TCONS_00063637-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063637-protein
Unique NameTCONS_00063637-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length509

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063637-protein ID=TCONS_00063637-protein|Name=TCONS_00063637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=509bp
MNLALKLLTTYVLCFTTLTTFFIVYNLRNIPNNNGNLILQNIICNDDHGR
RFSKKMRKKFDSASWGEARPADKFTNLKDGRDEVPSLIKLATRLPSSKEK
ESTEPEGLNEIIKTIKRDIFSLIYKDPRLRYDKELQPDLSKFKEPFSLFS
EDQILLRSIFRAREGSIDFDNDRIQKQISLKIKRTDPSKKLILLMFKSND
LNEHGLVTNKCHHKDCIFTNDVSEAENADVIVFNGPSKQMIDHTRNRKNQ
IWIYHTIESPVHNLNFDTPVQINWTATYRSDSTIPTPYAKFVPFEHIERL
PYVADKNYATGKIKLAAFVVSNCDAENGRLDYIWELKKFASVDIYGACGD
LKCNRDECFEVIKKDYKFYMAFENSNCREYITEKFFRNALQHDVIPIVMG
AHPDDYKRVAPPNSFIHVDEFNSPRQLAEYMHILDNNDDLYNEYFRWKGT
GEFINSKFVCRVCAMVQATPSLPFASYDINKMLTSAKHQCLSNDPTNNKW
FSWKRKKLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039888XLOC_039888Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063637TCONS_00063637Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001503Glyco_trans_10
IPR031481Glyco_tran_10_N
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 312..469
e-value: 4.5E-54
score: 182.7
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 189..288
e-value: 1.1E-16
score: 61.2
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 190..468

Blast
[Close]
BLAST of TCONS_00063637-protein vs. Swiss-Prot (Human)
Match: FUT6 (Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens GN=FUT6 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.226e-40
Identity = 93/263 (35.36%), Postives = 133/263 (50.57%), Query Frame = 0 
Query:  215 DCIFTNDVSEAENADVIVFN------GPSKQMIDHTRNRKNQIWIYHTIESPVHNLNFDT-PVQINWTATYRSDSTIPTPYAKFVPFEHIERLPYVADKNYATGKIKLAAFVVSNCDAENGRLDYIWELKKFASVDIYGACGDLKCNRDECFEVIKKDYKFYMAFENSNCREYITEKFFRNALQHDVIPIVMGAHPDDYKRVAPPNSFIHVDEFNSPRQLAEYMHILDNNDDLYNEYFRWKGT---GEFINSKFVCRVCAMVQ 467
            DC  T D      AD ++ +       PS Q+    R R+ Q WI+ ++ESP H           N T +YRSDS I TPY    P+      P +      + K +L A+ VSN    + R+ Y   L+    VD+YG        +    E + + YKFY+AFENS   +YITEK +RNAL+   +P+V+G    +Y+R  PP++FIHVD+F SP+ LA Y+  LD +   Y  YFRW+ T     F  +   C+ C  +Q
Sbjct:   89 DCNITADRKVYPQADAVIVHHREVMYNPSAQLPRSPR-RQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFTPYGWLEPWSGQPAHPPLN----LSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHK-PLPQGTMMETLSR-YKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQ 344
The following BLAST results are available for this feature:
BLAST of TCONS_00063637-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT65.226e-4035.36Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens G... [more]
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