TCONS_00002877 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002877
Unique NameTCONS_00002877
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2857

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002877 ID=TCONS_00002877|Name=TCONS_00002877|organism=Clytia hemisphaerica|type=transcript|length=2857bp
ACATTTTCGTGACTAAGTTCAGGCTAGCAAAATCGACCCCTAAAAGACCC
CCTGTAAAACCTGAAAACCACCGATTAAGCCCGTAAACCATCTGGTTTCA
TAAATACTATATGTTAAGGCACCAAAAAATCAATATGGCGTATTTTCTAC
CAAAAGGTGGCGCGATGCTAAGTCATTGCTTGGTCTAATAGACTAGTAGC
TGATTTTAAATCTTTAGGCTTGAACTGAGAGAATTAACAAACAGGAGGCT
TATTGTATGTAGTGTTCgaaaaaaactcaatttctcGGCCAAAGTTACGT
AGGGGAATGTTAATGAACTGCGACAGTGACCCGACGACCAGAAAACAGCC
CTATCGAAATAAGTAAAGACAAGAGGTTTTCCATACATAATGTCCTTACa
aattatttcttttgattgttttttgaaactcgtagatcataaataaattt
tgtcttCTTTTCCCTTTGCAGACGTCACCGTCCTATGATCTGTCAATTGT
ACCGTTTGAACACTGATACAGATGTTGAAAGCTCATCGGAAGTCGaagga
aaaacaaaatacaatccTTCGTTTGAGGGCAAGTAGTTAAGCTCCGCCCA
GTCAAGTCGAGCTACCAATATTCAAGTATCCTATCTCCTCCACATCAGAT
CCACCCTGACCACCCGCTAGGTAACTTCCGGGACATACCATCTTGGAAGC
GAATCGGATCCAGCTTTCCTTCAAATCCACCGAAAAACAGCAGCCGACCT
CCCTCTCATCACTTGGCATTATGTTTTGATCTCATCTTTCATTCGAAACT
TTAAAGAACGCTAATGGTGAAAGTGGAGCTACAAATGGTACTCAAAGACG
TGTATATTTTCAATGTCTTATCACCAATGACTTACACCGATTTGAGATAC
AATCATAGACGTTTCGAATGTTTCCGAATTCATCAATAATGAATTCCAAT
GGAAAGCCTTGATCAGAAAGTATTAAAACGCGTTCACCATACATTGAGTT
AAAATCACAATCATGTTGACCAAAGCGCACCTGATGCTTTCAACGAATGG
CAGTCTTCAATTACACTTAACATCCGCTATCAAGAAATGTTTGGGAAACG
TTTCGAAACAGAATTTTAGTTGCGTCCAAAGAAATACCAGTACCCGGGAT
GATATTCTCAATGGGATGAATTTGGTGACCATGGAAAAAGTTGTTGCAGC
GGTTTGCGAAAGACAACCTGACCAATAATACACTGACAGTCAAAGAGAAA
AGAAGATTATCCTTAACTATCTCTTGCTCAGCAGGTCAGGGGAATGAGAA
GACAGACCAGTACGAAATATTGCGAACAAGAGATAACGAGTCTGGTAGAT
TGACCGAAAGATTCTAATGTCAGACGAAACGAACTAAAAGCGTCGCAGCG
CCCTCTCCCAATCAACTGTTGTATATTTTGAGTAAATGAATATCTACGCT
CATGGTATCAAGCATGAAGTTTAGAGCCCGATGATTACATACGGCTGACG
GTATTTATCAGGGTGATGCAATACATAACTCCAAGCAATCGTCAAGCTGC
CATGTGGGAATGCTCTTCCTCGACCTTGGAATGATCTCTAACAGGATACG
AATTTGTGGCATGAGCATCCCCATTATTGTGGCTTCAACAACCTGGATTC
GATTGGTGGATGAAATTTGTGATAATGATGGAATTGTTTTGACATAGCTG
ATGGATGTTGTCTTCTCCGTAGATGCAGTTACTTGCTTGGTGATTGTTGC
GAACCATTGGTGTATTTATAAGAGTATTCAATACAATCGTTGAGATATGG
TATGATATGCTGATGGATGGATTATCTAGAAGTGATTTCTTTGGTTGAAA
GATGACCTCTTCTAGCCCAGTCATCAACCGTGGCCAATGTTGCTTGGCCA
ATGTTGCTTGGCCAGTGTTTCAAATCAGATCGTTCTATTTTTGGAATGAA
AAATCGTCATTTGAAGAGCGACTGTTAAATGAAGTTGTCTCGATATCAAT
TCTGTAATATTGGTTACCAATTCTTTAGTTCTTTTTGCCTATTGATTAAA
CTATTTTGATGGGTTAACTTATTCGAGTTCGAAATGAATAGTTTACCTTT
TCCTTCTAAACAATGATTTGTGTAGAATTTAAGCACCCCAAAGAAGCcta
cattttgattttgttgtggttTTAGTTTGTCCCAAGCTTTCAAACCTTAT
TTGTGTGAAAGGAGACATATTTTCAAAGAGTTTACTTTAATCATATTTCA
CAAATAGTGTTTTTACCAGTGTAAATAATTATTTGTGGCCTGAAAGGGAC
TTTTCTTAAAATCGAACTTCGTTTTGGACTTTTCACTGCCAGGAAATTCG
AGTTTCATTTTGTGATAGTATAACTAAATTCTAGATGAAGTTTTTCTTTG
TCAGAATCGATTTTCATCAGCGTTTTACAACTAAAGAGCATTTCatttat
atccatacatgggattggacgaacatttccagggtggtctccaaaaaaag
aaaattccggGGGGTCCCAGGTTACTTTACGCACTTTTTTCAGGGAGTTG
TTTTCCAAGGGGAATTTCTTTTGGGCATGAATAATTGGCTCGTTTATTTT
CTAATGTTCAAAGTTTTGGAATTTCCAGGAACCTGATTTGATTTTCCAGG
Gggggattcaaattattttaaaatttcaaaggggtaaaaaattgatttca
gttcGTCCTCTCTCAATGTCTTgtttaaaaaagggttttttgatGGACGA
TAGAATcctttttcccagatttttgcaaattttgccattatTTCAGGAAA
TATATGTACAATTTCATTAATTCTTTTGGCTTGAAAAGATTCGTGGTTCC
TGTATGG
Run BLAST on NCBI

transcript from alignment at sc0000023:510260..521592-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002877 ID=TCONS_00002877|Name=TCONS_00002877|organism=Clytia hemisphaerica|type=transcript|length=11333bp|location=Sequence derived from alignment at sc0000023:510260..521592- (Clytia hemisphaerica)
ACATTTTCGTGACTAAGTTCAGGCTAGCAAAATCGACCCCTAAAAGACCC
CCTGTAAAACCTGAAAACCACCGATTAAGCCCGTAAACCATCTGGTTTCA
TAAATACTATATGTTAAGGCACCAAAAAATCAATATGGCGTATTTTCTAC
CAAAAGGTGGCGCGATGCTAAGTCATTGCTTGGTCTAATAGACTAGTAGC
TGATTTTAAATCTTTAGGCTTGAACTGAGAGAATTAACAAACAGGAGGCT
TATTGTATGTAGTGTTCGAAAAAAACTCAATTTCTCGGCCAAAGTTACGT
AGGGGAATGTTAATGAACTGCGACAGTGACCCGACGACCAGAAAACAGCC
CTATCGAAATAAGTAAAGACAAGAGGTTTTCCATACATAATGTCCTTACA
AATTATTTCTTTTGATTGTTTTTTGAAACTCGTAGATCATAAATAAATTT
TGTCTTCTTTTCCCTTTGCAGACGTCACCGTCCTATGATCTGTCAATTGT
ACCGTTTGAACACTGATACAGATGTTGAAAGCTCATCGGAAGTCGAAGGA
AAAACAAAATACAATCCTTCGTTTGAGGGCAAGTAGTTAAGCTCCGCCCA
GTCAAGTCGAGCTACCAATATTCAAGTATCCTATCTCCTCCACATCAGAT
CCACCCTGACCACCCGCTAGGTAACTTCCGGGACATACCATCTTGGAAGC
GAATCGGATCCAGCTTTCCTTCAAATCCACCGAAAAACAGCAGCCGACCT
CCCTCTCATCACTTGGCATTATGTTTTGGTAAGTATTTGATATCAGCTTT
ATCCTGATTAGATGATTGGAGAAATCATTATCGATATCTGTACACCCCTG
TCTCAATGACCATTCGAACATTTCCCCTATCATTCTTACTTGGGGAAAGT
ATTTGGACTCGCTTGTCTAAGTGACACGATGAGAATTCCAATTCACCCTT
GTCTTGCGATCCACTGATTATTTCCGTACCGTATGTCCTGCTTCGATATC
AAATATTAAACAAAGAAATATCGTTAAAAAGCATAACTAAAAAGTACACT
ATGTAAATTTTCAGTGTATTTTCACTTTCATCTTTTATTCCCTTCAGATC
TCATCTTTCATTCGAAACTTTAAAGAACGCTAATGGTGAAAGTGGAGCTA
CAAATGGTACTCAAAGACGTGTATATTTTCAATGTCTTATCACCAATGAC
TTACACCGATTTGAGATACAATCATAGACGTTTCGAATGTTTCCGAGTAA
GTTTTTATTGTTAAAACCAGTACCGGTGTTTTTGTAAGGGGCCAACAAGG
TGTTGCATATTTCTTGTACGTAGATTTGACAAGCGTGGAGTGGCTTTTTT
CTGACTATTTCTAAATAAAGCATGACCAGACCTATTTCTTGGCATGCACT
CCTCCTTTTAAATTTTAAGCCTCCTACACACCCAATAACAAAAATTTGTT
AGCGTTGAAATTATTCCTCCCGTCTCAGGGATCTTTTAAGATATAATTCA
GAGAGATCAGGAGAGATAATTCCAGCTTTAGGCCTCAAAAGATTTTGACA
AAGTTACTTCTTAAACGAGACAGTAAGATTCACAGTGTCCTTTTCTATTT
CAGATTCATCAATAATGAATTCCAATGGAAAGCCTTGATCAGAAAGTATT
AAAACGCGTTCACCATACATTGAGTTAAAATCACAATCATGTTGACCAAA
GCGCACCTGATGCTTTCAACGAATGGCAGTCTTCAATTACACTTAACATC
CGCTATCAAGAAATGTTTGGGAAACGTTTCGAAACAGAATTTTAGTTGCG
TCCAAAGAAATACCAGGTAAATAAAACAGTTATAGACACCCCCTTCTCAC
AAACTTTTTCAGCCAGTGGTGGTAAAATTAATGGACTGAAACTCGAAGGG
GACTGATATTCCTATGTTTTTTTATGGAGTTTGAATAACATTATTTTTAA
GCCATAAAATTAAGTCGGGATGGAAAAAAATAGCATGATATTTTTGGGTC
AAGTTGGAGTTTTTACAAGATACTTACAAATCAGAGATGCTTAGAGCATT
GAACTTTTTCCTATCATATACAGTAGAATTGATTTATAAAATACACAACT
ATGCCAACACTCCCCAAAGTATCTACATTCTCAGCTCCCGTGGTGCCGAA
GTCCCGAGTTGAATAATGCCAACACTCGCCAAAGTATCTACATTCCCAGC
TCCAGTGGTGCCGAAGTCCCGAGTTGAATTATGCCAACACTCTCCAAAGT
ATCTACAACCCAAGGTCCCGAAGTTCCTAATTGAATTATGCCAACACTCT
CTAAAGTATCTACAACCCCAGGTCCCGTGGTCCTGAAGTCCTGAGTTGAA
TTATGCCAACACTCGCCAAAGTATCTACACTCCCAGGTCATCTACACTCC
CAGGTCCCGAAGTCCCGAGTTGAATTATGCCAACACTCTCCAAATAATCT
ATAACCCCAGGTGCCGAAGTCCCGAAGTCCCGAGTTGAATTATGCCAACA
CTCTCCAAAGTATCTACAACCCCAGGTCCCGTGGTCCTGAGTTGAATTAT
GTCAACACTCGCCAAAGTATCTACACTCCCGGTTCCCGAAGTCCCGAGTT
GAATTATGTCAACACTCTCCAAAGTATCTACAACCCCAGGTCCCGAGTTG
AATTATGCCACCACTCTCCAAATTTTCTACAACCCCAGGTCCCGTTGTCC
CGAAGTCCCGAGTTGAATTATGCCAACACTCGCCAAAGTGTCTACACTCC
CAGGTCCCGAAGTCCCGAGTTGAACTATAACAACAATCTCCAACGTATCT
ACACTCGCAGGTCCCGAAGTCCTGAGTTGAATTATGGCAACACTCTCCAA
AGTACTACACTCCCAGGTCCCGAAGTCCCGAGTTGAATTATGCCAACACT
CTCCAAAGTATCTGCAACCCCAGGTCCCGTGGTCCCGAGTTGAATTATGC
CAACACTCTCCAAAGTATCTACACTCCCAGGTGCAGTGGTCCCGAAGTCC
CGAGTTGAACTATAACAACAATCTCCATCGTATCTACACTCCCAGGTCCC
GAAGTCCCGAGTTGAAGTATGCCAACACTCTCCAAAGTATCTACTAACCC
CAGGTCCCGAGGTCACATTCTCAACAGTATCTACAACGCCAGTTCTCGAG
GTCCCGAGTTGAATCATTTCAATATCTACAATCCCAGGTCATGAGGTCCT
GGGTTGAAATATCTTATATTCCAAAACAAAATCTCTACTAAAAAAACACT
ACAACATTTAAAGCCAAACTTTAAATCGGCAGTCAGTAACTGGCATACTG
ATACTGGCAAACTGAACAGCCATAATTTGAGGGCCTACTATTTACCCTCA
AAAGAATCTTCCCTAGGTTTTTTCAACTATAATCAATTCAAATATCCAAA
ATTCCAAAGAAAGTAAGTCCAATGTTCGGTCAAGTCCAGCAACGTTTTTA
TCCAAAATGTAGTCGATATAATCCAATATATTTTAATGATTAAGTAAGTT
TTCCTTGAAGTTATCCAGTTTTTCGTGAATGTGCTTCTCGATTTCAGATT
TTCTTCTCATTCGACCATGCTGATGCATAACACTGACCAAATCAAAAATG
TTTTTTTTTTTTCAACAAAAGAAGTAAAAACAAACAGTTACTATAAATAA
ATAGTAAAAATGTATTTTTAAATTTATTTTGATCATTTATATTAAATTCA
TTTAGACTAATCCTTAACAAAATGGACAACAATANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTTTTCCGCGGTGGAGAAGGGAGAACTGTTTGTTGATAC
GACTAGATATTTTTACGTGTGTTGCTTAAGAGCCATTTTCTTAGGGATAT
GGACAACGTCAGGAAGAAATTTCCTCAGAATTGCTTCATTTTCAAATATT
TTGTTCAAAACCATGATTGATGCAACTTGTCAAAACCATGATTGATGCAA
CTTGTCAAAATTTTGAATGTTTGAAAATTCATACCAGATAGTTGGAATTC
GGTTTAGGACTTTCTTTTTTCTTTGTAATATAATATGGAACTACTATTTG
ATACTTCACTTGGTGAAAATTTGAGTCCTGAAAACCATGGGCTAACTTAA
GAAAAACTAAAATATTTTAGAGGTCATTTTCTTGCAAGGCTCTCACTACG
ACATGTTGGTTTTTGGATTTTTAGTCGTTTTTGTAGTCTTTAGTAGATAT
GTTTTTTTTTGGTAGTGAAGAAGTGGGTTAGGATGGCGGCTTAAAAATGA
CCTTTAGTGAAAAATCGCCATTCTTCCCCAGTCCATTTAAGCCAAGGTCC
TCAGTTGTGAGGTGTTTATTAGGTTGTTTTGGACTCTCCAGACAGATATA
CGTTTTGACAGTCGAAAAAAGTCCAAAGATTTCCATGTGGTCTAGCCTCG
TTAGACCTGTTGAAGGCCGAGAAACTAGGCTTTTTAGCTTACGCAGGATT
GCCCTTAGCAATCTTAGTAAACAATTACATAGTGACAGAGATTACAAACC
ACGGTACGAAATTGTACCGATTTTTTGAATGGCCGCCCTGTGATTTATGT
TGTTTACTATGTCTGTGTTTTTCATGTAACTAAAGTAACAATTTGCAAAT
TTACGAATCATTTACATCCTGTTCCTATTTTATTTTAATTATAGTACCCG
GGATGATATTCTCAATGGGATGAATTTGGTGACCATGGAAAAAGTTGTTG
CAGCGGTTTGCGAAAGACAACCTGACCAATAATACACTGACAGTCAAAGA
GAAAAGAAGATTATCCTTAACTATCTCTTGCTCAGCAGGTGAGATGAGGT
TTCTGCTTCAATTGATGGATACACTCAACATTACATTTGAAAATTTGTTC
TTTTGATAAAATGTGCATTATTTGGTCCTAACATAAATTGCATTTTCCTA
AACTTGAAACGCTACCGTTCCTCAATTACATGTTTTTTTTATAAGCATAA
CGTTTATAAGCATATGCAGGCTCAGTTTTTGGTACCTAAACAATGGCTCT
ATTGTTTGAGAACAATAGAATGCTAAGCATAATGCGAGCCTGACATAGGG
ACAGACACTTGCCTTTAAAAAAAAACATGTACATATTATAAACACTTTGA
AAATTAAGAATTTTGTGAGCTTCGATTAAGATTTTAAGATACAGAGACGA
AGATAGATCATCCATTAATGACGAAGACATAGCTGTGGTTTTCTTATACT
ATATGGTACCTTTGTAACCCTTAGTTAGATTCTTGAGGTTTGACCAATGA
AGTAAAAGCCCGAAAGACTAGACGTGAATCTCCTACATAGGATTTGAAGC
CGCTAAACCCTACCTAAAGCTACACGGCCTTGTGCGTGGCCCGGTCCGTC
GTCAAATCTAGCGATGTATATCATAAGTTTCATTTTTTCTTACTTGGGAA
AGGTTAATGATTCGCTTCTAGCCCTTCGGGATTTTACTTCATTGGGTGTG
ACATTTTTGTGCTCAATATTCAATGCAATCATTTTCCGAAATTCATATTT
TTCTAGGTCAGGGGAATGAGAAGACAGACCAGTACGAAATATTGCGAACA
AGAGATAACGAGTCTGGTAGATTGACCGAAAGATTCTAATGGTGAGCTTC
GTGTATTGCTTGTATTATTACTCGTTGATCCAAAGAAATGGAAAGAAATA
GAAAAAGCGCTTCTCGAAATATGGCTCGTCATATTTCAAGTCCTTTGCCC
TTAAGGGAGTTTTCAGTTTTGGGTTAATGGATTTCTTTTGTTGTCGCTAT
AAAAACTTTGTATAATTGGCGTAATGTGACGACGTCATCAATTTTTTTTT
CCAGGAAATTTGTGTCATGATGGAGAACATCTGTACCAAATTTCATGACT
GTAGCTCTCCTAGATAAAAAATAATCGAGGGTGGTAGATTCTACCCCCTC
CCCCTGGGGATACAAAAGTCAAAAAAACTTGGGCTAATAGGGTTAAGGGA
GTTTGTTTCGGGTTAATGGATTTCTTTTGTTGTTGCTATAAAAACTTTGT
ATAATTGGCGTAATGTGACGAATTTTTTTTGTTTCAGGTCAAATAATGCG
AGAACATTAGGGGCTTATAGTTTGGAGACACCTCTTTCTTACCAAAAGAT
ACCTATATTTTCTTGCTCAGAATTTTCTAGCGATTCTAATGATATAACGG
CATCACGACGGCATAATTAGATAAAAAGATAAAGTGTGAGAAAAAAAGAA
ATTAAATCTGTTTTTAATGAATTTCTTGCAAATTTTCTCCAAGTAACTTG
ATATCATTGTGATGAAAATTTTTCTAACTAACTCAAGTTGGCTTAAAATT
TGTTACTGGATGCTGAAAGTTCAAGGGTAATGGACCAAAAACAAAAAATA
TCGATCCACTTTTGTAAACATATAGAAACCAGCTCTCTTCGCAAGACGAG
CGGATTTTTTCTGAACCTTTTCTAATTACCTAATTAAAGCTAAAACAAAG
GAGTTCTCATGGGAACGGTCAGAACATTTTGGGTAATCAGAGAAGCGCTT
TTTCTATTCCTTTCCATTTCTCTGGTTGATATTTCACTCAAAAGATCCAA
GCATAGAGGTAATAAAAAATAGATGGAGTAACAACTTTTCTGTAATAGCC
AGAGAAGTCATAAAACTCTTTAGAAATTTCTTTCAAATCGGCCTCCTTTG
ATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCATTCTTTCAAAATAAACAAAAAT
CGTTTAATTCTGATAAATCTACAAGTCAAAATCTTCATTTTAATGAAAAC
CTCCGTTTTGGGGGCCGTCTCCGTTTTATGGGCCATATACTGTATTAATA
TTGTTCAAAACATGGCCGAGTTTAATTTTTGAGGAAAATTTTTTTCCGGC
CGAAAATGCCGTAAATATGCCGGAAATCACCGTTTTTCTGGATTTTCATT
GGACTTTTTCCTTACAATTGGTTGTTTTTTCATTCAAAAACATTATTAAT
AGCAATGCGCCCACCATCAAGCATGTTTCAATTGTCAATAAAACTGATTT
TTGAAGCCAGAACTCTCTAAAAATCGCTGGAACAGCCAATTTCTTGAATT
TCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACACTGATGCAA
TATGACAATACCTAAAAAGTGACGGAGCCCGATTTTAGAAAAACATTTTT
TTCTGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTTACAT
TTTCTCGAATTTTCATCAAAAGTTTTATCTGATTTTATTGCAGAAAGATG
CGTATTCCTAATGCTCAAAACATGGCTGAGTTTGATTTTTGAGAAATTTT
CTTTTTTGGTTGAAAATACCGGAAATCGCCGTTTTTGCAGATTTTCGTAT
GATTTTTTCCTTGTTTTTCTATGTTTTTCACACAAAAGCATTATTGAAAA
CAATGCTCACCATCATCAACCATGATTCAATTGTCAATAAAACTGATTTT
TGCGACCAGAACTTTCTATTTTTTTCCCCTACAACCCTTCCCTATCCCCC
CATCAACAATCAATGAGAATTTATTGCGTTATGCATTTTCGCTAAACGCT
GTATTTTTTGACTGATTTTTTTCTCCTCGAATTGCTATCCAACTTTCATC
ATCAGGTAGGTCCATTCAGCATCTAGCTTGTTATTTGCTTAATGGTCAAA
TAGCCATGTTTGGACTTTTTCTTGTTGACTTGAACCAAAATACTAACATG
TACTAAACCTTCGCAGAAAAGACAGTACCGTTCATTGCGGTAAAATTTAC
CGGTTACTCATTAGATCTATGCACCTTACCCAACTTCTATGATGTCATTC
TTTTTTTTCCAGTCAGACGAAACGAACTAAAAGCGTCGCAGCGCCCTCTC
CCAATCAACTGTTGTATATTTTGAGTAAATGAATATCTACGCTCATGGTA
TCAAGCATGAAGTTTAGAGCCCGATGATTACATACGGCTGACGGTATTTA
TCAGGTAAATAACTTTGTGATTACATTAGATTTCAACAATAACGAGGGGG
TTTATCTAAAGAATCCTGCATTACTAAAAATAGACAAAAAGAACGACAAA
TTTCATAAAAAACGACATATTTCGCCGTCCACAACTCCGACCGAAAGTAA
CTGTACCACCCCTAGCGATTCAGTCCCTTTCGTTTATCACGGGAATTAAT
TACATGTGATGTAAAAGAACGACAAATTACGCATGCGTGTTACAATGCAG
GATCCTTTAGAGGAACAGACTGTAACCTACTAACGCGTGGTTACTGAAGA
GTGATCGAATTGAAACCTCTTCTTTAAAAGAATTTCAATTTTGACGTACC
TTGCATAGGCTGTATTTTTGTAGACCTAATTCGAAAATGGCAACAAAATA
TCGAAGAAGAAAAATATGAAGACTTTCTTAACTACCTGAAAGTTCAAAAG
TTTTCATTTTAAATCACCAAATCTTTCTTTTGATACAGGGTGATGCAATA
CATAACTCCAAGCAATCGTCAAGCTGCCATGTGGGAATGCTCTTCCTCGA
CCTTGGAATGATCTCTAACAGGTTAGATTGGGTTTTTTGTAACTGCAATT
ATACCAATGTAACTGCAATTTTCCAGTCTCTTACTCTCTATCTGTTTTTA
TATGTTCACTTTAGTACATCTAAAACATGATGCTAATGATGTTAGAAGTA
AAGAGAAAACAAAAAATATAATTACAGTCGAAGGCCTTAACAATAAAGGG
TCGTTACGAAATCCTGTAATTCTCATTTTATTGGATTCTTAAGCCACGAT
GTTTGTTCAATTACCACTCTCGAATTTCTCAATTAGATCTTCTATTGTGA
ATGATAGTAGAATCGAATCTTCCCTTCAATAAGTCCCACATTGATTTGGT
AAATTGTTAATTGTAAATTGTTAATTTTGAGTTTTTCAAATTTAAATATT
CTCTCTATCCTTTATTCCAGGATACGAATTTGTGGCATGAGCATCCCCAT
TATTGTGGCTTCAACAACCTGGATTCGATTGGTGGATGAAATTTGTGATA
ATGATGGAATTGTTTTGACATAGCTGATGGATGTTGTCTTCTCCGTAGAT
GCAGTTACTTGCTTGGTGATTGTTGCGAACCATTGGTGTATTTATAAGAG
TATTCAATACAATCGTTGAGATATGGTATGATATGCTGATGGATGGATTA
TCTAGAAGTGATTTCTTTGGTTGAAAGATGACCTCTTCTAGCCCAGTCAT
CAACCGTGGCCAATGTTGCTTGGCCAATGTTGCTTGGCCAGTGTTTCAAA
TCAGATCGTTCTATTTTTGGAATGAAAAATCGTCATTTGAAGAGCGACTG
TTAAATGAAGTTGTCTCGATATCAATTCTGTAATATTGGTTACCAATTCT
TTAGTTCTTTTTGCCTATTGATTAAACTATTTTGATGGGTTAACTTATTC
GAGTTCGAAATGAATAGTTTACCTTTTCCTTCTAAACAATGATTTGTGTA
GAATTTAAGCACCCCAAAGAAGCCTACATTTTGATTTTGTTGTGGTTTTA
GTTTGTCCCAAGCTTTCAAACCTTATTTGTGTGAAAGGAGACATATTTTC
AAAGAGTTTACTTTAATCATATTTCACAAATAGTGTTTTTACCAGTGTAA
ATAATTATTTGTGGCCTGAAAGGGACTTTTCTTAAAATCGAACTTCGTTT
TGGACTTTTCACTGCCAGGAAATTCGAGTTTCATTTTGTGATAGTATAAC
TAAATTCTAGATGAAGTTTTTCTTTGTCAGAATCGATTTTCATCAGCGTT
TTACAACTAAAGAGCATTTCATTTATATCCATACATGGGATTGGACGAAC
ATTTCCAGGGTGGTCTCCAAAAAAAGAAAATTCCGGGGGGTCCCAGGTTA
CTTTACGCACTTTTTTCAGGGAGTTGTTTTCCAAGGGGAATTTCTTTTGG
GCATGAATAATTGGCTCGTTTATTTTCTAATGTTCAAAGTTTTGGAATTT
CCAGGAACCTGATTTGATTTTCCAGGGGGGGATTCAAATTATTTTAAAAT
TTCAAAGGGGTAAAAAATTGATTTCAGTTCGTCCTCTCTCAATGTCTTGT
TTAAAAAAGGGTTTTTTGATGGACGATAGAATCCTTTTTCCCAGATTTTT
GCAAATTTTGCCATTATTTCAGGAAATATATGTACAATTTCATTAATTCT
TTTGGCTTGAAAAGATTCGTGGTTCCTGTATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001564XLOC_001564Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002877-exon-sc0000023-1575043694:520815..521592TCONS_00002877-exon-sc0000023-1575043694:520815..521592Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1575043694:520347..520495TCONS_00002877-exon-sc0000023-1575043694:520347..520495Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1575043694:519777..519989TCONS_00002877-exon-sc0000023-1575043694:519777..519989Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1575043694:516305..516448TCONS_00002877-exon-sc0000023-1575043694:516305..516448Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1575043694:515502..515586TCONS_00002877-exon-sc0000023-1575043694:515502..515586Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1575043694:512489..512630TCONS_00002877-exon-sc0000023-1575043694:512489..512630Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1575043694:511922..512004TCONS_00002877-exon-sc0000023-1575043694:511922..512004Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1575043694:510260..511522TCONS_00002877-exon-sc0000023-1575043694:510260..511522Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:520815..521592TCONS_00002877-exon-sc0000023-1510915933:520815..521592Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:520347..520495TCONS_00002877-exon-sc0000023-1510915933:520347..520495Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:519777..519989TCONS_00002877-exon-sc0000023-1510915933:519777..519989Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:516305..516448TCONS_00002877-exon-sc0000023-1510915933:516305..516448Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:515502..515586TCONS_00002877-exon-sc0000023-1510915933:515502..515586Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:512489..512630TCONS_00002877-exon-sc0000023-1510915933:512489..512630Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:511922..512004TCONS_00002877-exon-sc0000023-1510915933:511922..512004Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1510915933:510260..511522TCONS_00002877-exon-sc0000023-1510915933:510260..511522Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:520815..521592TCONS_00002877-exon-sc0000023-1491911889:520815..521592Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:520347..520495TCONS_00002877-exon-sc0000023-1491911889:520347..520495Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:519777..519989TCONS_00002877-exon-sc0000023-1491911889:519777..519989Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:516305..516448TCONS_00002877-exon-sc0000023-1491911889:516305..516448Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:515502..515586TCONS_00002877-exon-sc0000023-1491911889:515502..515586Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:512489..512630TCONS_00002877-exon-sc0000023-1491911889:512489..512630Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:511922..512004TCONS_00002877-exon-sc0000023-1491911889:511922..512004Clytia hemisphaericaexon
TCONS_00002877-exon-sc0000023-1491911889:510260..511522TCONS_00002877-exon-sc0000023-1491911889:510260..511522Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:510260..521592 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.646237	1.53199	0.614913	0.460338	3.63507	1.26219	1.12484	0.575344	0.24335	0.341297	1.09384	0.581854	0.24222	0.452802	0.145276	0.0537965	0	0.0673202	0	0	0	0	0	0.0945624	0.792752	0.261282	0	0.212595	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002877 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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