Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00060375-protein ID=TCONS_00060375-protein|Name=TCONS_00060375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=871bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00060375-protein vs. Swiss-Prot (Human)
Match: ABCA1 (ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1 PE=1 SV=3) HSP 1 Score: 495.352 bits (1274), Expect = 1.278e-152 Identity = 284/719 (39.50%), Postives = 412/719 (57.30%), Query Frame = 0 Query: 159 ARVWFTRSSWHGMPSALSAGSNIMLKLY----TNDSAYGIQTSNHPL--PKNALEKSSASSSSGTLNLANFLAMAASFIAASFITFLVQEKTSKAKHIQFVSGVSSVCYWLATFCWDFINYLVPAIIIFILFAAFNLDEF--NGELGAIFIVLILFACAMLPFVYMMSFVFTSSLIAYSVVALILLVISLAMVIAVFILDA---TQEYDIADALHHVFLLLPSYALPKAVMDIGLNKQRRDSCNIDASAKRECVRF--NLKYRDDTFDMEGPGIGTHCLFMFLECIVYFLIVILIEEGFFLGKCFGGGRSTTFSVNAR------EDMDVQEERKKIHNMAQENIKNSALVVKNLTKVYRSSGMMAVDHLCFEVPKKECFGLLGVNGAGKTTTFGMLTGELGITDGTAFLDGFNIQSHLKDVQQRLGYCPQFDALIEKMTGREMLRMFARLRGCPPHKLENVVDEAIAQLNLGKWADKMCGDYSGGNKRKLSTAIALVGDPPIVFLDEPTSGMDPASRRFLWNTLSGVLNSGRSIVLTSHSMEECEALCTRLVIMVNGQLKCIGSIQHLKSRYGQGYTLMMKIGSSNPQQQQAQNDTIYDGPKAEHQNGVTNQAYSGDNVDKLQPPQNNPLHRVPSAQTIADNTTKAMTFIQETFPGAYLIEQRQGYVQYQIYNPELRWSQIFGALEERVRDFGVVDYSVSQTSLEQVFINFAKEQHAED 858 +VWF WH + S L+ +N +L+ N S YGI NHPL K L + + ++S + ++ + A SF+ ASF+ FL+QE+ SKAKH+QF+SGV V YWL+ F WD NY+VPA ++ I+F F + + L + ++L+L+ ++ P +Y SFVF AY V+ + L I + +A F+L+ + +I D L VFL+ P + L + ++D+ N+ D+ RF N ++D+ +G + M +E +V+FLI +LI+ FF+ VNA+ ED DV+ ER++I + +N L +K LTK+YR AVD +C +P ECFGLLGVNGAGK++TF MLTG+ +T G AFL+ +I S++ +V Q +GYCPQFDA+ E +TGRE + FA LRG P ++ V + AI +L L K+ +K G+YSGGNKRKLSTA+AL+G PP+VFLDEPT+GMDP +RRFLWN V+ GRS+VLTSHSMEECEALCTR+ IMVNG+ +C+GS+QHLK+R+G GYT++++I SNP L+P Q+ F FPG+ L E+ + +QYQ+ + ++IF L + + + DYSVSQT+L+QVF+NFAK+Q +D Sbjct: 1590 VKVWFNNKGWHAISSFLNVINNAILRANLQKGENPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALE----------RFGENRFVSPLSWDL----VGRNLFAMAVEGVVFFLITVLIQYRFFI---------RPRPVNAKLSPLNDEDEDVRRERQRILDGGGQN---DILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPD---------------------------------LKPVQD---------------------FFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDD 2228 HSP 2 Score: 206.068 bits (523), Expect = 1.583e-54 Identity = 173/649 (26.66%), Postives = 304/649 (46.84%), Query Frame = 0 Query: 223 FLAMAASFIAASFITFLVQEKTSKAKHIQFVSGVSSVCYWLATFCWDFINYLVPAIIIFILFAAFNLDEFNGELGAIFIVLILFACAMLPFVYMMSFVFTSSLIAYSVVALILLVISLAMVIAVFILDATQEYDIADALHHVFLLLPSYALPKAVMDIGLNKQRRDSCNIDASAKRECVRFNLKYRDDTFDMEGPGIGTHCLFMFLECIVYFLIVILIEEGFFLGKC-------FGGGRSTTFSVNAREDMDVQEERKKIHNMAQENIKNS---ALVVKNLTKVYRSSGMMAVDHLCFEVPKKECFGLLGVNGAGKTTTFGMLTGELGITDGTAFLDGFNIQSHLKDVQQRLGYCPQFDALIEKMTGREMLRMFARLRGCPPHKLENVVDEAIAQLNLGKWADKM---CGDYSGGNKRKLSTAIALVGDPPIVFLDEPTSGMDPASRRFLWNTLSGVLNSGRSIVLTSHSMEECEALCTRLVIMVNGQLKCIGSIQHLKSRYGQGY--TLMMKIGSSNPQQQQAQNDTIYDGPKAEHQNGVTNQAYSGDNVDKLQPPQNNPLHRVPSAQTIADNTTKAMTFIQETFPGAYLIE---QRQGYVQYQIYNPELRWSQIFGALEERVRDFGVVDYSVSQTSLEQVFINFAKE 853 F+ +A + A I +V EK ++ K + G+ + W + F I LV A ++ ++ NL ++ + +F+ L +FA + +++S +F+ + +A + +I + L V+ V A Q+Y + L LL A L +++ D F +D F++ T M + +Y ++ IE F G+ F +S F + E +K+I + E + ++NL KVYR +AVD L + + LG NGAGKTTT +LTG T GTA++ G +I+S + ++Q LG CPQ + L + +T E + +ARL+G ++ +++ L++G + K+ SGG +RKLS A+A VG +V LDEPT+G+DP SRR +W L GR+I+L++H M+E + L R+ I+ +G+L C+GS LK++ G GY TL+ K S+ + + T+ K + + ++ A G + + + T+ + + I++ A L+E YV E + ++F +++R+ D G+ Y +S+T+LE++F+ A+E Sbjct: 643 FMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYS-DPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCV----AWQDY-VGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDN-------LFESPVEEDGFNLT-----TSVSMMLFDTFLYGVMTWYIE-AVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSNQKRISEICMEEEPTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQ--MALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLK-YRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHE---------------SDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEE 1254 The following BLAST results are available for this feature:
BLAST of TCONS_00060375-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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