TCONS_00053810-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053810-protein
Unique NameTCONS_00053810-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length295

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053810-protein ID=TCONS_00053810-protein|Name=TCONS_00053810-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
RKLKRSVGNTEPSKATSLKLYVTMSTNSKATTTSILILTIAILGLIAPTF
SYEYIPPERTIRLNIGEHATIQCTDFTPNIRDLYWEKANDQYYVQQDICP
ITDCVAFSLKKPSQNQTILHVTPFTDDDYGSYICRRKMNNTRNGYAIIID
TLEIELIPKNENEQDNRTNCQNDAIVASDPRSVSHKPECTSDGRYELVQT
MMYSGARLFWCVNQDYGTKTHKHFFNKLDDLPCVKKRVGVTFHTAMIVIG
CIQGLFTLLDIFLGFAYGTGFFILIIRGFMFVIMSPMKATMRRGN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033958XLOC_033958Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053810TCONS_00053810Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR000716Thyroglobulin_1
IPR013151Immunoglobulin
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 287..295
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 50..161
e-value: 3.9E-5
score: 23.0
IPR000716Thyroglobulin type-1PFAMPF00086Thyroglobulin_1coord: 170..220
e-value: 6.5E-6
score: 25.6
IPR000716Thyroglobulin type-1GENE3D4.10.800.10coord: 162..225
e-value: 1.1E-5
score: 24.8
IPR000716Thyroglobulin type-1SUPERFAMILY57610Thyroglobulin type-1 domaincoord: 179..223
IPR013151ImmunoglobulinPFAMPF00047igcoord: 58..135
e-value: 2.3E-5
score: 24.4
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 48..135
score: 7.522
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 57..135

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053810-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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