TCONS_00058526-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058526-protein
Unique NameTCONS_00058526-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length446

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058526-protein ID=TCONS_00058526-protein|Name=TCONS_00058526-protein|organism=Clytia hemisphaerica|type=polypeptide|length=446bp
MAENVIKQQIPSLKNETKEENDKEFELTAEMMIDEEDYEGTIDEEEDMDD
EDDDEDELADLQKEGDMPIEQLLAMYYQNGDQEAATTEPTTQPTVKTEQS
DEGTAIENTNNGDVGENQMNGNIDESDDPFQNQRITRGLAALNSQYFDED
YSSDEDYQPTDPPIDDWKKEIQIGDNYQAEVDEGLTVYSKGEKTLDAGDK
LLWTPSVISAEKLTSYLDLVYKLSEFGSQRSDRDDEQALFTLLQTRDVSA
ALKKRQEQDRQPPDVSLWSEEECQNFEQGLRVFGKDFRLIQKNKVQTRTV
GEIVQFYYLWKKTERHDAFVTQTKLGRRKYTLPGIADMMGRFMEESDPLF
TNQPISPTGDENHSTTHSNHYSNHTTIQDGAQSYNNTNNLNNVQIKTEQH
LTDYQHQKENQYGRSSYTPNYAQSVPQSRAADESWRTTQSPISMTN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036869XLOC_036869Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058526TCONS_00058526Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000949ELM2_dom
IPR001005SANT/Myb
IPR017884SANT_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000949ELM2 domainSMARTSM01189ELM2_2coord: 171..224
e-value: 4.7E-6
score: 36.1
IPR000949ELM2 domainPFAMPF01448ELM2coord: 171..219
e-value: 3.9E-5
score: 24.2
IPR000949ELM2 domainPROSITEPS51156ELM2coord: 169..260
score: 11.693
IPR001005SANT/Myb domainSMARTSM00717santcoord: 264..313
e-value: 5.8E-7
score: 39.1
NoneNo IPR availableGENE3D1.10.10.60coord: 243..317
e-value: 1.3E-12
score: 47.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..388
NoneNo IPR availableCDDcd11661SANT_MTA3_likecoord: 268..312
e-value: 1.38403E-21
score: 86.5142
IPR017884SANT domainPROSITEPS51293SANTcoord: 263..315
score: 18.691
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 266..317

Blast
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BLAST of TCONS_00058526-protein vs. Swiss-Prot (Human)
Match: MIER1 (Mesoderm induction early response protein 1 OS=Homo sapiens GN=MIER1 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 3.032e-58
Identity = 148/420 (35.24%), Postives = 233/420 (55.48%), Query Frame = 0 
Query:    1 MAENVIKQQIPSLKNETKEENDKEFELTAEMMIDEEDYEGTIDEEEDMDDEDDDEDELADLQKEGDMPIEQLLAMYYQNGDQEAATTEPTTQPTVKTEQSDEGTAIENTNNGDVGENQ------MNGNIDES----DDPFQN------QRITRGLAALNSQYFDEDYSSDEDYQPTDP--PIDDWKKEIQIGDNYQAEVDEGLTVYSKGEKTLDAGDKLLWTPSVISAEKLTSYLDLVYKLS--EFGSQ-----RSDRDDEQALFTLLQTR-DVSAALKK-RQEQDRQPPDVSLWSEEECQNFEQGLRVFGKDFRLIQKNKVQTRTVGEIVQFYYLWKKTERHDAFVTQTKLGRRKYTL-PGIADMMGRFMEESDPLFTNQPISPTGDENHSTTHSNHYSNHTTIQDGAQSYNNTNNLNN 392
            MAE  ++   P     +   +D EF+ +A+M++ + D E T++EEE M+ E +   E+ DL +EGDMPI +LL++Y   G       E   +   + E  D+  A  + N+G  GEN+       +G  DE+    DDP Q+      Q I R       +YFD +   +E+ +  +   P +DWKKEI +G  +QAE+  G+  Y + EK  +  D+LLW P  +  +K+  +L    + +  E G +        +D+EQAL+ L++   D   AL++ R        ++S+W+EEEC+NFEQGL+ +GKDF LIQ NKV+TR+VGE V FYY+WKK+ER+D F  QT+ G++KY L PG+ D M R ++ES+   +++  SP        T SN  ++ +  +DG  S  N N +++
Sbjct:    1 MAEPSVESSSPG---GSATSDDHEFDPSADMLVHDFDDERTLEEEEMMEGETNFSSEIEDLAREGDMPIHELLSLY-GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIR---PRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPP------PTASNSSNSQSEKEDGTVSTANQNGVSS 407
The following BLAST results are available for this feature:
BLAST of TCONS_00058526-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MIER13.032e-5835.24Mesoderm induction early response protein 1 OS=Hom... [more]
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