TCONS_00000269 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00000269
Unique Name	TCONS_00000269
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2960

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000001:2611662..2625905-

transcript sequence

>TCONS_00000269 ID=TCONS_00000269|Name=TCONS_00000269|organism=Clytia hemisphaerica|type=transcript|length=2960bp
AAAATAATAAATCGAGAGGGAATATctctttaaatattttcatttggatG
CATGTTGTTATAGCTTATGTTTTGACCGTATGGAGGGTATACACATAACT
TTCTAGTGGTGTTAGTATGGAAATTCTATGAAAATCAAGCTtctaaattt
cattattttgaagTAGAGACGGAACTCTTTTTAATTTGTATCAGTTGGAA
ATTTTTTCGCAAagacaagaaattcaaaaaaagttatttaagttgacata
aacaaaaaaacattatgGTTCTTAAGTCAAAGAAAGGTGCAACGACAGTC
ACAAAAAACGGACGTAAATTAACTAAATCACGTAAAAAGGAGAGCACATT
AGAACCCAGTGCCCCACCTAAAGAAGAAGTtgtggatgatgaagaaaaag
tTGTTCTACCGCCACTCTCTAATAACAGCAACGACTTAGTTGGTACAAAT
CGAGGGTCCGCAGACCGCGATAGTCTCTTAGACGAGGAGAATTTTACACC
TAGGAGTATGGAAATTGAAGGGCAGGGCGGCGCTGGGAAGCCGGCGCGAA
GTTATGAAGAGGCGCTCTCGAGTGACAGGCGTGCTGATGAGGGAATGAAT
TCACCGCCACCCAGTGGCGTGTTGAATAAAgGTATTCTCACCCGCAGAAA
TATAAACGACCGTACATACGACCGTACATACGACCGATTCACCGATCCCT
TTTACGCGAAAGCGCCACGCCGTAATTTGAGCCGTCTTTCAAACATATCT
TACGAACGTGGCTACCCGGATGCAGCTACGTACAACGGGCGTTACGCCTC
TCATGCTAACCCGTACGCTCGTAAAGAACAATTCGCCGATAAGAAGGTCC
AGTTCTTCCGTAGCCACAGTTCAACACAAGAGCTTACACTTGTTATTTCG
GCGACACGTCATGGTACACTGGCTGACGTCAGGGACGACGTATGTGAGAC
GTTTTTTCGACGTGGTATTTTCTTGGGTGAAGAACGGTATATCCATACAG
CTCACGGGAACATTTTAAAGAACATCTATGAATTCGAGCATGGcgggaaa
tatttttttggaccAGCACACATCTTTGATATGAACGAATATGATCAATT
CAGTAAAACTAACAGCCCTGCTCAAAGTGCTTCTGGAAGTAACAAAGGTA
GCGCTAGTAAAGGTGTTCTTTCAGAAGATAGCCTTAAGAGTAATGGTGGT
CGCAGCTCTGTCAGTGGAGTGAACGAGTCATCAAAATCTCAGAACGGGGG
TCCAAGTTCCAAGAGTGGAGGAGCCAGTTTCCAGAACGGTGGTCCAAGCT
CAATGAATGGAGGGTCCCGTCTCAAAAATGGAGGGGCCAGTTCCCTTAAT
AAAAGTCAGAACGGTTCAGCTCCAAGCCAAGGCGAATCAAAGCAATCATA
CGCCCAAAGCGGTAGTGGGCGTACCAATAAAATCAGCTCTCGACTCTCTA
ACCTCACAATAAATGATGTGCGCTCTAACCGCTCAAATAGCCAAACGAGT
GGATCTGGTGGTCCAACGGGCGTGTCACGGGTGTCTCAACGACGTCGCTG
TAATATCAAAATCACAGTAGACCATAACCCGGAAACCTTATGCTCGTTTA
CTGTGGATGAATCGAGACATCGTAATATTGCACAATTGATGTCAGATCTT
TCATTCCAATTACATCTGAGAACTAATCAAATCACAAAGATTTTCACCAT
GTCTGGGAGACTGatcaATCGTGTCGATGAACTGTTCCTAGGCGACCATT
TCAATGCGATGACGTCATCTTTCACTGGCAATGGTTATGGTCACATACCT
TATGCGCATGTACGAGATCCTATCAACAGATATACCGATTACCATAATCC
GTACCAAGTCACCGTGGAAGCAGCAGGAACGTCACACGTTTTCGAACTTC
CGTCACAAGAATACGATCAAATTTATAGACGGGGTGCCGAGCTTTACAAC
GATCTACAATTGGATTGGGTTTACGGCTACAATGGTCGAAATTGTCGTAA
TAATATCGTGTTGTTACCAAGTGAAGAACTGTTGTATTTCGTTGCTAAGG
TTGTTGTCATTTTCAACGATCAACAACAGACACAACGATTCTACGCAGAG
CACACAGATGAAATCCGATCAATTGCTCAACATCCTTCAAACTTATGGCA
AATCGCCACTGGTCAAGTATCGGGAGGTGATAGCGGGGATATGGCACATG
TCCGTATTTGGGATTCCAAAATCTTGCACACTCTCAATGTATTGGAATTT
GACTCGATGAATTTGTCTGTGGAATGCCTTGATTTCTGCAGTAGCAATAA
CGGTGAACGCTTAGCAACGGTTGCTAACGGTAACGGAGAATGGTATCTAA
CCGTTTGGGACTGGGAAGAAGGGATTAAACTCTCACACAGTGAACCTTAC
GAAGACCATTATGCTGAACTCGACATCCAATTCGATCCGTTCGATAGCAC
ATCCGTCGTCACCTGCGGTAAAGAGCACGTCTTCTTTTGGGACGTCTCTC
AACCAGACGCCGTCTACCGTGTCGGGTTTTTCGAGGATTACTCGACGCCC
GAATACGTAACGTGCTGCAGTTTCAACCACGACGGACGTCTCATTACTGG
TGACTCAAATGGTTACATCCACGTTTGGGATACGCATTTGAAGCGTACCC
TATCAACCGTACCAACAAACCATACTGGTAGTATCATTACCTTACGCGTG
CTCTCTGATTTCCATGTTGTCACTGGCGGCGGAGCCGACCGTAAACTCAC
CCTTGTCAGTCTTATTGACAGCGTACCAACTAAAGCAGAGTTTGAACTAC
CGGAGCACGTGGGCGGTGTGGTTTCCATTGTGCCGCTTTTCGGTGGGTTC
AGCGGTGGCgataaagattttgatttcttgaGATTAGTTGTTGGTACAAG
TTGTAATTCTATCTTGGCAGGTTCGATGACTGAAGCTTTCGAATGTATTG
TGAAAGGTAT

Run BLAST on NCBI

transcript from alignment at sc0000001:2611662..2625905-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00000269 ID=TCONS_00000269|Name=TCONS_00000269|organism=Clytia hemisphaerica|type=transcript|length=14244bp|location=Sequence derived from alignment at sc0000001:2611662..2625905- (Clytia hemisphaerica)
AAAATAATAAATCGAGAGGGAATATCTCTTTAAATATTTTCATTTGGATG
CATGTTGTTATAGCTTATGTTTTGACCGTATGGAGGGTATACACATAACT
TTCTAGTGGTGTTAGTATGGAAATTCTATGAAAATCAAGCTTCTAAATTT
CATTATTTTGAAGTAGAGACGGAACTCTTTTTAATTTGTATCAGTTGGAA
ATTTTTTCGCAAAGACAAGAAATTCAAAAAAAGTTATTTAAGTTGACATA
AACAAAAAAACATTATGGTTCTTAAGTCAAAGAAAGGTGCAACGACAGTC
ACAAAAAACGGACGTAAATTAACTAAATCACGTAAAAAGGAGAGCACATT
AGAACCCAGTGCCCCACCTAAAGAAGAAGTTGTGGATGATGAAGAAAAAG
TTGTTCTACCGCCACTCTCTAATAACAGCAACGACTTAGTTGGTACAAAT
CGAGGGTCCGCAGACCGCGATAGTCTCTTAGACGAGGAGAATTTTACACC
TAGGAGTATGGAAATTGAAGGGCAGGGCGGCGCTGGGAAGCCGGCGCGAA
GTTATGAAGAGGCGCTCTCGAGTGACAGGCGTGCTGATGAGGGAATGAAT
TCACCGCCACCCAGTGGCGTGTTGAATAAAGTAAGTTTTGATGATCTTGA
TCAAGATTGGGCCCATTCCACTTTTTTGCAAAATAAAAGTTTTTTTCTTT
GCGCCTCCTTAGACTTAGGCGATGCTATCGTCCGTTTAAAGGTCAGTAAA
CGCGGGAAAGAGTTAAGGCGTCAGGGCGGTTTACGGGAAAAAAAGTGGCG
GTAGAGTTTTGTAACAAACACTGTAAACATCTCTGCCATTGCTTACTCCA
CCCAAATTTATCACGTCTCTCCTAAACTATTCCCTTTTTTAGTGATCTTG
TGTAGACGATAGGATCGTCTACCTTAGACTCTATATTTATTCCTCCCCCC
CCCAACTTTCAAATTCAAGGCGTGGGCCCCATGAGTTTAGAGTTCTTTTA
TCTCAAGGGACGATGATTTGTTTTCCATTCTGAAAATTTTAACTACCAAA
ACTAAACATATACATCCTGAACTTTTTTATAGTTCTTAAGCTTAACTTTA
AGGTTTGTATGATCAAATTGGAAAGTTTGTAAGAAATGTCTATGAATGTC
AGTGTACACGTTTTTTTATAAGAACTTCTATATAAGAACATAAGGCTTTG
ATAGCCACCATATTTCTTAGGAAAATGGTCACAAAATGGTCAAAATAAGA
TCATGTTAAGAATATTTTCAGGCTTGAAACTGAGAAAGTTAAGAACATCC
GAAGGTTTAAGAAATTTTGGATGTTCTAATAAAATAAACGTGTATAGAAA
GAGTTCATATTATACTGTTTTTTTATCGACGTTGAATAAAATACAGTAGA
TCAAAATCAGTAATGAGATGACAGGGGTCGTGGCTGATTTTTGGGGCGTG
GCAAGACAAGAGGGTTATTACTTAGACTGTGACAAATTCTTGGACTATAG
CATAATCTACCTCACAAGTATGGGTCAAGCCACTACGCTATTGATCAAAA
GTTTCACGAATTAATTGACAAAATTGAGCCGTACGAAAGGTTTTGACTTT
AGATTGTGACGATGTCTTGAATTCTGGAAGCATTCTTATGTTTTGGAATT
CGTATAGTACAGTACAGAAATCGACCATACTCGCTTAAAAGTCTTCTAGA
TAGTTTTTCGAGAGCTTTCAGATTCTATAATTGGTTTTGGCCTAAAATGA
GTTTAAAATTTCCATAAAAATTTAGCCCTTGGACTTAGCCTAGGTTTTCA
ATAAATGGGTCCAAAAATAAGGTCAACCCTTAAAATTTTTCTGGGCCGCC
CTTCTAATATCGATCCATAGGATATTAGGCATGTCTGGTCCAAATTTGGT
GCTTTGTTCCAAAGTTGCACGATAAATACACCAATCAGGCCTACTAAGTT
TATCTATTGGACTTTTATATTTGTTTTTAAACCTTTTTGGATTTTTTGAA
TAACTCTAATTAGATTTGACTGCGAACTCGGTTTAAACAGTTGAAATCTT
TTTTCTTTCTTTCTAGGGTATTCTCACCCGCAGAAATATAAACGACCGTA
CATACGACCGTACATACGACCGATTCACCGATCCCTTTTACGCGAAAGCG
CCACGCCGTAATTTGAGCCGTCTTTCAAACATATCTTACGAACGTGGCTA
CCCGGATGCAGCTACGTACAACGGGCGTTACGCCTCTCATGCTAACCCGT
ACGCTCGTAAAGAACAATTCGCCGATAAGAAGGTCCAGTTCTTCCGTAGC
CACAGTTCAACACAAGAGCTTACACTTGTTATTTCGGCGACACGTCATGG
TACACTGGCTGACGTCAGGGACGACGTATGTGAGACGTTTTTTCGACGTG
GTATTTTCTTGGGTGAAGAACGGTATATCCATACAGCTCACGGTACGTTT
TTAATTTCAAGAGATAATCAAATAGTTTGAGATACATGACTTGTAGATTC
CTTTTCAGGGTCGGATACAGGAGGTAGGCTATCTTATTCATGGAGAGTAA
TTAGTTTCCATATAAGGTAATACGATAATAAAGTACACTCTCCTCCATTG
GTTATAGCCTCCCTCTGTATCCGAGCCTGCTTCTAAAAGGAAAGCAAAAC
TTTCAAATCTTTTTTGCTCAACTCTTATCCAAAGTCGAGATATCAAGTTG
CAAGTTTTATGACTCCTAGCTATAAAACAACAGAATTTCAATGTAAAAAC
CGTGTCAAAACCCATTTTTCGAGATAAAGAATTATCACAACTCAACTTTA
AAGAAAAGAGTTGAAGGCCTCTGGCCGATGGATGAATTTACTGGCAAAAG
ATCTCAAAACTATCTGAATATCTCCTTAATACTAGACGATGTTGATCGGA
CAGAATCGAACCATAAGATCGATTGAACCAAATCGATTACCTAAAACTCG
ATTGTCAAATGCAAGCCGAAACTTTCTGATTCGATTTGATCGGTCGAACT
AATTGAATTTTATCGAGAGTTTTTTCACCGTTCGATCTAGTTCGATTGAT
GATGATTGAATTTCCATTCGAATTTTAATTTTAAATTAAAAACCATCATT
TTAACTAGAATCTTCTTGCATCGGAGACCTTACAAGCTCTTCTAATTCTA
TAATATCTGCCAAAAGAAATGGAATTGTGCTACTTCTGTCAGCCTCCCCA
ATATTTTCCCCCTTCGTCGGGGAAAATTTTCGTCGGGGAAAAATATTCGT
CACTTGCTGGTAGTTGGTAAACGCATTAAGGCCGGGGAAAAATTTCGTCG
GGGAAACGACGAGGAAACGAAGTTTTCCCCGATAAGGTAACAAACAAAAT
AAGATCATAAGGCTGCCATGGTCAAAATACTAAGATCAAGTCAAGAACAT
TTTTAGGCTTTGCGGACTCTGGAACACCTGACTTTAGGAAAATGAACAAT
GAAAATAAGAACATATCAAAGGAAGAACATTTTTAGGGTTAAAATTAAAA
AAGTTATGAACATCCGTAGGCTTTAAAATACTGGACGCTCTTGCTTAAAA
GAAATATGTATCCCATTCCTCAAGAGAATTTTCATTTGAATTAAGTGTTT
AATTCCATGGGAAAATGAATATAATAAAATGGATTGTTGATTTTAATATG
CTTATGAAAGTTGCTAGCCTCGTTCAAAACTTCCACCTTTTTTAGTCGAT
TTCAGGTAATTAATTCTTTTTGGTCCCGGTTGGGGATAATAGGCTAGGCG
AGATGACGGGTATGTCCGAGCCAAAGTTCGAAAATCGACCCTTAGGGACT
GAATTTCGAAAATACTGTCCATGTTTTGACGTTTTTGCCACCCTTAGAGA
GACCATTTCCCCAAAATCTTTTTGTACCCCTTTGGGGGACTTTCGAGAGA
GTGAAAAGGGGCCCTTATGGCTCCCCCATCCCCGGCCCCCCCCCCCCCCC
CGGGGGGGGGGGGAAAAAAAAATTTTTAAAAAAAAAAAAATTTTTTTTTT
TTTAAAAATTTTTTTTTCCCCCCCCCCCCGGGGGGGGGGGGAAAAAAAAA
TTTTTAAAAAAAAAAAAATTTTTTTTTTTTTAAAAATTTTTTTTTCCCCC
CCCCCCCGGGGGTTATTCGTACAAGAGATTTCGTAAGTAAGTGATAGCTT
TTTGATGTCGAGTTTTTCGATTAAATTTTACAGTGTTTTGGAGAAAAAAA
TGAATATACTATTTCATAAAAATCTCATATTATCATACTGATTTACGCTC
TCTTTTTAAGAAAAACAATTTCATAAGAACAATGAGGCTCAAAAATTCTA
AAAAAATGAGATGCCTGCTTGCGATTGCTTAATTTCAAGCAATTTAACAT
TAATAAGAATCAGGTATGAAGCCTAAAATTAGAACTAGATTAATTTGAGG
CAAGCTTAAAGTTCCAAAAAAATAAGAACAGCCGAGCCTCGACAAAAAGT
TTACTGATTCTTATAACAAAGAGCAGAGTAAGTAACTTTAGAAAATCTTT
NCGAGCCTCGAGAAGAGTTTACTGGTTCTTATAACAAAGAGCAGAGTACG
TAACTTTAGAAAATCTTCAAATATAACATGCAATACTGTATTTAACAAAC
AGTAAAATGATACTATCCTCTTTAATATCATGATTAAGAAATCAAATCTC
TAAAGTTTTGTATTTCTTTGACAATCTTTAAGATTATTTTTCTGACATTT
CAATACTGCCATTCACTTTGTTGTGTTTATCTCGTGTACAAAACAAATAA
AAACTGGTTGCCATGGAGATTACAGAAATCACGCTTAACGTAATAACAAC
GTATAACAGTATTTCCGTATTACCGCACGACGTCGACTTCAAAGGTTCTT
TTCGTGCCTTTCCACCAACCCAAGCATCAAAACTCCCATCTTCCATTTCA
AACGAATTGCATTGTGGTAATGATTTGGGTGGCTGTTGCATGTCGGGAAA
TGATTCATTAAATACCAACATCATGCCTTCTGTTATATGAAACATGGTGT
GACAATGCATCAACCAAAACCCAGGGTTATCACTGCGAAACCGGACCACA
ACGTATCCGGATGAAGGGACAATTACCGTATCCTTTACCGGTGGTTGATC
AAAATTCAATCGTTGGGTCATATCATCTTTCCAGTGTTGTCGGCTACATG
GTTTATTATCACAAATTATATCTTGATTTAAGTCGGCTATAAGATTCGTC
TGGTTGTCCATTACACCAAAACCTTGTTTCAAAACATGGAAACTGTGACC
GTGTAAATGCACCGGGTGATGTCCCATACTGGTGTAATTTTTGCCAGGAT
CATTCGTAGTCGTGTAGGACATTAAGATCAATTGGATGATTTTGTTTTTG
GGAAGTTGGAGAACATTTGTACATCTGCAACCGTCATCAAAGCATTCTTC
AACACATGGTGTAAGTTCAGTTCGGGAATCATAAACCGGTGATGATTTTG
GGAAAATAAATCGATGCATGTTGATACTTGAACCGGTAGCGAAAGCAAAA
TTCAGGAATAATTCATGAATATCTGCGGTTGGGGATAGGATCTCTTCGTC
GGTGTTTTGTTCATCATTGCTGAGGTTGTCGCCATCTGATCTAAGTTGAT
CCACAGTGATACATTCAGTGTGCGGGTACTCTTTTGCTGGGTAGGCTCTC
CAGGGGCAGTTCAGTACGCGACAGGGTTCTGCTGAAGTGCAGTTTCGAGG
AAGGCTTGTTGGGTCTGTTCGGTTATTAGCACCTTCGTAATGAAACACTG
CAAACACTTGAGCTTTTGGTATCATTTTATCCTCTTTTCGAACAAATGGT
CCTTGATAGAAAAAATAATTTCAATATGATTTTTATGTATACAATTTACT
CTCGCTTATTAGCACTCGAATGGAGAATTTTATTTGTTCGAATTACAAAA
AGATTCGAATTAGAATTAAACTTCCATTTTGGAGTCTTTCGTATGACTCG
GCAAGGGATTGAACCCACGACGTTGTGCTGCACTGTAGCCGAAGGCTCTG
TCTTAAATTCTTGATATTCGTGACGCAATCTTTTTACGGAAACAACAAAA
AAAACACCGGAAGTTTGCCACCAGTTTTGAATTTAAACAATGAAACTGAT
GGTAAACGCCCGATGTTTTTTCGGGTGTTTCCGTATAAAAGATTACGTCA
TGAGTATCAAGAATACACTACGGTTCTTATAACAGGACACTCAGAAAATT
TAAAACAAAACTTGTTTCTCACCTTCACCGTCTTTCAGTGTTTCTGCTCT
GATCCAATATGATTGTATAGGTTGGTCAGCCTCCACCTCAATTACGTATG
TTTCACCACCAAAGATGATAAGAGACTGGAGTCCAACTGGTTGCACAGGG
AAACCATCTGACTCAATAACGGTNATAAGAGACTGGAGTCGAACTGGTTG
CACAGGGAAACCATCTGACTCAATAACGGTCAATGAATGTTGATCAATAC
TGATGCGATATGCGTATTCACTCAAAGCTCCTACGATATGAAATCGTATT
GTCTGTCCTTTGGTCACATGGAAATAACTCAAGGGTGCTTGGTTATTATC
ATACCGCCCACGCCCGTTGATCAGGCCGGAGACGTAGGTTAATGAGCTTA
ACTTCACGCCATCAAAACTGTTGTCTTTGTCTAGATTATGTGAGTGGAAG
ACTCCGGATCCCTTGTCGAACGTCGCGTACGGATTCAACGTTTCTAGTTC
CGTTGAGGTTACGTGGTACCAATCAGATATTACGAAAATAGAGTATGGTA
CGACGGGTGGTTTCCGGTGGATGATGACTCCGCCGTATACACCGTCCGCT
TTTTGATTTGACGTGTGAGAATGATACCAATGAGTTCCGGCCGGGTTCGC
GTAGAACCGGTATGTGAAGCTTTGTCCGGGGCTGATCGGACATTGAGTTA
TATACGGGACGCCGTCACTATACATGGTTGACCTTTGATGCATGCCATGC
CAGTGGATTGATAAGGATTGCTTTTGTAAGTTATTTACGACTTTCACAAC
AACTTGTGCCCCTTCCATGACTTCGATGGTGGGACCTTTGTAACGACCAT
TAATCATAATGAGAGTTCGTGGAACACCATCTAAAGGATTGGAATGTTGT
GAAAGTTCTTCATGTGAAACATCGGGTACGGTTTTATGGTAATCGTTTGA
TTTTAAATGCAATCGTGAACCATTTAAGACTACATCGTATACGTCCTGCC
ATCCGGTTGCGTATTTAACAGCGTACATCATACTTCTCCCTTCACGGACC
ATAAACTCATATCTTTGATAAAAAAAAGAAGAAAAATAAACAGAACATAA
ACAGAAAACTTTCGGACAATTATATTTTGAAATTTTTTTTACCTGAAAAT
GGAGGGAAAGTCTTTCATTAAGAAAAATCTAGACTGAATTAAGAGAAAAT
TAAAATTGGCGGGAATATCTTTTGCCTTTAAAGTTTCCTGTATTAAATTA
AGTTACCTGCATCTTTTCTCTTCGCACAATTCACCGTTCGTTAAACCCAA
TGTTAAAGTCAGAAATACAAAGATGTGTATTGCAAACGCCATGACTTTCA
TATGATGTATCAAAGGGAGTGTTTCTACGCCGATCATTTATAGAAGAGAT
TTTAGATAATCTCTCATTAAATAACGCGTTTTTTGTTTAAATAACACACT
GACTTTTCGAAAGATTTTTGAAAGATCGAGTTTCCATAAGATTCATTACA
CTACACGCTTTTTTTATATAAGAATACACTTTATAAGAATGTCCATGAAA
TGGCCAAAAAATTAAGAATATGGTAAGAATATCACCATCATGGAATTTAG
CAACTGAACCTAAGAATGCCATTTTTAATGCATTTTAACCTGTAGATTGC
CAATTTCAATCTTAACCTAAGAATACCGTAAGAATATTTTTGGATGATTT
TCGCCAAAATCTTAAGAATATCCATGATGAAATGAAAAAACACCATTCTT
ATAAAAAAAAGAATACCGTAAGAATATTTTTGGATGATTTTCGCCAAAAT
CTTAAGAATATCCATGATGAAATGAAAAAACACCATTCTTATAAAAAAAA
GAATACCGTAAGAATATTTTTGGATGATTTTCGCCAAAATCTTAAGAATA
TCCATGATGAAATGAAAAAACACCATTCTTATAAAAAAAAAAGCGTGTAT
AAGAAACTGCAATACGATACAGAAAGGATGACAGCCTCACCTATCTCCAA
ATCTCTAAACAACGAAGATAAAAAGCCTTCATTTTGATTTCAAGATTTGA
TTTTTATGTTTATTTATTCGGTACAGTCAGTCCGAATAAAAAAAGTGTAA
ACCAGTTTCATACTTCATGACCAAAATAAACGGAAATGATAAATGGAAGA
TTGTTTCATAAGAAAATGATGAATTGGTGACAAATATATTATATCAAAGA
GGATGTTTACACATTTGATATATTCCTCAAGGAAGGACATTCTATATGGT
AATTGAACCACAAAAAAGGGACAAGATAAGAAAGAGGCGTAGCCTATACA
ATAGACAGCTCCTCCAGGCTTTTAGGCTTTACTCTCGGGTAGGAATTTTA
CGCTCAAAACGAAGGAAGATATGGGGTCAAGCTGAGAGTTTTTACAAGTT
CTTTGATGACTCTGTTGGTCGTTAAATGTTGAGACAAACGATTTTATTAC
TTTTTCTAAAGAACGCGTCATCCCTATTGTTTAAAAATAACCAATCAGTT
AAGCATCTTGTAAAAACTCCAAGGCATCCCAATATATAACGTAGCCTAAA
AGAGGCTTTATTTTTGCAAAAACTCAAATGAAAAACAAATAAGAATATAT
AAGAACATTTTAAGATTTAAGAATATTTTAAGTCTTGAAATCATGAGAAA
TAAGAACAGCAGATTCTCAGCCTACATTTGACGTTTGAAACGAACCATGC
CAGCTGGCACACAACGTTGTTTCAACGTTTATTTAACGTTCACAACGTCC
ATATAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAGCTGGGATAT
AGGTTAGAAGATCGTTATCGGAGTACGTAGTCCTAATAACCCATACACCC
CTGTGTCACAGACCCGCTGGAACCCCAGCCCCACTGGAAAATTTGGCAAA
CATTTCCTCCTCGGTGGGAAAATATACCCTGGAATTTCAGCCCCACTGGG
AATTCGAGATCCAAGTTTTTAAAATTTGCATACCAAAACCATCCCCACTG
GATTTTTTAACCTTGGAACCATAAAGTTTCTATCCCATTGAGATTTAAAT
AGGAATTTTTATCCCCATTTAATTGCATTATGCATTTCTTTGTGGAGTCC
GTATAGAGCTAAACCCGAATCTTTTAACACTTTCACAGGAAAGCAAAAAA
ATGTGACTTGCCTAGTCAAGACATGCACCACATTTTCATGATCTAGTTCA
TTCTTTGTTTTCGGGAATTGCGTTTCTCTTAATCTGACCGCCACGTTAAA
ACCATGCTTATAAAGGTTTTTCGAGTTGACTAAATTACCTAACTTCCGCA
ATTATAAAAGTAAACGTTGAAATTTTCAGATTTTTGTAATCGTTAGAGAG
ACTTTTGAAGGTGTAAAAAAACCGACCCTTATCGTCCGCACATACCCCAG
CACTCATTTCGATTTCAAAGGGGCCAAGTCGCCTCTACAAATGTAAATGT
TTGCTCCTCCATTCAGGTAAGTTTTCAATTAGGTATATAAATATATTCTT
TCGTTTTTCCAGGGAACATTTTAAAGAACATCTATGAATTCGAGCATGGC
GGGAAATATTTTTTTGGACCAGCACACATCTTTGATATGAACGAATATGA
TCAATTCAGTAAAACTAACAGCCCTGCTCAAAGTGCTTCTGGAAGTAACA
AAGGTTTGTTCTTTTTCCTCCGTATAAGCCAGAGTAATTAAGTTGAAGCT
CCATTAGCGCGGTGTCAGAGGAGATAGAAGGGAGACGCTCCTCTGATTTT
TTTACATCCTAAAATCAGCAATTATTGTGCTTTGACTTCCCAGCTTATTC
CAGTTTTTGTTGTACCCCCATGATACTGGTGACTTACAGTACTTACAGTA
GTTTCATTGCCCATTAGCTTATGAACTTTTATTTACCTCAATTCTTGTTT
TCAATTGTTTCTGTAGTACTCCTTACCTCCCTAAGTATCAAATTTGTAAA
GAATACCACCTTTCTTCCCACAATTCAACTCTTACTTTTTTGTTCTGTAT
TACTTTTAGGTAGCGCTAGTAAAGGTGTTCTTTCAGAAGATAGCCTTAAG
AGTAATGGTGGTCGCAGCTCTGTCAGTGGAGTGAACGAGTCATCAAAATC
TCAGAACGGGGGTCCAAGTTCCAAGAGTGGAGGAGCCAGTTTCCAGAACG
GTGGTCCAAGCTCAATGAATGGAGGGTCCCGTCTCAAAAATGGAGGGGCC
AGTTCCCTTAATAAAAGTCAGAACGGTTCAGCTCCAAGCCAAGGCGAATC
AAAGCAATCATACGCCCAAAGCGGTAGTGGGCGTACCAATAAAATCAGCT
CTCGACTCTCTAACCTCACAATAAATGATGTGCGCTCTAACCGCTCAAAT
AGCCAAACGAGTGGATCTGGTGGTCCAACGGGCGTGTCACGGGTGTCTCA
ACGACGTCGCTGTAATATCAAAATCACAGTAGACCATAACCCGGAAACCT
TATGCTCGTTTACTGTGGATGAATCGAGACATCGTAATATTGCACAATTG
ATGTCAGATCTTTCATTCCAATTACATCTGAGAACTAATCAAATCACAAA
GATTTTCACCATGTCTGGGAGACTGGTAAGTTTGGTTTGGAGCCTTACTA
ACCAGTCCCCCAACCTCGTCCCCGTGTATCCCAGGCTTTATTTACGTTAC
TGATGGACGTCAGAGAATTATCTGGCGCTCTCAGTAAGCATCAAAAAGCC
GATAATACGTAGGGAACGAAGATTCCAGTCCCCTTATTTATGATATGCCT
CAATGTAGAGTCTTATAAGAATTTTCCCAAGATTTTTAACCTTCAATTTA
TTGAAGTGAGAGGTTGTTGAAGAAAATTTCTAGTAATTTAAGACATTATT
ACAAATCAATATTAACACTCCTGATAATTGGTGCNTTACAACTTATCAAG
TTTTAATTGCTAGCAAACTCGTAAAAAAGTTTGATAACCTAACGAGGAGT
GTTTTCTATGAGTTCTTAATCCACCTATTCTAATCCGTTGGTGCAAACCA
CCAAAAGTTCTTTTTAGGACTATTTTAACACTAACCATTTTTCAACGTTA
ATCTGCAGAAAAATCAAAGATGGTGTAGCTTTGGGTACTAGTTAGAGTTA
AGAGATGTGGACTGAACTTTATAACTTCAGACTTACGATTCAATCTTGTC
ATTAAAAGGGAACTCGAGAAAACTTTTCATTTTCATTTTTCAGACCTCGC
AACTTTTCTGTATGTTTTATGATGATTTTTCATAATTTCCACAAAATTAA
AACTAAAATTTTATTTTTATTTTTTTCAGATCAATCGTGTCGATGAACTG
TTCCTAGGCGACCATTTCAATGCGATGACGTCATCTTTCACTGGCAATGG
TTATGGTCACATACCTTATGCGCATGTACGAGATCCTATCAACAGATATA
CCGATTGTAAGTAGAACATTTTCGCGTTTTTTTTGAAAAACTATAATCCT
TCTGATGAGTATAAACCAGGGGAAGAAGTTCTATTGGTTACATTCAAGTG
TTACGTCACTTCTAACCAATAGAATGGCTTCATTCCGTTTTTTAAAAAGA
TAACTTCAGATCTAAAAAAACAGAATTTTATTTTCGGTTATTAGGAATTA
GGCACAAATGTCATTCAGGTTTTAAGGTTTATGTTTAGTGAAAACCCACA
CTGGGCGAAATAAGAGATTTCCAATCCTGGAAATATCTTGAAAATATGAT
TTTTCCATATACTTTTGTAAATATGGAAATATGACTGTTCTATATTTCCA
AAGTTGTGGAAATATCATATTTCATGATATTTCCATTTCTGAAATTCATT
GAAACATCATATTTTCAAGATATTTCCAATTTTTGGAAATATCATATTTC
ATGATATTTCCATTTCTGAAATTCATTGAAACATCATATTTTCAAGATAT
TTCCAATTTTTGGAAATATCATATTTCCAAAAGTTGGAAATATTTTGAAA
ATATGATATTTCAGTTTTGGAAATATCATGAAATATGGTATTTCCACAAT
TTTGGAAATATAGAAAGGTCATATTTCCATATTTACAAAAGTATATGGAA
ATATTATATTTTCAGGATATTTCCAGGAATGGAAATCTCTTATTTCGCCC
AGTGCCATGACAGCAATTTGCGTTGATGCATTTATTTAACTCGTTCTAAG
GAAATCTAGATAGTAGGGTAGTTCTAGAAAGACACTTCCACTGCAAAGCA
ATTTTTTAAAGGTCTTGGGGAAAAGTTTTATTTTGGAGACTTTTGAGCTA
AAAAGGTTTGAGTATAGTTTTTTAAAGAGAAAATTAAATTTTACGATCGA
TTATTATTTTCAGACCATAATCCGTACCAAGTCACCGTGGAAGCAGCAGG
AACGTCACACGTTTTCGAACTTCCGTCACAAGAATACGATCAAATTTATA
GACGGGGTGCCGAGCTTTACAACGATCTACAATTGGATTGGGTTTACGGC
TACAATGGTCGAAATTGTCGTAATAATATCGTGTTGTTACCAAGTGAAGA
ACTGTTGTATTTCGTTGCTAAGGTAAAGTTTACCCTCTCTTCATGAGTGA
CACTGTCAAAATTAGGAATATAGTATTGTCCTTGTTTTGTACGCTGTTCC
AATGAAGTCAATGAAATATTGGATTCTAAGCAAAATTAGTAAGTAAGAGC
ATCATGCAGAGAGGCATCAAGTACTATTTTTTGGGAATCTTTGGTATGAC
CCGGCTGACCACAACCTTGCACACCGTAGCTGGATGCTCTACCTTCATGC
TACGATCGCTAAACTAGTCGTTGCCCGTGGTAAATTGTTAAATACCAGAA
TTAACAGAATTTAATTTTGTAGCCATATCTACATGAAAGTAAGCCCCAAT
TGATGGTATGTAAAACATTTATTCTTCCAACTCTAGGTTGTTGTCATTTT
CAACGATCAACAACAGACACAACGATTCTACGCAGAGCACACAGATGAAA
TCCGATCAATTGCTCAACATCCTTCAAACTTATGGCAAATCGCCACTGGT
CAAGTATCGGGAGGTGATAGCGGGGATATGGCACATGTCCGTATTTGGGA
TTCCAAAATCTTGCACACTCTCAATGTATTGGAATTTGACTCGATGAATT
TGTCTGTGGAATGCCTTGATTTCTGCAGTGTAAGTGTAGTTTTAAGTGAA
ATCTTCTTTACACTGTTTTCGGTAGTTCTGTCGCTATACCTATTCTTCAA
AAAAGCCCATGTTAAAAAAAACCGTTGTACAAAAGAAATCGAAAATAGTT
TCTTGTTAGCTTGTGCACGAGTTGTGCTTATTCTTATTTATATTATAACG
TGACAGCTTTATTTGAGGCCATACTGTAGAATCTAATTTTATCGTATTCC
CATTGCATCGTATTTGTAATTTTCAGAGCAATAACGGTGAACGCTTAGCA
ACGGTTGCTAACGGTAACGGAGAATGGTATCTAACCGTTTGGGACTGGGA
AGAAGGGATTAAACTCTCACACAGTGAACCTTACGAAGACCATTATGCTG
AACTCGACATCCAATTCGATCCGTTCGATAGCACATCCGTCGTCACCTGC
GGTAAAGAGCACGTCTTCTTTTGGGACGTCTCTCAACCAGACGCCGTCTA
CCGTGTCGGGTTTTTCGAGGATTACTCGACGCCCGAATACGTAACGTGCT
GCAGTTTCAACCACGACGGACGTCTCATTACTGGTGACTCAAATGGTTAC
ATCCACGTTTGGGATACGCATTTGAAGCGTACCCTATCAACCGTACCAAC
AAACCATACTGGTAGTATCATTACCTTACGCGTGCTCTCTGATTTCCATG
TTGTCACTGGCGGCGGAGCCGACCGTAAACTCACCCTTGTCAGTCTTATT
GACAGCGTACCAACTAAAGCAGAGTTTGAACTACCGGAGCACGTGGGCGG
TGTGGTTTCCATTGTGCCGCTTTTCGGTGGGTTCAGCGGTGGCGATAAAG
ATTTTGATTTCTTGAGATTAGTTGTTGGTACAAGTTGTAATTCTATCTTG
GCAGGTTCGATGACTGAAGCTTTCGAATGTATTGTGAAAGGTAT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000145	XLOC_000145	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000001	supercontig	sc0000001:2611662..2625905 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0782243	0.0553871	0.0519051	0.182238	0	0	0	0	1.62949	0.746244	1.11372	1.45267	19.6168	15.3949	6.59819	11.0078	3.98328	4.64231	36.9167	26.5333	15.6401	13.4557	3.3105	6.7139	7.42821	13.9231	2.07186	0.796687	0.0767545	0

Blast

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BLAST of TCONS_00000269 vs. Swiss-Prot (Human)
Match: EMAL1 (Echinoderm microtubule-associated protein-like 1 OS=Homo sapiens GN=EML1 PE=1 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 2.051e-61
Identity = 128/338 (37.87%), Postives = 191/338 (56.51%), Query Frame = 1

Query: 1954 LQLDWVYGYNGRNCRNNIVLLPSEELLYFVAKVVVIFNDQQQTQRFYAEHTDEIRSIAQHPSNLWQIATGQVSG--GDSGDMA-HVRIWDSKILHTLNVLEFDSMNLSVECLDFCSSNNGERLATVANGNGEWYLTVWDWEEGIKLSHSEPYEDHYAELDIQFDPFDSTSVVTCGKEHVFFWDVSQPDAVYRVGFFEDYSTPEYVTCCSFNHDGRLITGDSNGYIHVWDTHLKRTLSTVPTNHTGSIITLRVLSDFHVVTGGGADRKLTLVSLIDSVPTKAEFELPEHVGGVVSIVPLXXXXXXXXXXXXXLRLVVGTSCNSILAGSMTEAFECIVKG 2958
            L+L+WVYGY GR+CRNN+ LLP+ E +YF+A VVV++N ++Q QR YA H D+++ +A HP  +  IATGQV+G   D   +  HVRIWDS  L+TL+V+     + +V C+ F  SN G  L  V + N +  L+VWDW++  KL+  +   +  A     F P D+  +VTCGK H++FW +       + G FE    P++V C +F+ +G  ITGDS+G I VW     R    V   H G I  L +L D  +V+GGG DRK  L+S   +     + E+PE  G + ++    G             +++GT+ N +L G+++  F  I +G
Sbjct:  221 LKLEWVYGYRGRDCRNNLYLLPTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRI-TIATGQVAGTSKDGKQLPPHVRIWDSVTLNTLHVIGIGFFDRAVTCIAFSKSNGGTNLCAVDDSN-DHVLSVWDWQKEEKLADVKCSNE--AVFAADFHPTDTNIIVTCGKSHLYFWTLEGSSLNKKQGLFEKQEKPKFVLCVTFSENGDTITGDSSGNILVWGKGTNRISYAVQGAHEGGIFALCMLRDGTLVSGGGKDRK--LISWSGNYQKLRKTEIPEQFGPIRTVAEGKGDV-----------ILIGTTRNFVLQGTLSGDFTPITQG 541

The following BLAST results are available for this feature:

BLAST of TCONS_00000269 vs. Swiss-Prot (Human)

BLAST of TCONS_00000269 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
EMAL1	2.051e-61	37.87	Echinoderm microtubule-associated protein-like 1 O...	[more]

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TCONS_00000269 (transcript) - C. hemisphaerica

ZOOM

x 1

POSITION

0