TCONS_00072872-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072872-protein
Unique NameTCONS_00072872-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length578

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072872-protein ID=TCONS_00072872-protein|Name=TCONS_00072872-protein|organism=Clytia hemisphaerica|type=polypeptide|length=578bp
MGWPSKAVIKWWAFFHMVTFILIKDIQSISECQFYYWEVNQTLHNGGTSF
GQNQCNRRSGGAEDTNFPRFEISWIPAPPYLIDDEGSDTPKGFFFDMIED
WIKTSCTNSHLSWKPTSIRWRKRPQDSVKDLVEWCRDNVYDCSMSVPAVG
VSKKNGGNGIVYHEPFAALYKVPDVVYVTVEGETWRNAIDSFSQSVINLW
PFIMLCLLCAFISGAIIWFLDTWTNDQDFPRAFFSGTYHGFWWSFVSMTT
VGYGDKAPVSIVARSFSVIWIIIGILMICILTSLMSNGLSAAIYVPEKVV
VKAKVGVLPGIETGDIIVNELDGEVKMLKDIIELENWLARGLLTGFVMDM
YTFQHHYEERLSKLNVKYVVERRFPMEDYHYGIAFHHMDRRNPRLASKET
WRTCLEDYIEYNYHFKEKMERHYRQSVLANLDPALLKPSESPPLDLFDIN
SGFFQTILYYVLGTAATILVIGLIYEFFRLVFFGENGIDFSQKLGLAHNA
GYTADGESAEQAKTDSPNKKMTREERQMAELVEQSIQRTEDKMQGVERDV
KNEIREMVRSIRRQIHEMKRKQDKDYGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045222XLOC_045222Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072872TCONS_00072872Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR005821Ion_trans_dom
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0005216ion channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0006813 potassium ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005249 voltage-gated potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 529..571
NoneNo IPR availableGENE3D1.10.287.70coord: 183..548
e-value: 1.8E-19
score: 69.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..525
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 194..290
IPR028325Voltage-gated potassium channelPRINTSPR00169KCHANNELcoord: 234..256
score: 54.64
coord: 263..289
score: 15.62
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 171..287
e-value: 2.1E-12
score: 46.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072872-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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