TCONS_00070339-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070339-protein
Unique NameTCONS_00070339-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1341

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070339-protein ID=TCONS_00070339-protein|Name=TCONS_00070339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1341bp
MLLNSKIIAKMDISSMQTCELCPGKIFLSQMELDHHKSSHQAENESVRNI
TSTKLAQLKKTKKILSAKFKAIKNEVSLMCKWNVHDEKAVGLLEKELVSL
KQQIDEKDTVIKLFSENQEKSATDDLVYEFKKRLDTEYEELMRRAIKRDQ
PQTSSSNLSISAGPSKEHSSSNCTCATAETNLEKFSEEVSELKEKKXKEH
SSSNCTCATAETNLEKFSEEVSELKEKLSEYTAMVQDMTLKNQEVEGDLA
QAVEALESSNITIRHMIQDKEKIEARLRANEEKIKEQYKLIQDHEKRSPS
VEIQEKIALLHEQLTATDEELVHLMDCVDEKECDLAHAHSEQKLMENENV
ILTQLIDELREEQKEMCLQWEDEMKELLSKQRSLEQENQSFLCKLADYEV
ASKDQTVKIDQLTLYVEELERQKAQDKEQIVLLTAERDEFKLNLISLQQT
HEKCIAEKQELIASSEKSVEDMRLKMQKYLDDEKETSQELQANLEEQLKE
LRRKHRTEISKYDGERLNLQNTIEDLEKEINIAKALPKVDTGKVKSLEKD
LSDANFQLSNKAELEYTVEELKKDLNSIQKSLDVANSRKDSFRKEISELK
ELLDTEIGKTSDFRRQRDLAEKKFNNRQQQLARAEEDVATIKTQLVGLKK
QLALKDTEHQRERERLMVQINDLQIEKDHAQKSVCENQKLQSDIAKITSE
NETLSIKVSNKNKSEKNLTDEIKCLTKKVQRLDVVSAGNEKLTSQNEALC
AEISNMKELEKSHVEEIQSLTIKINDLEKLQQSAPSKDKLLHLEEELASA
KEQQEEIIFTNDKIKKQYNAAKNKLATSLDETEHLKEKSLQAEKLTKDTE
LLLEKKHKELEAKTTKLQKQDREISQFLDQRSDLKSKITKVVKNSEKLKM
AKELAEQKLKEEKIRTTELGEIVNELRDKDHKATEALLFEEQRKRSDLEE
IIDQMKLKEHQTHKELTSEKQKTSKLEQMVIQMKAEMEAIKMANQSSKAD
EFSQRTEETVEQPIPLFPAKSETSGKQQTRIVNDDFSDGVSACSSEEEEI
TPTASQISLSGEIPEQADRDESIIDDDEQRQPQQVSENVDFYSSDDDLNT
ALVRKETVVYRTSPLVPSNDDEHDIEIPKRQLSEKIINGFEKSHNEDFGD
LSGKYVKVISEKPSLDASVTHNHASLPDLVLNNSVNSSDSDVSLKTDSSS
SESLPSSGSSSSESINKSSNASKRNKKENKKSKKITNKHMPIHFSNNTSP
GESQKGEEHSNHKMLDDKSNNKRTPKADGNRKLKSSGAKTQPIVSQGANI
RRLSAVFSKETITPVVTHKCFPQPSKISSIKEKFENLGCRD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043810XLOC_043810Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070339TCONS_00070339Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 938..958
NoneNo IPR availableCOILSCoilCoilcoord: 455..475
NoneNo IPR availableCOILSCoilCoilcoord: 342..387
NoneNo IPR availableCOILSCoilCoilcoord: 561..602
NoneNo IPR availableCOILSCoilCoilcoord: 850..887
NoneNo IPR availableCOILSCoilCoilcoord: 687..707
NoneNo IPR availableCOILSCoilCoilcoord: 175..196
NoneNo IPR availableCOILSCoilCoilcoord: 663..683
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableCOILSCoilCoilcoord: 198..202
NoneNo IPR availableCOILSCoilCoilcoord: 480..536
NoneNo IPR availableCOILSCoilCoilcoord: 739..759
NoneNo IPR availableCOILSCoilCoilcoord: 207..241
NoneNo IPR availableCOILSCoilCoilcoord: 895..915
NoneNo IPR availableCOILSCoilCoilcoord: 263..297
NoneNo IPR availableCOILSCoilCoilcoord: 617..651
NoneNo IPR availableCOILSCoilCoilcoord: 409..436
NoneNo IPR availableCOILSCoilCoilcoord: 811..838
NoneNo IPR availableGENE3D1.20.120.330coord: 608..733
e-value: 0.074
score: 12.2
NoneNo IPR availableGENE3D1.10.287.510coord: 492..607
e-value: 5.9E-6
score: 26.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 19..40

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070339-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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