Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00066939-protein ID=TCONS_00066939-protein|Name=TCONS_00066939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=217bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR002715 Nas_poly-pep-assoc_cplx_dom IPR016641 EGD2/NACA
Vocabulary: Cellular Component
Term Definition
GO:0005854 nascent polypeptide-associated complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0005854 nascent polypeptide-associated complex
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
20 40 60 80 100 120 140 160 180 200 Expect = 1.5E-26 / Score = 104.2 Expect = 9.6E-23 / Score = 79.9 Score = 18.445 Expect = 1.3E-16 / Score = 59.6 Score = Score = Expect = 5.32776E-17 / Score = 70.7299 Expect = 130.0 / Score = 0.1 Expect = 6.1E-66 / Score = 219.6 Sequence SM01407 PF01849 PS51151 G3DSA:1.10.8.10 mobidb-lite mobidb-lite cd14358 PIRSF015901
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002715 Nascent polypeptide-associated complex NAC domain SMART SM01407 NAC_2 coord: 75..131 IPR002715 Nascent polypeptide-associated complex NAC domain PFAM PF01849 NAC coord: 75..130 IPR002715 Nascent polypeptide-associated complex NAC domain PROSITE PS51151 NAC_AB coord: 72..137 None No IPR available GENE3D 1.10.8.10 coord: 180..215 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 140..181 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..81 None No IPR available CDD cd14358 UBA_NAC_euk coord: 180..216 IPR016641 Nascent polypeptide-associated complex subunit alpha PIRSF PIRSF015901 NAC_alpha coord: 1..55
Blast
BLAST of TCONS_00066939-protein vs. Swiss-Prot (Human)
Match:
NACA (Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1)
HSP 1 Score: 219.935 bits (559), Expect = 8.843e-73
Identity = 135/211 (63.98%), Postives = 156/211 (73.93%), Query Frame = 0
Query: 10 TETVTSPMEETPAEDPSATSETESDSDDEVPMLE--DVEDDATNKSDAFAAAGIQEEPVSKSKQSRSEKKARKAIQRLGLKQVTGVTRVTIRKTKNILFVIKKPDVYKSPTGDTYIVFGEAKIEDLSQQAQVQAAEKFK-EPEPVNPAVSDTKVEAADAEESDDEEVDETGVEEKDIELVIQQSNVSRKKAIKALKKNDGDIVNAIMELTM 217
TETV + +E P S TESDSD+ VP LE D T ++ AAA I EEPVSK+KQSRSEKKARKA+ +LGL+QVTGVTRVTIRK+KNILFVI KPDVYKSP DTYIVFGEAKIEDLSQQAQ+ AAEKFK + E V+ +T+ E ++E DETGVE KDIELV+ Q+NVSR KA++ALK N DIVNAIMELTM
Sbjct: 6 TETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEV-DETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM 215
The following BLAST results are available for this feature:
BLAST of TCONS_00066939-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M T A E V E T A Q T E T V T S P M E E T P A E D P S A T S E T E S D S D D E V P M L E D V E D D A T N K S D A F A A A G I Q E E P V S K S K Q S R S E K K A R K A I Q R L G L K Q V T G V T R V T I R K T K N I L F V I K K P D V Y K S P T G D T Y I V F G E A K I E D L S Q Q A Q V Q A A E K F K E P E P V N P A V S D T K V E A A D A E E S D D E E V D E T G V E E K D I E L V I Q Q S N V S R K K A I K A L K K N D G D I V N A I M E L T M 20 40 60 80 100 120 140 160 180 200 Expect = 8.84e-73 / Id = 63.98 Sequence NACA
Match Name E-value Identity Description
NACA 8.843e-73 63.98 Nascent polypeptide-associated complex subunit alp... [more]
back to top
