TCONS_00002759 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002759
Unique NameTCONS_00002759
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length452

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002759 ID=TCONS_00002759|Name=TCONS_00002759|organism=Clytia hemisphaerica|type=transcript|length=452bp
atcatcaatcatcGGATAATTTTACTTGTTAGGCTGAATCTAAAGCTCCT
AAACCTAAGAAAAAACACAAATACCAAGTAAAATCCTATTAATGTGATAA
AGAGATCCCTTACCATTGATATACAACCATTTTTTTCAATCATGctcaaa
atcagcaaaaagaaaCATCGTGTTTACAAAACCTTTATGAACGTGCACGA
CAACATGCCTGCCAGTCCAAACGTGGCGAATGACCAACATTATTTTCATC
GTGAGCTAGATAGATGGCTTTGACTGCTTATTTTATGACGTCAAACCATT
ATCAACAAGCAAACGTGAAGGACTGCAGGAAAAAGGAACCTATCTTATAA
AATGGGTTCCTCCATCACACCTCATCACACAGACACAACACTCTGGGTTT
CATTGTCGTTGGATGTGCACTCAATTATGAAGCCAGAACTTGAACTTACC
TG
Run BLAST on NCBI

transcript from alignment at sc0000021:326852..327303

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002759 ID=TCONS_00002759|Name=TCONS_00002759|organism=Clytia hemisphaerica|type=transcript|length=452bp|location=Sequence derived from alignment at sc0000021:326852..327303 (Clytia hemisphaerica)
CAGGTAAGTTCAAGTTCTGGCTTCATAATTGAGTGCACATCCAACGACAA
TGAAACCCAGAGTGTTGTGTCTGTGTGATGAGGTGTGATGGAGGAACCCA
TTTTATAAGATAGGTTCCTTTTTCCTGCAGTCCTTCACGTTTGCTTGTTG
ATAATGGTTTGACGTCATAAAATAAGCAGTCAAAGCCATCTATCTAGCTC
ACGATGAAAATAATGTTGGTCATTCGCCACGTTTGGACTGGCAGGCATGT
TGTCGTGCACGTTCATAAAGGTTTTGTAAACACGATGtttctttttgctg
attttgagCATGATTGAAAAAAATGGTTGTATATCAATGGTAAGGGATCT
CTTTATCACATTAATAGGATTTTACTTGGTATTTGTGTTTTTTCTTAGGT
TTAGGAGCTTTAGATTCAGCCTAACAAGTAAAATTATCCgatgattgatg
at
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001487XLOC_001487Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002759-exon-sc0000021-1491911889:326852..327303TCONS_00002759-exon-sc0000021-1491911889:326852..327303Clytia hemisphaericaexon
TCONS_00002759-exon-sc0000021-1510915933:326852..327303TCONS_00002759-exon-sc0000021-1510915933:326852..327303Clytia hemisphaericaexon
TCONS_00002759-exon-sc0000021-1575043694:326852..327303TCONS_00002759-exon-sc0000021-1575043694:326852..327303Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:326852..327303 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.31399	1.56609	0.991845	1.45555	1.37821	0	0.375409	0.175727	0.615153	0.457179	0.147916	0.486172	0.388397	1.61342	0.414515	0.978644	0.986408	0.674024	0.3104	0.812029	0.28232	0.413118	1.0044	1.21752	1.09727	1.11918	0.200194	0	0.162047	0.495302
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002759 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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