TCONS_00063283-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00063283-protein
Unique Name	TCONS_00063283-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	607

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00063283-protein ID=TCONS_00063283-protein|Name=TCONS_00063283-protein|organism=Clytia hemisphaerica|type=polypeptide|length=607bp
MHFGCHTQKHHQQIQHRHRGLTHKDQPITSDKNHHHTMSTTKTDAAKEAT
ETGVQHQESEDDFKGYASFSPPDGGFGWCVVLAAFSVQFFVLGTMNNFGI
LFTKLLEEFGESKQATSWVGSITYGLMFGTGPIATSVSERIGCRPVAIIG
ALVGMVGTLLASFSDSIFKMYLTEGFLFGVGASLCYFPSVIILPQYFYKN
LSMANGLVACGSGVGTMAMGPVINYVIENYGWRTSCRMTTGLFLICALIS
LTYRPNEVLQRMLKNARKDQRQPLLDTTVFQNKGFLAFTAALFIFMLAYF
VPFVHLTQMALEYDIPMSKASLLIGFMSVASTFGRLFFGKIADFKCINRL
YMYQIGLLGIGVANTICPLLKSFPGLLVYCTIFGFFEGCYVCQVAVITGD
IVGIDRMAVAVGILFGIKSIPLTLGPPLAGFLYDISKSYQVAFYVAGAIP
TVASIMMFAVPFLIPPQDHPFWKKYGPSRQYLINSDSSDDSCIVENNNNE
KRQCDKKKYELDSDATSVGHSMDSLDKAGHPTPQKTVANRFLLQTKNDKS
FTSIGSFNHLAPFENGRLSMRQMGSISSFGSVIFSPVSPMAGARSSTYVV
VDRVTNV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039658	XLOC_039658	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00063283	TCONS_00063283	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 85..416 e-value: 1.4E-34 score: 119.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 77..265 e-value: 5.4E-26 score: 90.6
None	No IPR available	GENE3D	1.20.1250.20		coord: 266..511 e-value: 9.7E-26 score: 89.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 80..465 score: 13.568
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 81..461 e-value: 4.95304E-41 score: 150.927
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 66..464

Blast

[Close]

BLAST of TCONS_00063283-protein vs. Swiss-Prot (Human)
Match: MOT10 (Monocarboxylate transporter 10 OS=Homo sapiens GN=SLC16A10 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 8.289e-68
Identity = 143/429 (33.33%), Postives = 221/429 (51.52%), Query Frame = 0

Query:   74 GGFGWCVVLAAFSVQFFVLGTMNNFGILFTKLLEEFGESKQ-----ATSWVGSITYGLMFGTGPIATSVSERIGCRPVAIIGALVGMVGTLLASFSDSIFKMYLTEGFLFGVGASLCYFPSVIILPQYFYKNLSMANGLVACGSGVGTMAMGPVINYVIENYGWRTSCRMTTGLFLICALISLTYRPNEVLQRMLKNARKDQRQPLLDTTVFQNKGF----LAFTAALF-------------IFMLAYFVPFVHLTQMALEYDIPMSKASLLIGFMSVASTFGRLFFGKIADF-KCINRLYMYQIGLLGIGVANTICPLLKSFPGLLVYCTIFGFFEGCYVCQVAVITGDIVGIDRMAVAVGILFGIKSIPLTLGPPLAGFLYDISKSYQVAFYVAGAIPTVASIMMFAVPFLIPPQDHPFWKKYGPSR 479
            GG+GW V+LAA      V G  N  G+LF  +LE FG          T+WVGS++ G++F   PI +  ++  GCR  A++GA VG VG + +SF  SI  +YLT G +F  G S  Y PS++IL  YF K L + NG+V  GS V T+ +  ++  +I++ G   + R+      +  L   TYRP       L  + KD+      +++F  K F      F  A+F             + +  YFVP+VHL +   E         +++  + V S  GRL FG+IAD+   + ++Y+  +    IG+ + + PL   F  L+  C I G F+GC++  +A I  ++VG   ++ A+G L G  SIP+T+GPP+AG L D   SY VAFY+AG  P +   ++  +P++   +     K  G  +
Sbjct:   67 GGWGWLVMLAAMWCNGSVFGIQNACGVLFVSMLETFGSKDDDKMVFKTAWVGSLSMGMIFFCCPIVSVFTDLFGCRKTAVVGAAVGFVGLMSSSFVSSIEPLYLTYGIIFACGCSFAYQPSLVILGHYFKKRLGLVNGIVTAGSSVFTILLPLLLRVLIDSVGLFYTLRVLCIFMFVLFLAGFTYRP-------LATSTKDKESGGSGSSLFSRKKFSPPKKIFNFAIFKVTAYAVWAVGIPLALFGYFVPYVHLMKHVNERFQDEKNKEVVLMCIGVTSGVGRLLFGRIADYVPGVKKVYLQVLSFFFIGLMSMMIPLCSIFGALIAVCLIMGLFDGCFISIMAPIAFELVGAQDVSQAIGFLLGFMSIPMTVGPPIAGLLRDKLGSYDVAFYLAGVPPLIGGAVLCFIPWIHSKKQREISKTTGKEK 488

The following BLAST results are available for this feature:

BLAST of TCONS_00063283-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00063283-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MOT10	8.289e-68	33.33	Monocarboxylate transporter 10 OS=Homo sapiens GN=...	[more]

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TCONS_00063283-protein (polypeptide) - C. hemisphaerica