGGATATAATCAAAGATGGCGGCCGGTTGGAGAAGCCATTGCATTGTCC
GGATGAACTCTTCGCCTTGATGGAAGACTGCTGGAAGACTCTGCCAGAAG
ACAGACCATCCTTCCCTCAGCTGAAAACTAACCTGGAAAGGATTATTCAA
TCACACAAGACGTACGCTTCACTCCTTCTTGAATAGATCTCCCTGTTTGG
GGCATGCACAAAAGATGATCCATTGGCCATTGTGGTTGAGTACGCTCCCA
ATGGCTGTCTGAGGGACTGGCTGAAGACCAACTCTGCTGAGGCCATGAAC
TCGGAATACCAGAATCAGCCTGATTATGCTTCTGACCTTCCCATGGAACA
ACTCATCCAGTTTGGCATCGATGTATCCGCTGGGATGAGTCACCTAGCGG
CTATGCAGTGTGTACACCGTGACCTTGCAGCAAGGAACATCCTGCTTGGG
AAGAACCTGGTGGCCAAGGTGTCTGATTTCGGACTGTCCAGGGACATCTA
TGAAAGTGAAGAGTACGTTAAGACTGCAAAGAGCAAGCTACCGTTGCGGT
GGATGGCCTACGAGTCACTGTTCTACAGTGTATACACAACTCAGAGTGAC
GTCTGGTCGTTTGGTGTTCTCTTGTGGGAGATTATGACCATGGGGCATCT
GCCATACGAAGGGATGAAGGGTAAACAGATGATGGATATAATCAAAGATG
GCGGCCGGTTGGAGAAGCCATTGCATTGTCCGGATGAACTCTTCGCCTTG
ATGGAAGACTGCTGGAAGACTCTGCCAGAAGACAGACCATCCTTCCCTCA
GCTGAAAACTAACCTGGAAAGGATTATTCAATCACACAAGACGTACGCTT
CACTCCTTCTTGAATAGATCTCCCTGTTTGGGGCATGCACAAAAGATGAT
CCATTGGCCATTGTGGTTGAGTACGCTCCCAATGGCTGTCTGAGGGACTG
GCTGAAGACCAACTCTGCTGAGGCCATGAACTCGGAATACCAGAATCAGC
CTGATTATGCTTCTGACCTTCCCATGGAACAACTCATCCAGTTTGGCATC
GATGTATCCGCTGGGATGAGTCACCTAGCGGCTATGCAGTGTGTACACCG
TGACCTTGCAGCAAGGAACATCCTGCTTGGGAAGAACCTGGTGGCCAAGG
TGTCTGATTTCGGACTGTCCAGGGACATCTATGAAAGTGAAGAGTACGTT
AAGACTGCAAAGAGCAAGCTACCGTTGCGGTGGATGGCCTACGAGTCACT
GTTCTACAGTGTATACACAACTCAGAGTGACGTCTGGTCGTTTGGTGTTC
TCTTGTGGGAGATTATGACCATGGGGCATCTGCCATACGAAGGGATGAAG
GGTAAACAGATGATGGATATAATCAAAGATGGCGGCCGGTTGGAGAAGCC
ATTGCATTGTCCGGATGAACTCTTCGCCTTGATGGAAGACTGCTGGAAGA
CTCTGCCAGAAGACAGACCATCCTTCCCTCAGCTGAAAACTAACCTGGAA
AGGATTATTCAATCACACAAGACGTACGCTTCACTCCTTCTTGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000009 | genome | Sc0000009:4325001..4328127 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96539_cuf8 |
| Biotype | protein_coding |
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