TCONS_00060994-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060994-protein
Unique NameTCONS_00060994-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length190

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060994-protein ID=TCONS_00060994-protein|Name=TCONS_00060994-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MARIEWAMWANENAVIACATLFVGGLLAVCSLADVEHVRWEVGAYGMAIA
LIIFFLEYPRGKRTRGNTRQRSMQHIPTNFVASMGFFGRNYFVRFILYFL
CAVPTVFNLGTVTGGISLLITSIIYLRAAISGESWQPCEKQVTREKTLTR
ARPPSMAPPRMAANAKKNAAYAPGDDENENYQNSGSVVKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038293XLOC_038293Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060994TCONS_00060994Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007732Cyt_b558_asu
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0020037 heme binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007732Cytochrome b558 alpha-subunitPFAMPF05038Cytochrom_B558acoord: 3..171
e-value: 5.1E-44
score: 150.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..190

Blast
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BLAST of TCONS_00060994-protein vs. Swiss-Prot (Human)
Match: CY24A (Cytochrome b-245 light chain OS=Homo sapiens GN=CYBA PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 3.364e-33
Identity = 63/146 (43.15%), Postives = 83/146 (56.85%), Query Frame = 0 
Query:    1 MARIEWAMWANENAVIACATLFVGGLLAVCSLADVEHVRWEVGAYGMAIALIIFFLEYPRGKRTRGNTRQRSMQHIPTNFVASMGFFGRNYFVRFILYFLCAVPTVFNLGTVTGGISLLITSIIYLRAAISGESWQPCEKQVTREK 146
            M +IEWAMWANE A+ +   L  GG++A          +W  GAY +   + +  LEYPRGKR +G+T +R  Q   T  V   G F RNY+VR +L+ L +VP  F L T+ G   L I S IYL AA+ GE W P E +  RE+
Sbjct:    1 MGQIEWAMWANEQALASGLILITGGIVATAG----RFTQWYFGAYSIVAGVFVCLLEYPRGKRKKGSTMERWGQKYMTAVVKLFGPFTRNYYVRAVLHLLLSVPAGFLLATILGTACLAIASGIYLLAAVRGEQWTPIEPK-PRER 141
The following BLAST results are available for this feature:
BLAST of TCONS_00060994-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CY24A3.364e-3343.15Cytochrome b-245 light chain OS=Homo sapiens GN=CY... [more]
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