|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003817 ID=TCONS_00003817|Name=TCONS_00003817|organism=Clytia hemisphaerica|type=transcript|length=1214bp
GTTTTATCCGATGTTACATCCGCTACAATTCCCATTGTGTCTAGAGAGTT
TAAGTTCTTTTAACCttcaataaataaaaagttatatGTACAGataatat
attaaatatttttagaaaagtataaaaaataatgaagtaTATGTACAATC
TTCCGTTAACGAAATTCTATCAAAATACTCTTTCAAATACTCTATCTTAT
TTCCAATGGGGATATGAAATCTATTAGTTTCAGCTGAAAAATTCTAAATG
GGGTCCACCGTTTCTTTGCCCAAACTCGTATCTAGTCCCGCTCACGATTG
TATCACGTCCATAAGTAAAATCTAAAAGGGATACAAgaggctctgggtac
gagatggGATCACTGGGTCTTTGACACGAGGGCATGAAGTAGTCTTTAGC
TGAGGTTTAGTCATAAATGATGATTCACAGTCGATTTGAGAATCTTTTAT
CCTTGACCCTTGCATGTGAATTTGTGTTCATATCAGTTTAACCAAGTGTC
ACCAGAGAAGAAATCAGCGTTCAAACTCTACTGCATTATCTGTATCGCAT
TTCTCATCAGGGTTTATCCTGGTCAACCAGTCCATCTTACATTTTAAACT
TTGATTAAGCAAGTCATCACATCATGTGgtcaaaaagtcagaaagtcAAA
AATTGATGACAAGACTGATGAACTTCTTGAGTTTTCTTACTTGATAAGAA
AACTTATCAAATTCAGTATTGCCAAGTTTTACAGCTCATCAAATGTGTTT
ATTGACCAAGAGCAAACTCTGGTATCTTCATTGGCTTGGCAGACAAAGAA
TGTTGAATCTAGTTTAACAGCAAGTCTCTTTACAAACTAGTGCTTCTTGA
AGAGAGAGACGAGGAGCTAATCTGACGCGACCACGTGGGTGAGGTTCGTC
GTGAATTGGCGCCCGATGCACCGACATAACTTCCAGGTCTAGATCCTGAG
TTTGAATTATTGGAATTTTTTCGTTCGTATCTCTTGTTGAGAGAATCTCC
AGCTTTGGCCAATGCTGATCCAAATTGAGTGCTCATTGAAGAATACATGa
tggttcaatttttcattaaatttttctatTGAAGAAAAAGATATAAATGT
ATTGTTAAACTATTACAAACTATCCAGGATCTAACgattttaattagttt
ttgACACGTTAGCAAACGTCGCGTGAACAATATCCTGACTTAAAGTTTGA
AAGTACTGGACCTG Run BLAST on NCBI transcript from alignment at sc0000031:739509..740722- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003817 ID=TCONS_00003817|Name=TCONS_00003817|organism=Clytia hemisphaerica|type=transcript|length=1214bp|location=Sequence derived from alignment at sc0000031:739509..740722- (Clytia hemisphaerica)
GTTTTATCCGATGTTACATCCGCTACAATTCCCATTGTGTCTAGAGAGTT
TAAGTTCTTTTAACCTTCAATAAATAAAAAGTTATATGTACAGATAATAT
ATTAAATATTTTTAGAAAAGTATAAAAAATAATGAAGTATATGTACAATC
TTCCGTTAACGAAATTCTATCAAAATACTCTTTCAAATACTCTATCTTAT
TTCCAATGGGGATATGAAATCTATTAGTTTCAGCTGAAAAATTCTAAATG
GGGTCCACCGTTTCTTTGCCCAAACTCGTATCTAGTCCCGCTCACGATTG
TATCACGTCCATAAGTAAAATCTAAAAGGGATACAAGAGGCTCTGGGTAC
GAGATGGGATCACTGGGTCTTTGACACGAGGGCATGAAGTAGTCTTTAGC
TGAGGTTTAGTCATAAATGATGATTCACAGTCGATTTGAGAATCTTTTAT
CCTTGACCCTTGCATGTGAATTTGTGTTCATATCAGTTTAACCAAGTGTC
ACCAGAGAAGAAATCAGCGTTCAAACTCTACTGCATTATCTGTATCGCAT
TTCTCATCAGGGTTTATCCTGGTCAACCAGTCCATCTTACATTTTAAACT
TTGATTAAGCAAGTCATCACATCATGTGGTCAAAAAGTCAGAAAGTCAAA
AATTGATGACAAGACTGATGAACTTCTTGAGTTTTCTTACTTGATAAGAA
AACTTATCAAATTCAGTATTGCCAAGTTTTACAGCTCATCAAATGTGTTT
ATTGACCAAGAGCAAACTCTGGTATCTTCATTGGCTTGGCAGACAAAGAA
TGTTGAATCTAGTTTAACAGCAAGTCTCTTTACAAACTAGTGCTTCTTGA
AGAGAGAGACGAGGAGCTAATCTGACGCGACCACGTGGGTGAGGTTCGTC
GTGAATTGGCGCCCGATGCACCGACATAACTTCCAGGTCTAGATCCTGAG
TTTGAATTATTGGAATTTTTTCGTTCGTATCTCTTGTTGAGAGAATCTCC
AGCTTTGGCCAATGCTGATCCAAATTGAGTGCTCATTGAAGAATACATGA
TGGTTCAATTTTTCATTAAATTTTTCTATTGAAGAAAAAGATATAAATGT
ATTGTTAAACTATTACAAACTATCCAGGATCTAACGATTTTAATTAGTTT
TTGACACGTTAGCAAACGTCGCGTGAACAATATCCTGACTTAAAGTTTGA
AAGTACTGGACCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003817-exon-sc0000031-1575043694:739509..740722 | TCONS_00003817-exon-sc0000031-1575043694:739509..740722 | Clytia hemisphaerica | exon |
| TCONS_00003817-exon-sc0000031-1510915933:739509..740722 | TCONS_00003817-exon-sc0000031-1510915933:739509..740722 | Clytia hemisphaerica | exon |
| TCONS_00003817-exon-sc0000031-1491911889:739509..740722 | TCONS_00003817-exon-sc0000031-1491911889:739509..740722 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000031 | supercontig | sc0000031:739509..740722 - |
Blast
The following BLAST results are available for this feature:
|
