transcript:BL95025_evm4 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95025_evm4
Unique Nametranscript:BL95025_evm4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95025_evm4

>transcript:BL95025_evm4-protein ID=transcript:BL95025_evm4-protein|Name=transcript:BL95025_evm4|organism=Branchiostoma lanceolatum|type=polypeptide|length=108bp
MVQKLKGTTFSVNHSLSGDKFTSKFEFNGKPQESTFTLGVEGEEHDQTVG
RKRKVTYTIEGDNLVSVFPDHDGKGTPMRVSRHFIDDDTIHIDVTVGGVE
GWRTYKSC
Run BLAST on NCBI

mRNA from alignment at Sc0000001:7935003..7935825-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95025_evm4 ID=transcript:BL95025_evm4|Name=transcript:BL95025_evm4|organism=Branchiostoma lanceolatum|type=mRNA|length=823bp|location=Sequence derived from alignment at Sc0000001:7935003..7935825- (Branchiostoma lanceolatum)
ATGGTTCAGAAACTAAAGGGGACGACGTTCTCCGTCAACCATTCTCTGTC AGGGGACAAGTTCACATCTAAGTTTGAGTTCAATGGGAAACCCCAAGAGA GCACCTTCACCTTGGGGGTGGAAGGCGAGGAACACGATCAAACTGTTGGC AGGAAGAGAAAGGTGGGGTACAGAACAAACGTAGCCAACAGTAGGTTTCT GCATCATAACATTATCTTTATAATTGTAATAATAACTTTATAGCGCAACT ATTAGATGAGATACAACGTTTGACAACTTCTATTGCTCAACAACAATTGT AGGAAACTCTAGATCTACTCACAGAACACTACGTAGTATAGTACTATGAC GCTATATACTCTTCAACACTAAGGCATTTTTTATGTTCGGTTATAGATTT ACAATATACACTATGTACACTTAAATTGGGTCCTTCTATCCATTGAGATA AATCTTGTTTAGAAGATGGCAGACATGATTACGCTTGTCTACGCTTATCC TTCTCTTACCCTGTCCTTCAGGTGACTTACACCATAGAGGGAGACAACCT GGTGTCTGTGTTCCCTGACCATGATGGCAAGGGAACTCCCATGCGTGTCA GCCGCCATTTTATTGATGACGACACCATCCACATAGTGAGTGTTCTGAAG AGTACAAAAAAGTAGCTTTTCTAAGAATTTGGCTCGGGAGATTTCAACTT CACAAATTCACAAACTTTCAACAAACACTTGGCCAATACAGATTACTTAT TCACCCATTCACTTACTTGCAGGATGTCACCGTTGGTGGTGTTGAGGGCT GGAGAACTTACAAGAGCTGCTAG

Coding sequence (CDS) from alignment at Sc0000001:7935003..7935825-

>transcript:BL95025_evm4 ID=transcript:BL95025_evm4|Name=transcript:BL95025_evm4|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000001:7935003..7935825- (Branchiostoma lanceolatum)
ATGGTTCAGAAACTAAAGGGGACGACGTTCTCCGTCAACCATTCTCTGTC
AGGGGACAAGTTCACATCTAAGTTTGAGTTCAATGGGAAACCCCAAGAGA
GCACCTTCACCTTGGGGGTGGAAGGCGAGGAACACGATCAAACTGTTGGC
AGGAAGAGAAAGGTGACTTACACCATAGAGGGAGACAACCTGGTGTCTGT
GTTCCCTGACCATGATGGCAAGGGAACTCCCATGCGTGTCAGCCGCCATT
TTATTGATGACGACACCATCCACATAGATGTCACCGTTGGTGGTGTTGAG
GGCTGGAGAACTTACAAGAGCTGCTAGATGGTTCAGAAACTAAAGGGGAC
GACGTTCTCCGTCAACCATTCTCTGTCAGGGGACAAGTTCACATCTAAGT
TTGAGTTCAATGGGAAACCCCAAGAGAGCACCTTCACCTTGGGGGTGGAA
GGCGAGGAACACGATCAAACTGTTGGCAGGAAGAGAAAGGTGACTTACAC
CATAGAGGGAGACAACCTGGTGTCTGTGTTCCCTGACCATGATGGCAAGG
GAACTCCCATGCGTGTCAGCCGCCATTTTATTGATGACGACACCATCCAC
ATAGATGTCACCGTTGGTGGTGTTGAGGGCTGGAGAACTTACAAGAGCTG
CTAGATGGTTCAGAAACTAAAGGGGACGACGTTCTCCGTCAACCATTCTC
TGTCAGGGGACAAGTTCACATCTAAGTTTGAGTTCAATGGGAAACCCCAA
GAGAGCACCTTCACCTTGGGGGTGGAAGGCGAGGAACACGATCAAACTGT
TGGCAGGAAGAGAAAGGTGACTTACACCATAGAGGGAGACAACCTGGTGT
CTGTGTTCCCTGACCATGATGGCAAGGGAACTCCCATGCGTGTCAGCCGC
CATTTTATTGATGACGACACCATCCACATAGATGTCACCGTTGGTGGTGT
TGAGGGCTGGAGAACTTACAAGAGCTGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95025gene:BL95025Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95025_evm4-E1BL95025_evm4-E1-1564476830-29463Branchiostoma lanceolatumexon
BL95025_evm4-E2BL95025_evm4-E2-1564476830-29461Branchiostoma lanceolatumexon
BL95025_evm4-E3BL95025_evm4-E3-1564476830-29459Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95025_evm4transcript:BL95025_evm4-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000001genomeSc0000001:7935003..7935825 -
Properties
Property NameValue
Transcript idBL95025_evm4
Biotypeprotein_coding