TCONS_00060232-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060232-protein
Unique NameTCONS_00060232-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length630

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060232-protein ID=TCONS_00060232-protein|Name=TCONS_00060232-protein|organism=Clytia hemisphaerica|type=polypeptide|length=630bp
MDDQHGATTIYNEKKYSTFRKNELVFNDVNVMIPLKIKGQKTSKQILSDC
SGIMKSGLNAILGPTGSGKTTLLDVLAGRKDKSQYSGNVLINGSFQKRDF
RLESGFVVQEDIVMGTMTVRENLAFSAALRLPKEFTKEERERRVNQTIQD
LGLFRCAETRVGTDETRGVSGGERRRTSIGMELITQPQFLFLDEPTTGLD
ASTASSVMMLLKRQCEKGRTIIFSIHQPRYSVFKQFDTLTLLSAGEMVYH
GDPNNAITYFKDLGYPCETYNNPADHFLDIIAGNEKEQRDAVNLNKNGQE
IIAAPSFASQYKTSLIKAETDRSIYPSVEEAKFNQSHSADTAQVTYNSSF
LKQLLCVSHRTSINVLRDPRTFASQVFTNIFMGLLIGAIYYNLDLGINTG
LVNRSGVFFLVTTNMVFSNMSAVAVFLLERRIFRHESANGYYRCSAFFIS
KVICDVIPLRLIPILLFSCISYFLVGFQKDVVKFFVFVLTLLLISLAAAA
VCLMVSSSVSNIAIANLLVSLPFVLMMIFSGFLNNLSSIPVWLRWIKYIS
IFKYGFSSLLLNEMEGLTFTNCTSNTPETLPCMTETGYQYLEKVGIETDW
QWWNQLALGGITVAFLLLTYVQLRRMKKFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037893XLOC_037893Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060232TCONS_00060232Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR013525ABC_2_trans
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 55..254
e-value: 1.0E-8
score: 45.0
NoneNo IPR availableGENE3D3.40.50.300coord: 13..270
e-value: 3.8E-51
score: 173.4
NoneNo IPR availableCDDcd03213ABCG_EPDRcoord: 23..251
e-value: 2.39173E-79
score: 250.931
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 57..196
e-value: 1.1E-21
score: 77.7
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 24..269
score: 17.587
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 353..563
e-value: 8.5E-41
score: 139.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 43..268

Blast
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BLAST of TCONS_00060232-protein vs. Swiss-Prot (Human)
Match: ABCG2 (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 558.525 bits (1438), Expect = 0.000e+0
Identity = 287/607 (47.28%), Postives = 413/607 (68.04%), Query Frame = 0 
Query:   40 QKTSKQILSDCSGIMKSGLNAILGPTGSGKTTLLDVLAGRKDKSQYSGNVLINGSFQKRDFRLESGFVVQEDIVMGTMTVRENLAFSAALRLPKEFTKEERERRVNQTIQDLGLFRCAETRVGTDETRGVSGGERRRTSIGMELITQPQFLFLDEPTTGLDASTASSVMMLLKRQCEKGRTIIFSIHQPRYSVFKQFDTLTLLSAGEMVYHGDPNNAITYFKDLGYPCETYNNPADHFLDIIAGNEKEQRDAVNLNK----NGQEIIAAPSFASQYKTSLIKAETDRSIYPSVEEAKFNQSHSADT-------AQVTYNSSFLKQLLCVSHRTSINVLRDPRTFASQVFTNIFMGLLIGAIYYNLDLGINTGLVNRSGVFFLVTTNMVFSNMSAVAVFLLERRIFRHESANGYYRCSAFFISKVICDVIPLRLIPILLFSCISYFLVGFQKDVVKFFVFVLTLLLISLAAAAVCLMVSSSVSNIAIANLLVSLPFVLMMIFSGFLNNLSSIPVWLRWIKYISIFKYGFSSLLLNEMEGLTFT---NCTSNTPETLPCMTETGYQYLEKVGIE-TDWQWW-NQLALGGITVAFLLLTYVQLRRMKKFS 630
            +   K+ILS+ +GIMK GLNAILGPTG GK++LLDVLA RKD S  SG+VLING+ +  +F+  SG+VVQ+D+VMGT+TVRENL FSAALRL    T  E+  R+N+ IQ+LGL + A+++VGT   RGVSGGER+RTSIGMELIT P  LFLDEPTTGLD+STA++V++LLKR  ++GRTIIFSIHQPRYS+FK FD+LTLL++G +++HG    A+ YF+  GY CE YNNPAD FLDII G+      AV LN+       EII            L +   + S Y    +A+ +Q    +         +++Y +SF  QL  VS R+  N+L +P+   +Q+   + +GL+IGAIY+ L    +TG+ NR+GV F +TTN  FS++SAV +F++E+++F HE  +GYYR S++F+ K++ D++P+R++P ++F+CI YF++G +     FFV + TL++++ +A+++ L +++  S +++A LL+++ FV MMIFSG L NL++I  WL W++Y SI +YGF++L  NE  G  F    N T N P      T TG +YL K GI+ + W  W N +AL  + V FL + Y++L  +KK+S
Sbjct:   57 KPVEKEILSNINGIMKPGLNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDST----AVALNREEDFKATEIIEPSKQDKPLIEKLAEIYVNSSFYKET-KAELHQLSGGEKKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQIIVTVVLGLVIGAIYFGLK-NDSTGIQNRAGVLFFLTTNQCFSSVSAVELFVVEKKLFIHEYISGYYRVSSYFLGKLLSDLLPMRMLPSIIFTCIVYFMLGLKPKADAFFVMMFTLMMVAYSASSMALAIAAGQSVVSVATLLMTICFVFMMIFSGLLVNLTTIASWLSWLQYFSIPRYGFTALQHNEFLGQNFCPGLNATGNNPCNYA--TCTGEEYLVKQGIDLSPWGLWKNHVALACMIVIFLTIAYLKLLFLKKYS 655
The following BLAST results are available for this feature:
BLAST of TCONS_00060232-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCG20.000e+047.28ATP-binding cassette sub-family G member 2 OS=Homo... [more]
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