TCONS_00058448-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058448-protein
Unique NameTCONS_00058448-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length479

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058448-protein ID=TCONS_00058448-protein|Name=TCONS_00058448-protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
MVRNTRQNLEDEKKNGDSDFQWIGEGCKVKRMWQYRSCRVNGIVVTLNDN
VLIKQGDDDDDEDKQPALGQLLELYESIGNDPNRAKVRWYFYHHEMPKSF
RSLVEPEEQEVYTSLDDSHGGVEDIDAETIIGNCNVHKCFDKELPKCIGE
SDFFTRYCFGAGLGIKCFKEERTPKGPTKISKSSKSEPPKARRSLMPNRK
PLEALENNPLNGSPKRKGSDSVYKECSAPPDKVKKRNKSSVSTPSSQAMH
RRFSTQQAVNKLLDSDDEDLGSLSDSSKSSISTQSSVKSNASSRSNASSK
SSKRSKKTQSVTTTKIKNKEENIRTENSTVATRRKSCMPAFEAKQPPAVA
RVTRSAIKLQPTPKSTSKQTKKHNKNLTSHEVMVKIEQMNLVDEKSRLDS
DVFDFDNEEQEDKAPISYVTRSGRKAKTTNPNVSKRELSTRSHIKEDDDD
FVNESESGESSGEEAEIESESDGDVSNSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036830XLOC_036830Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058448TCONS_00058448Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001025BAH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003682 chromatin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001025Bromo adjacent homology (BAH) domainPFAMPF01426BAHcoord: 46..143
e-value: 3.5E-7
score: 30.0
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 43..170
score: 12.469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..382

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058448-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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