TCONS_00059189-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059189-protein
Unique Name	TCONS_00059189-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	435

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059189-protein ID=TCONS_00059189-protein|Name=TCONS_00059189-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
MKGKEAHHMRRIIAEDPEWNLATVPNLADICLKHIVSNFGEKPLLNELIQ
QDRNHVLKNLPVNIPLSTTANLITDEDYWRRCCTARWKICDVSCYAQSWR
RMFFEKNLQECIEKFVPGTTDPKQLEDLLLLSGKFIHCLKINNLLPPIKE
PQKTGDDDFSDSESETGEEVNMDHFDFTTAVPHLPNLEELHLCYGVRDCG
MNFEWDLFEFTNRDCSMLAKAVKDCKKIKLFHLHKSKVNDEKARVLISHM
LDHPSLTTLDLSYNKLSNSSARALGKLLNNRSILSHLALVDNNIGPQGAA
AIAHALGKNTTLKTLNLRLNRLEDEGCQSILRVLLKNNTLEEIHLGSNNI
THKSTPLLAQVLVYNKSVKNMNLSCNKFNEEGGKTIQEGMEDNGTIVQMD
MRMTDIGQECEYSISQLLKKNREAIRRKNERAAST

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037274	XLOC_037274	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059189	TCONS_00059189	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00368	LRR_RI_2	coord: 337..364 e-value: 14.0 score: 9.0 coord: 281..308 e-value: 9.5 score: 10.3 coord: 253..280 e-value: 0.045 score: 22.9 coord: 309..336 e-value: 0.058 score: 22.5 coord: 365..392 e-value: 0.16 score: 21.1
None	No IPR available	GENE3D	3.40.50.2000		coord: 198..276 e-value: 7.5E-11 score: 41.6 coord: 277..339 e-value: 7.0E-18 score: 64.6 coord: 340..428 e-value: 6.0E-13 score: 48.4
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 178..426
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 284..303 e-value: 0.29 score: 11.2 coord: 308..330 e-value: 6.5E-5 score: 22.6 coord: 253..274 e-value: 0.0018 score: 18.1

Blast

[Close]

BLAST of TCONS_00059189-protein vs. Swiss-Prot (Human)
Match: TCTE1 (T-complex-associated testis-expressed protein 1 OS=Homo sapiens GN=TCTE1 PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 2.505e-139
Identity = 198/421 (47.03%), Postives = 281/421 (66.75%), Query Frame = 0

Query:    9 MRRIIAEDPEWNLATVPNLADICLKHIVSNFGEKPLLNELIQQDRNHVLKNLPVNIPLSTTANLITDEDYWRRCCTARWKICDVSCYAQSWRRMFFEKNLQECIEKFVPGTTDPKQLEDLLLLSGKFIHCLKINNLLPPIKEPQKTGDDDFSDSESETG-EEVNMDHFDFTTAVPHLPNLEELHLCYGVRDCGMNFEWDLFEFTNRDCSMLAKAVKDCKKIKLFHLHKSKVNDEKARVLISHMLDHPSLTTLDLSYNKLSNSSARALGKLLNNRSILSHLALVDNNIGPQGAAAIAHALGKNTTLKTLNLRLNRLEDEGCQSILRVLLKNNTLEEIHLGSNNITHKSTPLLAQVLVYNKSVKNMNLSCNKFNEEGGKTIQEGMEDNGTIVQMDMRMTDIGQECEYSISQLLKKNREAIRRK 428
            MRRIIAEDPEW+LA VP L ++C++HI+ NF + P+L +++ + +  VL +L  ++PL+ TANLI  E+YW RCC  RW +C V+ +  SW+RMFFE++L+  ++ F+PGTTDP  + DLL L   ++  + ++  LPP++ P +    D SDS SE   EE  +DH+     V  L +LEEL L Y V+DCGMNFEW+LF FT RDC  LA A+K C  +K+F L +SKV+D+KAR++I  +LDHP L  LDLS N + +  AR   KLL++ S L  L L +N +   GA ++AHAL  NT L +LNLRLN +EDEG Q++   L  N  L  +HLG N ++  +  LL+QVL  N ++ ++NLSCN    +GGK + EGM DN T+++ D+R++D+ QE EY I Q L  NREA R++
Sbjct:   61 MRRIIAEDPEWSLAIVPLLTELCIQHIIRNFQKNPILKQMLPEHQQKVLNHLSPDLPLAVTANLIDSENYWLRCCMHRWPVCHVAHHGGSWKRMFFERHLENLLKHFIPGTTDPAVILDLLPLCRNYVRRVHVDQFLPPVQLPAQLRPGDQSDSGSEGEMEEPTVDHYQLGDLVAGLSHLEELDLVYDVKDCGMNFEWNLFLFTYRDCLSLAAAIKACHTLKIFKLTRSKVDDDKARIIIRSLLDHPVLEELDLSQNLIGDRGARGAAKLLSH-SRLRVLNLANNQVRAPGAQSLAHALAHNTNLISLNLRLNCIEDEGGQALAHALQTNKCLTTLHLGGNELSEPTATLLSQVLAINTTLTSINLSCNHIGLDGGKQLLEGMSDNKTLLEFDLRLSDVAQESEYLIGQALYANREAARQR 480

The following BLAST results are available for this feature:

BLAST of TCONS_00059189-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059189-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TCTE1	2.505e-139	47.03	T-complex-associated testis-expressed protein 1 OS...	[more]

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TCONS_00059189-protein (polypeptide) - C. hemisphaerica