TCONS_00015216-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015216-protein
Unique NameTCONS_00015216-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length281

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015216-protein ID=TCONS_00015216-protein|Name=TCONS_00015216-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MSLLIFFYSLTGKKLKDKMSLESLSRYDDAEDEIKDEDHDLVLQTKKSLE
AIRPPSRPVSDAESIGEQSNKPKSLVSYFGDAYGSSSESENDDSDVNTRT
TVVNLGLHDGQASSLESGSPATIDLDTEGGIRDNLDDVRLPPQPEGRCSK
SLQEKILKMYERKMAGMDVNEYVQKKKNFRNPSIYQKLVSYIGIDEHGTN
FPKHIYDPSIWGPESYYEELAKAQKEYNDKKEKEKNKANNRAKVEFVSGT
KKPPSTAPLATTAGSAVPEKKSKWDQGPGKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008509XLOC_008509Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015216TCONS_00015216Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012479SAP30BP
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 217..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..281
IPR012479SAP30-binding proteinPFAMPF07818HCNGPcoord: 140..233
e-value: 4.6E-32
score: 110.4

Blast
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BLAST of TCONS_00015216-protein vs. Swiss-Prot (Human)
Match: S30BP (SAP30-binding protein OS=Homo sapiens GN=SAP30BP PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.784e-38
Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 0 
Query:  136 DDVRLPPQPEGRCSKSLQEKILKMYERKMA-GMDVNEYVQKKKNFRNPSIYQKLVSYIGIDEHGTNFPKHIYDPSIWGPESYYEELAKAQKEYNDKKEKEKNKANNRAKVEFV 247
            D++++PP+P GRCS  LQ+KI K+YERK+  GMD+N  +Q+KK FRNPSIY+KL+ +  IDE GTN+PK ++DP  W  +SYYE LAKAQK   DK EK K +   R K+EFV
Sbjct:  115 DEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKE---RTKIEFV 224
The following BLAST results are available for this feature:
BLAST of TCONS_00015216-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S30BP2.784e-3856.64SAP30-binding protein OS=Homo sapiens GN=SAP30BP P... [more]
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