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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87071_cuf0 >transcript:BL87071_cuf0-protein ID=transcript:BL87071_cuf0-protein|Name=transcript:BL87071_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=615bp
RVRQINYKLDGLNAKKANLVQVLREQLSEETFAETEKFITHGQLSQHEKG
KVRQKNKFERLEQKEMFSSADKDPNWRSSSSKPKIIAPSRTDERWVKNLS
SHTLTEPEESLLSKGLNFAVAPNKIPNIDIITETESAIRRAHIPYKQAEA
LRTKVATTLKVSKPPSSNITREEQTALKDLATNQDIVILPADKGRCTVVL
DREQYDGKVQDLLGDKDTYRPLKKNPTNKFKKEIHKALEKLKDDKFLDQA
TYFKLNPNTEQPPAFYGLPKIHKPGVPLRPIVSGIGSVTYNLAGYLAKIL
GPLVGKSQHHVQNSADFVQKIKDITVAEDEIITSYDVCSLFTCIPPKEAV
SVVREALEADDTLADRTKLSVDHICELLDLCLGCTYFTYKQQFFQQVHGC
AMGSPVSPIVVNLYMEKFENKALSTFNGPPPANWFRYVDDTWCRLKKRVA
DDFFDHINQVDDNIKFTQESCQNNMLPFLDTKTIIEKDGNLQFEVYRKPT
HTDQYLAFDSHHPLEHKLAVIKTLFHRADNVITSDEAKTEEHRHLRVALA
KCGYQNWTFNKALKPSDQSKKTLKCRPLTNRNKANITIPYVQGVSEKLRR
IFQNFNIATNFKPHS Run BLAST on NCBI mRNA from alignment at Sc0000004:576230..578077+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87071_cuf0 ID=transcript:BL87071_cuf0|Name=transcript:BL87071_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1848bp|location=Sequence derived from alignment at Sc0000004:576230..578077+ (Branchiostoma lanceolatum)
GAGGGTAAGACAGATCAACTATAAACTGGACGGGCTGAACGCGAAAAAAG
CTAACCTGGTACAAGTACTGAGGGAACAACTGTCAGAAGAGACCTTTGCA
GAAACTGAGAAATTCATAACACACGGACAGCTCTCTCAACACGAGAAAGG
AAAAGTCAGACAGAAGAACAAATTTGAACGTTTGGAACAGAAGGAAATGT
TTAGTTCAGCAGACAAGGACCCCAACTGGAGATCTAGCAGTTCCAAACCC
AAAATCATAGCACCAAGTAGAACAGACGAGAGGTGGGTTAAGAACCTGAG
CAGTCACACTCTTACAGAACCGGAGGAATCCCTACTTTCCAAAGGGCTAA
ATTTCGCAGTAGCGCCTAACAAGATCCCCAATATTGACATTATCACAGAA
ACTGAATCAGCAATTCGTCGGGCCCATATACCATATAAACAGGCTGAAGC
CTTACGCACCAAAGTAGCCACCACTCTGAAAGTCTCTAAACCCCCTTCTA
GCAACATCACCCGGGAAGAACAAACTGCGCTCAAGGATTTGGCCACTAAT
CAAGACATAGTGATCCTTCCCGCGGACAAGGGCAGATGCACAGTAGTCTT
AGACAGAGAACAGTATGACGGAAAAGTTCAAGACCTATTAGGGGACAAAG
ACACATACAGGCCCTTGAAAAAGAACCCCACAAACAAGTTCAAAAAGGAA
ATCCATAAAGCTCTCGAGAAATTGAAAGATGACAAGTTTCTGGACCAGGC
CACCTATTTCAAGCTCAATCCCAATACAGAACAACCCCCAGCATTCTACG
GCCTTCCCAAAATCCACAAACCCGGTGTCCCTCTACGACCCATAGTATCC
GGTATAGGATCTGTCACTTATAACCTAGCAGGTTATCTGGCTAAGATCTT
GGGACCGTTGGTGGGAAAGTCTCAACACCATGTACAGAATAGTGCAGACT
TCGTCCAAAAAATCAAAGACATCACTGTAGCAGAAGATGAAATCATCACT
TCATATGATGTGTGCTCGCTTTTCACTTGCATACCCCCTAAGGAGGCAGT
ATCGGTAGTTAGGGAAGCCTTGGAGGCCGACGACACACTTGCAGACAGAA
CCAAACTCTCCGTGGACCACATATGCGAACTGCTAGACCTCTGCCTAGGG
TGCACTTATTTCACTTACAAACAACAGTTTTTCCAGCAAGTGCACGGCTG
TGCTATGGGATCACCGGTATCGCCCATTGTTGTGAACCTGTATATGGAGA
AGTTTGAGAACAAAGCCCTCAGTACTTTCAATGGCCCTCCCCCAGCAAAC
TGGTTTCGCTATGTAGACGACACTTGGTGTAGGCTAAAGAAGAGAGTAGC
TGATGACTTCTTTGACCATATTAACCAGGTAGATGACAACATCAAGTTCA
CACAGGAGTCGTGTCAAAACAACATGCTCCCCTTCTTAGACACCAAAACC
ATCATAGAGAAGGATGGCAACCTTCAGTTCGAAGTGTACAGGAAACCGAC
CCACACTGATCAATATCTGGCCTTTGATTCCCATCACCCTTTGGAACACA
AACTAGCAGTGATTAAAACTCTCTTCCATCGAGCAGACAATGTCATTACC
TCAGACGAAGCAAAAACAGAAGAACACAGACATCTCCGTGTGGCTTTAGC
CAAGTGTGGCTACCAAAATTGGACCTTCAACAAGGCCCTCAAACCTTCTG
ACCAGTCTAAGAAAACACTCAAGTGCAGACCATTGACCAACAGAAACAAG
GCCAACATTACCATTCCCTACGTCCAAGGAGTATCGGAAAAACTCAGACG
TATCTTCCAAAACTTCAACATTGCCACTAACTTCAAACCTCACTCAAC Coding sequence (CDS) from alignment at Sc0000004:576230..578077+ >transcript:BL87071_cuf0 ID=transcript:BL87071_cuf0|Name=transcript:BL87071_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1845bp|location=Sequence derived from alignment at Sc0000004:576230..578077+ (Branchiostoma lanceolatum)
AGGGTAAGACAGATCAACTATAAACTGGACGGGCTGAACGCGAAAAAAGC
TAACCTGGTACAAGTACTGAGGGAACAACTGTCAGAAGAGACCTTTGCAG
AAACTGAGAAATTCATAACACACGGACAGCTCTCTCAACACGAGAAAGGA
AAAGTCAGACAGAAGAACAAATTTGAACGTTTGGAACAGAAGGAAATGTT
TAGTTCAGCAGACAAGGACCCCAACTGGAGATCTAGCAGTTCCAAACCCA
AAATCATAGCACCAAGTAGAACAGACGAGAGGTGGGTTAAGAACCTGAGC
AGTCACACTCTTACAGAACCGGAGGAATCCCTACTTTCCAAAGGGCTAAA
TTTCGCAGTAGCGCCTAACAAGATCCCCAATATTGACATTATCACAGAAA
CTGAATCAGCAATTCGTCGGGCCCATATACCATATAAACAGGCTGAAGCC
TTACGCACCAAAGTAGCCACCACTCTGAAAGTCTCTAAACCCCCTTCTAG
CAACATCACCCGGGAAGAACAAACTGCGCTCAAGGATTTGGCCACTAATC
AAGACATAGTGATCCTTCCCGCGGACAAGGGCAGATGCACAGTAGTCTTA
GACAGAGAACAGTATGACGGAAAAGTTCAAGACCTATTAGGGGACAAAGA
CACATACAGGCCCTTGAAAAAGAACCCCACAAACAAGTTCAAAAAGGAAA
TCCATAAAGCTCTCGAGAAATTGAAAGATGACAAGTTTCTGGACCAGGCC
ACCTATTTCAAGCTCAATCCCAATACAGAACAACCCCCAGCATTCTACGG
CCTTCCCAAAATCCACAAACCCGGTGTCCCTCTACGACCCATAGTATCCG
GTATAGGATCTGTCACTTATAACCTAGCAGGTTATCTGGCTAAGATCTTG
GGACCGTTGGTGGGAAAGTCTCAACACCATGTACAGAATAGTGCAGACTT
CGTCCAAAAAATCAAAGACATCACTGTAGCAGAAGATGAAATCATCACTT
CATATGATGTGTGCTCGCTTTTCACTTGCATACCCCCTAAGGAGGCAGTA
TCGGTAGTTAGGGAAGCCTTGGAGGCCGACGACACACTTGCAGACAGAAC
CAAACTCTCCGTGGACCACATATGCGAACTGCTAGACCTCTGCCTAGGGT
GCACTTATTTCACTTACAAACAACAGTTTTTCCAGCAAGTGCACGGCTGT
GCTATGGGATCACCGGTATCGCCCATTGTTGTGAACCTGTATATGGAGAA
GTTTGAGAACAAAGCCCTCAGTACTTTCAATGGCCCTCCCCCAGCAAACT
GGTTTCGCTATGTAGACGACACTTGGTGTAGGCTAAAGAAGAGAGTAGCT
GATGACTTCTTTGACCATATTAACCAGGTAGATGACAACATCAAGTTCAC
ACAGGAGTCGTGTCAAAACAACATGCTCCCCTTCTTAGACACCAAAACCA
TCATAGAGAAGGATGGCAACCTTCAGTTCGAAGTGTACAGGAAACCGACC
CACACTGATCAATATCTGGCCTTTGATTCCCATCACCCTTTGGAACACAA
ACTAGCAGTGATTAAAACTCTCTTCCATCGAGCAGACAATGTCATTACCT
CAGACGAAGCAAAAACAGAAGAACACAGACATCTCCGTGTGGCTTTAGCC
AAGTGTGGCTACCAAAATTGGACCTTCAACAAGGCCCTCAAACCTTCTGA
CCAGTCTAAGAAAACACTCAAGTGCAGACCATTGACCAACAGAAACAAGG
CCAACATTACCATTCCCTACGTCCAAGGAGTATCGGAAAAACTCAGACGT
ATCTTCCAAAACTTCAACATTGCCACTAACTTCAAACCTCACTCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:576230..578077 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87071_cuf0 |
| Biotype | protein_coding |
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