TCONS_00047726-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047726-protein
Unique Name	TCONS_00047726-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	636

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047726-protein ID=TCONS_00047726-protein|Name=TCONS_00047726-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
MENLKRYKRLLILVLTPILLSPMVIAIDEPEMRCAYGIAIMAVFWVTEVT
PLAVTSLLPLIIFPFLGLLPAKVVCMQYMKDTNILLLGGLLIALAIERWN
VHKRVALLVLLMVGTQPRRLMLGFMVTTAFISMWITNTATTAMMTPIMEA
VLKQLDKKFHKDGGEEKDEKEQLEADEEAAASNGNATQQLIPTYHTKPHQ
KKYVIDNGNSIQHEEETMRYNVKEGTVSNSDTMTKLVINSKDNEEYERHR
QLCKAMLLCICYSANIGGTGTLTGTAPQLVLAGQVDDVFPKAPSVSFIFW
FVYAFPQMLIFLLIAWIYLQAMFLGIGLRHFSFLKRMCGKGAPKSDKGKE
MYDVMKKQYDDLGPVSYAEITVLINFLMLVLLWFFREPKFMPGWGELFKA
KYISDGTAAIIIGFLLFQLPSQTPEIFAKGRPKKKLPSKTILEWKYVSEK
FPWNVLFLLGAGFALATACKESGLSLYLSCQLSSLKSIPESALVFIICTM
LTFLTEITSNTATATILLPILASLGQSIGVNPLYMMVPATVCASFAFMLP
VATPPNAIVFGTGRLTVADMAKAGFGMNIIGILLVTLSINTWGYEYYDLG
TFPEWARASESMKDACYPNATIAMGNSTLANSTFFY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030393	XLOC_030393	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047726	TCONS_00047726	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001898	SLC13A/DASS
IPR031312	Na/sul_symport_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006814	sodium ion transport
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001898	Solute carrier family 13	PFAM	PF00939	Na_sulph_symp	coord: 8..594 e-value: 2.9E-110 score: 369.4
None	No IPR available	GENE3D	1.20.1250.20		coord: 32..390 e-value: 0.0045 score: 15.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..188
None	No IPR available	CDD	cd01115	SLC13_permease	coord: 38..593 e-value: 2.69079E-48 score: 173.155
IPR031312	Sodium/sulphate symporter, conserved site	PROSITE	PS01271	NA_SULFATE	coord: 543..559

Blast

[Close]

BLAST of TCONS_00047726-protein vs. Swiss-Prot (Human)
Match: S13A3 (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=1 SV=1)

HSP 1 Score: 506.523 bits (1303), Expect = 2.286e-173
Identity = 267/632 (42.25%), Postives = 384/632 (60.76%), Query Frame = 0

Query:    8 KRLLILVLTPILLSPMVIAIDEPEMRCAYGIAIMAVFWVTEVTPLAVTSLLPLIIFPFLGLLPAKVVCMQYMKDTNILLLGGLLIALAIERWNVHKRVALLVLLMVGTQPRRLMLGFMVTTAFISMWITNTATTAMMTPIMEAVLKQL--DKKFHKDGGEEKDEKEQLEADEEAAASNGNATQQLIPTYHTKPHQKKYVIDNGNSIQHEEETMRYNVKEGTVSNSDTMTKLVINSKDNEEYERHRQLCKAMLLCICYSANIGGTGTLTGTAPQLVLAGQVDDVFPKAPSVSFIFWFVYAFPQMLIFLLIAWIYLQAMFLGIGLRHFSFLKRMCGKGAPKSDKGKEMYDVMKKQYDDLGPVSYAEITVLINFLMLVLLWFFREPKFMPGWGELFKAKYISDGTAAIIIGFLLFQLPSQTPEI---FAKGRPKKKLPSKTILEWKYVSEKFPWNVLFLLGAGFALATACKESGLSLYLSCQLSSLKSIPESALVFIICTMLTFLTEITSNTATATILLPILASLGQSIGVNPLYMMVPATVCASFAFMLPVATPPNAIVFGTGRLTVADMAKAGFGMNIIGILLVTLSINTWGYEYYDLGTFPEWARASESMKDACYPNATIAMGNSTLANSTF 634
            +RLL+L+ TP+ L P+V A+   E RC + I +MAV+W TE  PL+VT+LLP+++FPF+G+LP+  VC QY  DTN L L GL++A AIE WN+H+R+AL +L++VG QP RL+LG MVTT+F+SMW++NTA+TAMM PI  A+LK L   K+  KD  +E +E      +  A   NG          HT P + +++     +  H  ET             +    L  +S+  +EY R+  + K  L+ I YSA+IGGT TLTGTAP L+L GQ+   FP+   V+F  WF++AFP ML+FLL  W+++  ++ G+  R +        K   +++       V++++Y +LGP+ +AE  V I F M  +L F R+PKF+PGW  LF   ++SD    + I  +LF  PSQ P +   F    P  +  ++ +L WK   E  PWN++ LLG GFA+A  C+ESGLS+++  QL  L+++P +  V +I  ++ F TE  SNTAT  I LP+LA L   + V+PLY+M+P TV  SFAFMLPV+TPPN+I F +G L V DM + G  MN++G+LL++L++NTW    + LGTFP+WA        A  P         TLAN TF
Sbjct:   15 RRLLVLLFTPLALLPVVFALPPKEGRCLFVILLMAVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLFGQKEVRKDPSQESEE------NTAAVRRNG---------LHTVPTEMQFLAST-EAKDHPGET-------------EVPLDLPADSRKEDEYRRN--IWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQCDVVNFGSWFIFAFPLMLLFLLAGWLWISFLYGGLSFRGWR-----KNKSEIRTNAEDRARAVIREEYQNLGPIKFAEQAVFILFCMFAILLFTRDPKFIPGWASLFNPGFLSDAVTGVAIVTILFFFPSQRPSLKWWFDFKAPNTE--TEPLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQTIFQLGTFPDWADMYSVNVTALPP---------TLANDTF 599

The following BLAST results are available for this feature:

BLAST of TCONS_00047726-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047726-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S13A3	2.286e-173	42.25	Solute carrier family 13 member 3 OS=Homo sapiens ...	[more]

You are here

TCONS_00047726-protein (polypeptide) - C. hemisphaerica