TCONS_00066397-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066397-protein
Unique NameTCONS_00066397-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length391

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066397-protein ID=TCONS_00066397-protein|Name=TCONS_00066397-protein|organism=Clytia hemisphaerica|type=polypeptide|length=391bp
ISKSCHYRIKTFKMSSLTDQTEYLRKKKEEILAKKKAQEEQKKQGVKPES
TVSFANDGSFLEKFKSIQNQTKTPDIKKEPQSTAAPMAFANDGSFMERFK
AMQEKGIKQEPDYQKMENVKPAISKKTSRFDQRPSSTSTSAQIMSSIQRP
ASVFEDNAPTQPPQADDYEVARELAEKVYKEGKQAEMIARIQGRTNPKYK
FLFNDKSPVAQYYQRQLENMKESSSIPSLSTATNSSSQPSAVAGSSSASS
SGGSSSINLMADFERAKALVKAKAAAMKEGGISAVSSAASEEEERRQKAI
EEQKMMNEIYMKVITQQMAAASEANKKRKRKRDPDKPKYEYDSDEDIEGG
TWEHKKRTLEMQKTAGKLFQEYCLASRTFFSLISRPKVEFH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041558XLOC_041558Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066397TCONS_00066397Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000061Surp
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006396 RNA processing
molecular_function GO:0003723 RNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350Score = Score = Score = 8.997Score = SequenceCoilmobidb-litemobidb-litemobidb-litemobidb-litePF01805PS50128SSF109905
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..346
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 172..217
e-value: 1.2E-5
score: 25.1
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 170..213
score: 8.997
IPR000061SWAP/SurpSUPERFAMILY109905Surp module (SWAP domain)coord: 160..220

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066397-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350Sequence
Match NameE-valueIdentityDescription
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