TCONS_00008129-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008129-protein
Unique NameTCONS_00008129-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008129-protein ID=TCONS_00008129-protein|Name=TCONS_00008129-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MGANTSSLEQDIGPVNEHFFGLINFGNTCYCNSVLQALFFCRPFREKVLA
YKPLSKRKENLLTCLADLFNNIATQKKKTGVIAPKKFVTRLRKENELFDN
YMQQDAHEFLNYLLNTIAEILQGEKQREKEKDRERMGSVSSVSSKTSASS
GYSSATMHSTFKTPPEPTWVHDIFEGTLTNETRCLCCETVSSKDESFLDI
SVDVEQNTSITYCLKNFSCTETLCSEQKYFCETCGSKQEAQKRMMVKKLP
QILALHLKRFKYVEQQQRYTKLSHRVTFPLQLRLFNTSDDAINHDRLYDL
VAVVVHCGSGPNRGHYIAIVKSHGFWLLFDDDIVEKIESHSLEDFFGLTT
DVQKNSECGYILFYESRKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004581XLOC_004581Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008129TCONS_00008129Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 20..364
e-value: 3.2E-60
score: 203.7
NoneNo IPR availableGENE3D3.90.70.10coord: 14..369
e-value: 3.4E-101
score: 337.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..159
NoneNo IPR availableCDDcd02663Peptidase_C19Gcoord: 21..365
e-value: 1.01965E-180
score: 505.692
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 168..365
coord: 18..122
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 21..36
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 298..316
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 20..367
score: 65.667

Blast
[Close]
BLAST of TCONS_00008129-protein vs. Swiss-Prot (Human)
Match: UBP46 (Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46 PE=1 SV=1)

HSP 1 Score: 573.163 bits (1476), Expect = 0.000e+0
Identity = 272/372 (73.12%), Postives = 316/372 (84.95%), Query Frame = 0 
Query:    1 MGANTSSLEQDIGP----VNEHFFGLINFGNTCYCNSVLQALFFCRPFREKVLAYKPLSKRKENLLTCLADLFNNIATQKKKTGVIAPKKFVTRLRKENELFDNYMQQDAHEFLNYLLNTIAEILQGEKQREKEKDRERMGSVSSVSSKTSASSGYSSATMHSTFKTPPEPTWVHDIFEGTLTNETRCLCCETVSSKDESFLDISVDVEQNTSITYCLKNFSCTETLCSEQKYFCETCGSKQEAQKRMMVKKLPQILALHLKRFKYVEQQQRYTKLSHRVTFPLQLRLFNTSDDAINHDRLYDLVAVVVHCGSGPNRGHYIAIVKSHGFWLLFDDDIVEKIESHSLEDFFGLTTDVQKNSECGYILFYESRK 368
            MG N S+LE+DIGP    +NEH+FGL+NFGNTCYCNSVLQAL+FCRPFRE VLAYK   K+KENLLTCLADLF++IATQKKK GVI PKKF++RLRKEN+LFDNYMQQDAHEFLNYLLNTIA+ILQ EK++EK+  + + G+++  +                     PE TWVH+IF+GTLTNETRCL CETVSSKDE FLD+SVDVEQNTSIT+CL++FS TETLCSEQKY+CETC SKQEAQKRM VKKLP ILALHLKRFKY+EQ  RYTKLS+RV FPL+LRLFNTS DA+N DR+YDLVAVVVHCGSGPNRGHYI IVKSHGFWLLFDDDIVEKI++ ++E+F+GLT+D+ KNSE GYILFY+SR+
Sbjct:   12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNK-----------------PELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQSRE 366
The following BLAST results are available for this feature:
BLAST of TCONS_00008129-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP460.000e+073.12Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo s... [more]
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