TCONS_00062712-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062712-protein
Unique NameTCONS_00062712-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1450

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062712-protein ID=TCONS_00062712-protein|Name=TCONS_00062712-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1450bp
APGLDKNSIGKKLQGMCLRALKSLQALNLIEMKEGDTLHSTEIGRLMARY
CITYETVKLFASATGTDNIQDLLVLLSKAKEFNDIVLRQNERTILNTLNK
DKHRATIRFPMSGKIKTTENKVNCLVQATLGCLSIVDFPLQQDITKIFRI
GQRICKFLMEYMFLNGSFQSCLAAIILYKCVRSRLWENSKFVSRQLERIG
PSLSSALVNAGIISFKKIEETNSRELELIVNRHPPFGDQIKTLVAGLPKL
DVKIEQTSQKKEASASEIVLSVRILNNEKRAEHIENLKTRKQFVQGYIVI
VGDADNKIVFKQKVTDIQILSDDVWTRKILVQRASKSPELTVNVISQDYV
GLDYQTTFTPVYQGGFHPLPRPQSPHPNVSVKNEINRSKSAKTRVSKQAC
NHKCINKLWCGHQCCKMGLPSAQERPSEMYAPGFTPVHDDIADEPMSTSS
RKGKSSRQKSELELSLSNVSRGSPMMRFCEEIQRKKNQFPDVRPAFKKIK
VELTLENTSKKSIRDFKYNPRRLTFENHQNSGNDVDADNDVTVLSNLQQE
RSFDRHQQSIVVEDDNEIDITEFDETSGGEEQNNTFDDYSTNDRNQITQY
KGPSIFARNNQSASTGYQQNQAFNSNPGKCFKPSPPFVRSHLNNQQPSLN
RQHSSKSNDPDHTPPAKLSVYQAGPLRNQPSSSNFYSSNSYSSKSSSNNC
QHSLKLTNDSNQRWNKEPFTRDQYSNPDQQNYKSLSISETTDNSSLSYQS
NFNTGLPQSTNKLTLNSRSNHNLGLSYSSPYQSTNDPLKEFEAGDGYHSN
FNNLCYSTVNFPRSKCNKDVNKFDRISSRKDRIPGNDYEFDSFLSHKVGP
SDTESSVLRNQPSRIQKPLKPPKEDIAPVYDIPDFGSDSGKESEDDLPDV
FGKRYGGDKKQSTAQERNLSTSTNDEAAYNRSNTHSQTTRQQFNSTITTT
NEVITSMSNTLGGHTFQSTSHKECYGENSGVFKAATDVTKANHSKIIQPI
TNKKTEVSQQYSHLPMAKLHSGNMDVTHRLNKESCDPTSLKVDQNNFNES
LSNPIKFHNILSTDILVKNNENLSITSMEDPDDSICFEIEKSDAKSKSSE
PYNFKGKAFSGVSSLASRFFKSGSSFPTVNDENNSSLRFFNQTKNSTIDS
NDSLDESKDPCRPNLSKGMPLSDKSNDMERPFENHSKVLLSSKSTKSKFA
PKYDSLIETLKESYSRSKDLGIDKHPAMKSTFATRPNENLSLSPSPAINI
QKEISKESNPVPSDDFIQTANLPTKHVGSDTLESDITKLLDKEQREEASR
SIASIDKLPYSCKEANESIHEPVEQPRNPIIAKPNNYPFKDSIQTRNLSP
RNFTSPSIFHQKDASFQDHRTTHTKEQSSKLCFHDSNRTTSVVDDAVVPP
WQDSIFGEIEEQDDFGFIGLENNKLSKLQSLPSKMGEDEEKTSFDFFVDI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039294XLOC_039294Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062712TCONS_00062712Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004179Sec63-dom
IPR000008C2_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004179Sec63 domainSMARTSM00973Sec63_2coord: 40..360
e-value: 2.6E-61
score: 219.7
IPR004179Sec63 domainPFAMPF02889Sec63coord: 40..358
e-value: 7.4E-49
score: 166.1
IPR000008C2 domainGENE3D2.60.40.150coord: 247..360
e-value: 2.9E-6
score: 27.0
NoneNo IPR availableGENE3D1.10.3380.10coord: 67..188
e-value: 9.1E-27
score: 93.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 843..944
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..730
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 572..596
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1148..1179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1360..1379
NoneNo IPR availableSUPERFAMILY158702Sec63 N-terminal domain-likecoord: 69..248

Blast
[Close]
BLAST of TCONS_00062712-protein vs. Swiss-Prot (Human)
Match: HFM1 (Probable ATP-dependent DNA helicase HFM1 OS=Homo sapiens GN=HFM1 PE=1 SV=2)

HSP 1 Score: 386.341 bits (991), Expect = 7.440e-112
Identity = 207/438 (47.26%), Postives = 282/438 (64.38%), Query Frame = 0 
Query:    1 APGLDKNSIGKKLQGMCLRALKSLQALNLIEMKEGDTLHSTEIGRLMARYCITYETVKLFASATGTDNIQDLLVLLSKAKEFNDIVLRQNERTILNTLNKDKHRATIRFPMSGKIKTTENKVNCLVQATLGCLSIVDFPLQQDITKIFRIGQRICKFLMEYMFLN-GSFQSCLAAIILYKCVRSRLWENSKFVSRQLERIGPSLSSALVNAGIISFKKIEETNSRELELIVNRHPPFGDQIKTLVAGLPKLDVKIEQTSQKKEASASEIVLSVRILNNEKRAEHIENLKTRKQFVQGYIV--IVGDADNKIVFKQKVTDIQILSDDVWTRKILVQRASKSPELTVNVISQDYVGLDYQTTFTPVYQ-----GGFHPLPR------PQSPHPNVSVKNEINRSKSAKTRVSKQACNHKCINKLWCGHQCCKMGLPSAQE 424
            A GL+K+ I  KLQ +CL+ L  L +L+LI+M EG     TE GRLMA Y IT+ETVK F + +G + + DL+ L++  KEF DI LR NE+  LNTLNKD +R TIRFPM G+IKT E KVNCL+QA LGC+ I DF L QD  KIFR G RI ++L +++      F   L ++IL KC R +LWENS  VS+QLE+IG +LS+A+VNAG+ SFKKIEET++RELELI+NRHPPFG QIK  V  LPK ++K+EQ ++  + +A EI+++V IL N       E L+T++     + V  I+GDADN++V+  K+TD  +L    W +KI V+RA KS +L++N+IS ++VGLD Q   T  Y      G    + R        S H ++S     N+  +A  +   + CNH C +K  CGH CCK+G+    E
Sbjct:  738 ASGLNKDGIEAKLQELCLKNLNDLSSLDLIKMDEGVNFKPTEAGRLMAWYYITFETVKKFYTISGKETLSDLVTLIAGCKEFLDIQLRINEKKTLNTLNKDPNRITIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAVLLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAIVNAGLTSFKKIEETDARELELILNRHPPFGTQIKETVMYLPKYELKVEQITRYSDTTA-EILVTV-ILRN------FEQLQTKRTASDSHYVTLIIGDADNQVVYLHKITDSVLLKAGSWAKKIAVKRALKSEDLSINLISSEFVGLDIQQKLTVFYLEPKRFGNQITMQRKSETQISHSKHSDISTIAGPNKGTTASKKPGNRECNHLCKSKHTCGHDCCKIGVAQKSE 1167
The following BLAST results are available for this feature:
BLAST of TCONS_00062712-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HFM17.440e-11247.26Probable ATP-dependent DNA helicase HFM1 OS=Homo s... [more]
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