TCONS_00021011-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021011-protein
Unique NameTCONS_00021011-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length741

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021011-protein ID=TCONS_00021011-protein|Name=TCONS_00021011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=741bp
MATNSIDSSIAVAGTAEDLNNHNVPVNQPDSDSVILRCNQTLKLETAIEI
LNNTDQYKVINKVPENPKGGDTYLLIPAQKDDDAWKNDGYRWCHYGPKLV
PGKSPLVQKRYYAAYMSNGKVSKFHKNVYQLINDDRERIPVVVHYFGDHS
IAATRDTKGKDVKGFENGAGGNVSNEHQYSKFDGTDKKLTVHRAVKPKNI
KKCILSKDDFQELHRLSYGLGSYVKLISHYPDLIIVFGMREISDDLENIL
KLNQEPRPLFSYSNSYELGEYIVSTFLYTHPAFLERPTIPSHFVIHEKSC
GLAHQEMCRILSQMVPSLAASSNPVVLNLDPNKFSAVSTVFPNMHTLFSW
KDVIANTKAWLYANGASQQEVTVYIEDLRQLFSRKSKEIYEEALAECKTR
WHGFFEEYYMKEIHEVVNDRLGRWALEKWNVYNPYTGVTDKSNEGMEVVI
RQLKISGNTPVHSTVLSLCLLQRWLHSEIWKSYCGVGPYTVRTEFQPLQR
SVSEFTQPTTPCPPDQILFYIQNKRALIAEGILKEDSTNSELKANLQQTA
TQLVKAGAITMNSKQQTFTIKANPVTYYEVKLFPKISCSCEDMRSGLCAH
VLAVKMSLGINIEDDLRKYQPQRGLKAGETIKAIKKLKRENSMEPVNTIQ
IKRTKDDLTGEELSIQSADIITATESDVEREHETVEAVEVDPNSEEAQQL
LQTTLDEGQXKSILTLRKPNNFCKQPLMKDKYNLCKWLLSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011782XLOC_011782Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021011TCONS_00021011Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005559CG-1_dom
IPR007527Znf_SWIM
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005559CG-1 DNA-binding domainPFAMPF03859CG-1coord: 45..146
e-value: 3.6E-6
score: 26.7
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 578..607
e-value: 5.2E-4
score: 19.5
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 578..609
score: 9.804

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021011-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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