TCONS_00072022-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072022-protein
Unique NameTCONS_00072022-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072022-protein ID=TCONS_00072022-protein|Name=TCONS_00072022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MGNRSLEALQQEVEAREKVLLTENEGVENYENLMSTGRPTDSKRRQPFRT
FPCVYCGNASHKAYQCSKISKPESRKDFLIKQKRCFKCLKIGHDSKSCRS
MRSCYHCRKNHHSSICKTFKKEEDTPEDTQSNLASSSCTVLLQTAKAKIE
NVEKNRSSESXLSRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044722XLOC_044722Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072022TCONS_00072022Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..160
NoneNo IPR availableCOILSCoilCoilcoord: 162..162
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 84..100
e-value: 0.046
score: 19.5
coord: 52..68
e-value: 0.67
score: 12.3
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 39..90
e-value: 2.3E-6
score: 26.8
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 91..122
e-value: 0.0016
score: 17.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 84..100
score: 8.598
IPR001878Zinc finger, CCHC-typeSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 81..114

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072022-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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