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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00011870-protein ID=TCONS_00011870-protein|Name=TCONS_00011870-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1329bp
EITNAYAELFFHLKKADSSKKNLPLVEFVEVNKKFSLALKRQFIDKMAKD
MYPKATAVSLKKSLLGNCDEQDEFQQMLEERWMPKRTRTEKRRDRKSFLA
SPATPIRFSKRGVIKKTEKCRCQICHKAYERELPEFEIRPEDRPTSPLYY
CNDCITDVFQDILNYAMVQSFTKPVTDDDLFTQVLLSFNELSENEKTNYH
SSVILTLQYCKASNHPEFRQAPPITNKGITNLYANCFASSSLQLLLGTCV
NKALPIDDEICNNKLTRYLRYIRDELSNESNSPFPFGNGLDGESAIGEII
NVVCKHDYRTARYVDAEEFMMVLLNKLFHDEQSPFHNIFVEFTRCLSCNH
ILHSLTTLQALRVKVDHNKHQETLTCLLQKTFFHQPLEGRSRDLYPNECC
DNANPLIGRYLGNTPPFLLIMTNRSDNAQMVVRKQVKVEEHIDISKIAGF
KERIQYNLVGSINFIGKDLKHGHYITYLVEKRNMLKIDDNSFQVLEKSIV
LKDPTFQSTTHVLCYVKNTKATEEEFLLDESDWSSMNQILLSTLNPLSSS
ISNADIKRCLVDKANDEIINGFLSFMKNRLPDEITVISSLWYQDVYGNRL
SDLRRRFGHKLALYKDVVLIPVHEHDHWLLIFIKDDIAVVYDPLIQPRVN
WEGIKVVNNETLRYKSQPLEWLQLKGRKQQNLVDCGYLVLAMAWDLCKRK
ESATKIPSPLLRRWIASQCAKVEDAREDIPKYKEPRNWHDHQHGNIPVAE
ISFGSLMKLLDKKDSTKKNSPQTRQSKQFPSQPTSDDAQMKNSTDSPQTR
QSKQFPSQPTSDDAQMKNSTDSPQTRQSKQFPSQPTSDDAQMKNSTDSPQ
TRQSKQFPSQPTSDDAQMKNSTDSPQTRQSKQFPSQPTSNDAQMKNSTDS
QFAHTQKRKLSSQMKNFEELIQNIKRRKSNASDIEEIETTLRRKNQADDS
ISRKTKFETDIISIDENNIQVDSEEVKEKKCTIFEKISSEDGISSDKSTD
TDDSVSDTDIKGSRRKRTFQNDDIFNGNSINYFLDSDSEITFSDSENFNY
HRDFNEDIDVLKPFKDMKDESKLSLLIFWAVNCRILTATIMYGQSRLDEN
EIVQELPDTFRCRDLKRYLPRLEQYFSDEAWASFIGNIENLKARRYKCAK
CNGIMPRNEATLQCDRCFRWVHWTVACSGVARNPDVKNLTFFCHGCKSEV
KSAKDERRHKIAFEIGKHSNATHTDIARDILKRRKSEIEVFINDSSCPIN
NLFLKAIVKGNQSKTLKNLKASESNELVQEYFNLKNKGLKETVRQILFKL
YPTQLTIDGDGPSRMDFVISKLFLNVDEY Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity |
| GO:0008234 | cysteine-type peptidase activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| biological_process |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
| molecular_function |
GO:0008234 |
cysteine-type peptidase activity |
| molecular_function |
GO:0036459 |
thiol-dependent ubiquitinyl hydrolase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 907..934 |
| None | No IPR available | GENE3D | 3.40.395.10 | | coord: 622..724
e-value: 1.9E-4
score: 20.5 |
| None | No IPR available | GENE3D | 3.90.70.10 | | coord: 228..520
e-value: 2.2E-17
score: 62.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 764..913 |
| None | No IPR available | CDD | cd15489 | PHD_SF | coord: 1148..1196
e-value: 1.47331E-5
score: 43.0746 |
| None | No IPR available | CDD | cd02257 | Peptidase_C19 | coord: 315..516
e-value: 7.65549E-11
score: 61.7302 |
| None | No IPR available | SUPERFAMILY | 54001 | Cysteine proteinases | coord: 227..519 |
| None | No IPR available | SUPERFAMILY | 54001 | Cysteine proteinases | coord: 565..700 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1136..1213
e-value: 5.6E-8
score: 31.9 |
| IPR018200 | Ubiquitin specific protease, conserved site | PROSITE | PS00972 | USP_1 | coord: 228..243 |
| IPR028889 | Ubiquitin specific protease domain | PROSITE | PS50235 | USP_3 | coord: 227..518
score: 18.288 |
| IPR003653 | Ulp1 protease family, C-terminal catalytic domain | PROSITE | PS50600 | ULP_PROTEASE | coord: 534..696
score: 9.695 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 1146..1201 |
Blast
The following BLAST results are available for this feature:
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