TCONS_00055195-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055195-protein
Unique NameTCONS_00055195-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length324

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055195-protein ID=TCONS_00055195-protein|Name=TCONS_00055195-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
LWQRMRSSTRYDICVQILSLFFLLVCCRVIFLQLPSSSCIQDRRSQFLNE
IFSYDRIGNGIKRRDAFIAGKISYERKAPLLIGIPTVYRFYKNKTTFYLD
RTIKSLIKPLSKEDKRQVNILVVLADTEENKKRFIYQKLNDLFPNEIRSG
LIGIIGIPKRFYLPLHDLTPTFNDTSERMYWRSKQSLDYAFIFQYVQNLC
DYYLQIEDDVLANDQYFDTIMEDINRLNNARNKEPVIFKGEKETRLKHKP
WVISEYYKMGFIGRLIPAHYLDVFAGFFKVFYNELPVDWGYPYMLDIMDP
GFSEHRLHVSLFTHIGKISSSIGT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034765XLOC_034765Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055195TCONS_00055195Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006759Glyco_transf_54
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016758transferase activity, transferring hexosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006759Glycosyl transferase family 54PFAMPF04666Glyco_transf_54coord: 76..297
e-value: 2.1E-52
score: 177.7

Blast
[Close]
BLAST of TCONS_00055195-protein vs. Swiss-Prot (Human)
Match: MGT4A (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT4A PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.022e-34
Identity = 87/257 (33.85%), Postives = 132/257 (51.36%), Query Frame = 0 
Query:   80 LLIGIPTVYRFYKNKTTFYLDRTIKSLIKPLSKEDKRQVNILVVLADTEENKKRFIYQKLNDLFPNEIRSGLIGIIGIPKRFYLPLHDLTPTFNDTSERMYWRSKQSLDYAFIFQYVQNLCDYYLQIEDDVLANDQYFDTIMEDINRLNNARNKEPVIFKGEKETRLKHKPWVISEYYKMGFIGRLIPAHYLDVFAGFFKVFYNELPVDWGYPYML--DIMDPGF-SEH----------RLHVSLFTHIGKISSSIG 323
            +++GIPTV R  K+    YL  T+ SLI  L  E+K    I+V + +T+ +    +   L   F  EI SGL+ +I  P+ +Y  L +L  TF D+ ER+ WR+KQ+LDY F+  Y Q    YY+Q+EDD++    YF+TI       N A              +L  + W+I E+ ++GFIG++  A  L +   F  +FY E P+DW   ++L   + +P   ++H          R   SLF H+G  SS  G
Sbjct:  137 IVMGIPTVKREVKS----YLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIK------NFA-------------LQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSG 370
The following BLAST results are available for this feature:
BLAST of TCONS_00055195-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGT4A9.022e-3433.85Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu... [more]
back to top