TCONS_00072153-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072153-protein
Unique NameTCONS_00072153-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length478

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072153-protein ID=TCONS_00072153-protein|Name=TCONS_00072153-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MSTSNLFHEIMQCSAVWYHPWLREPAAEINRIRLLATQYTSERMVTYSNL
MGMEMLANDLQKPKPSLSVKTEKNMNEADEKLATLNYVSDLKTKTKSKML
KEYEQKMGKPGNKRPLSRIPLWYFLHEILDVERCNDMIGWECEPELIFTI
KKPKELACLWGQIKSRENMTYAKLARGIRYYYGKGVIEKFNGKRFCYQFI
VSKKTKAVLSKRKNIPQEIISTKSRHDRKRKSPLPDTYKNDSKKSWENRS
QDGFTNTSVKDWTSDDDDIISDSDLSSLDQCISDIFTDPKFATFFPDVSL
ENKVFPTSVSTTKLDSDMFIMTRQPSELGIFPTLDDMSQFISTSGPTETL
TDCLQQKEDLVDLSNLQDSQLFDIYDQDNSFDGYQPKQYRDHQEVQWDRK
KSKSESEAFFQDFFNQNTSSLQRSSATVRSLPDFSIIDNNVSTLKPEDQY
GFFTNMLLDQEDTHTQSRSSSLNDYFNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044810XLOC_044810Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072153TCONS_00072153Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000418Ets_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000418Ets domainPRINTSPR00454ETSDOMAINcoord: 163..181
score: 49.35
coord: 182..200
score: 39.96
coord: 119..132
score: 41.66
coord: 144..162
score: 34.44
IPR000418Ets domainSMARTSM00413etsneu2coord: 118..204
e-value: 3.4E-29
score: 113.0
IPR000418Ets domainPFAMPF00178Etscoord: 121..200
e-value: 1.1E-24
score: 86.6
IPR000418Ets domainPROSITEPS50061ETS_DOMAIN_3coord: 119..200
score: 24.262
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 103..228
e-value: 4.5E-28
score: 97.1
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 119..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..252

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072153-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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