TCONS_00054994-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054994-protein
Unique NameTCONS_00054994-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1065

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054994-protein ID=TCONS_00054994-protein|Name=TCONS_00054994-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1065bp
MTGSTINKRLNPKMESIQPVTHCPKLDLKTKALEDQNMKKRGRKRKRITC
SSSRRAKKSKIEPLIITTEKCCFCLMGPDKEKGTFFQDQNSNIAAHQFCL
LFSAGLPQAGEDNEGFEGFLVADILKEVQRVSKLICKFCGRNGANLGCCV
QHCRSIYHFNCGYKEGLQFQFCGSFDTYCHVHRSHQDLSLVRTKPKHQFC
PICLENFSSVPLVSSETVLKTPCCNNVFVHKECVQRQASVAGYFFRCPCC
NNKDEFGDEMAKYGIYIPSRDAAWEESNAYNDLLQEYDKCDFNNCSCTRG
RKYSTQAGKWHLLRCYLCGQSAVHVKCLGRCYIPGIGYVCATCNKVAKLN
KENIETVQQQSYTERLKEHKRRLNLLKSRNDPVLLASEVFSKEILRKKFN
IVNDCKVRLRRLDINIKSRKMKLSTALKFLQTPNENKTHLVTTKSVLAPV
RKSPRKSPLKSLIQVQPKKLGVNTNYMFRDRGSRGENMWLESQSDLSEIN
STTLKTNNENRTHKVISNEDDDCHSVIDPNNNQFVNKNLEKEELDNESPK
GSTADTQDRENIVESLKQTELSRKIDVGDWRAVVSHLQERRNGNCGTDCN
ELQVEQSKLVFPEVEEITSNIKLAERLKSVAVKHQETANYFRPRESKVES
DVSTITGKFDSQMMRTLKSKDAIVSDEKVNESFQEKIKLIPPISKIAPTS
TKDAKQPKKSKTSIAEESKHVLKSIKSEILSPRNRENQNIETRPSSTLSK
NTNTTIKSIQQQYLSPRAIPTIHTTIRSGAVPTMRLKPQSPFKVVWSPNM
KVSLDDFLNSPQTPGRCFLGFDMDLKPIYCDKCNFCVTPKTSTKQAKLTS
TKSISTLSELSESKLVADSKTKTSITQNVPYASVTKNAFTPRVTRASSIR
SKQIMTESPLTPDCCFLGFDSELKPVFCKECKIASPSARTTGPCSKQRNF
LTPMKTDFADSKFGGFINKENLMTSRKQLYRPDERKYIPVPCLDIKQLIG
KNPDDEKYTKIWTPYQDCSQLFRPYSYRDAKVGCGSDTRSNDIAMALLEE
AFENDDELVIAVESG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034653XLOC_034653Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054994TCONS_00054994Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR034732EPHD
IPR001841Znf_RING
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 359..379
NoneNo IPR availablePFAMPF13771zf-HC5HC2Hcoord: 96..183
e-value: 3.2E-14
score: 52.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..717
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..560
NoneNo IPR availableCDDcd15669ePHD_PHF7_G2E3_likecoord: 71..182
e-value: 3.97216E-42
score: 150.093
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 176..256
e-value: 1.5E-8
score: 34.3
coord: 269..350
e-value: 5.3E-16
score: 58.2
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 295..343
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 68..183
score: 23.578
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 200..251
score: 9.081
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 268..347

Blast
[Close]
BLAST of TCONS_00054994-protein vs. Swiss-Prot (Human)
Match: G2E3 (G2/M phase-specific E3 ubiquitin-protein ligase OS=Homo sapiens GN=G2E3 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 3.452e-61
Identity = 107/238 (44.96%), Postives = 144/238 (60.50%), Query Frame = 0 
Query:   92 NIAAHQFCLLFSAGLPQAGEDNEGFEGFLVADILKEVQRVSKLICKFCGRNGANLGCCVQHCRSIYHFNCGYKEGLQFQFCGSFDTYCHVHRSHQDLSLVRTKPKHQFCPICLENFSSVPLVSSETVLKTPCCNNVFVHKECVQRQASVAG-YFFRCPCCNNKDEFGDEMAKYGIYIPSRDAAWE-ESNAYNDLLQEYDKCDFNNCSCTRGRKYSTQAGKWHLLRCYLCGQSAVHVKC 327
            N+  H +CLL S+G+ Q G++ EG  GFL+ DI KEV R SKL C  C +NGA++GC    C+  YHF CG +    FQF G+F ++C  HR  Q ++    +     C ICLE    +P   S  +L++PCC N + H++C+Q QA  AG +FFRC  CNN D F  EM + GI+IP +DA+WE E NAY +LLQ Y++CD   C C  GR Y+    KW + RC  CG S  H+ C
Sbjct:   37 NLTVHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSNNYRESLP-CTICLEFIEPIP---SYNILRSPCCKNAWFHRDCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIKRCQCCGSSGTHLAC 270
The following BLAST results are available for this feature:
BLAST of TCONS_00054994-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G2E33.452e-6144.96G2/M phase-specific E3 ubiquitin-protein ligase OS... [more]
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