TCONS_00005364-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005364-protein
Unique NameTCONS_00005364-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length583

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005364-protein ID=TCONS_00005364-protein|Name=TCONS_00005364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=583bp
MPKPKLKKTSKRMTCHKRYKIIKKIKEHNKKVKKEDKNASKRKPKDPGIP
NLYPFKEQLLKQIEERKEKEKEEKEKMKQQRTKEKSRKRKLQDLQKDAEK
RAKLFDQKQEIDEQAKELHRGPLELSRRSYYKEFRKVVEASDVIIQVLDA
RDPLGCRCPQLEEIVMSSGRNKKIVLLLNKVDLVPKEIVQSWLKYLRSEF
PTVAFKASTQNQKQKLTQSKVTIEKASKDLLQSSGCIGAGVLLKLLGNYC
RNQDIKTSITVGVVGFPNVGKSSVINSLKRSKACNVGNTPGVTKNMQEIQ
LDQHVKLLDCPGIVMASGSSDTQIILKNVVKIEALDDPVKPVEAILSRCS
KEQVMQKYLVPDYSDTMEFLTLFAKRLGKLKKGGIPDTLTAAKVLLQDWN
NGKITFYTHPPEREKEKATIAQYWGAGFDIDAIVKAENDDLNGLADSLGA
ALVLQAGKPVDMQTEEQEIEEEEEESEEDEEEEMSGSDEEDDDEVQINNP
QIKESVIALKAKSKKQKVESNKPTKKENSVVLEQDNPQTNTQRKKAFKNK
QKEKRKQGKKALVSDENKMADSDDDNYDVNKMF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003046XLOC_003046Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005364TCONS_00005364Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR014813Gnl3_N_dom
IPR023179GTP-bd_ortho_bundle
IPR030378G_CP_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..484
NoneNo IPR availableCOILSCoilCoilcoord: 53..97
NoneNo IPR availableGENE3D1.20.120.430coord: 123..322
e-value: 1.1E-33
score: 116.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..583
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
NoneNo IPR availableCDDcd04178Nucleostemin_likecoord: 142..313
e-value: 3.49574E-108
score: 323.373
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 307..322
score: 24.35
coord: 261..281
score: 48.11
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 261..330
e-value: 2.5E-15
score: 56.4
IPR014813Guanine nucleotide-binding protein-like 3, N-terminal domainPFAMPF08701GN3L_Grn1coord: 16..86
e-value: 4.5E-19
score: 68.2
IPR023179GTP-binding protein, orthogonal bundle domainGENE3D1.10.1580.10coord: 323..409
e-value: 2.5E-16
score: 59.4
IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainPROSITEPS51721G_CPcoord: 131..316
score: 43.06
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 129..321

Blast
[Close]
BLAST of TCONS_00005364-protein vs. Swiss-Prot (Human)
Match: GNL3L (Guanine nucleotide-binding protein-like 3-like protein OS=Homo sapiens GN=GNL3L PE=1 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 3.042e-122
Identity = 221/569 (38.84%), Postives = 326/569 (57.29%), Query Frame = 0 
Query:   37 KNASKRKPKDPGIPNLYPFKEQLLKQIEERKEKEKEEKEKMKQQRTKEKSRKRKLQDLQKDAEKRAKLFDQKQEIDEQAKELHRGPLELSRRSYYKEFRKVVEASDVIIQVLDARDPLGCRCPQLEEIVMSSGRNKKIVLLLNKVDLVPKEIVQSWLKYLRSEFPTVAFKASTQNQKQKLTQSKVTIEKASKDLLQSSGCIGAGVLLKLLGNYCRNQDIKTSITVGVVGFPNVGKSSVINSLKRSKACNVGNTPGVTKNMQEIQLDQHVKLLDCPGIVMASGSSDTQIILKNVVKIEALDDPVKPVEAILSRCSKEQVMQKYLVPDYSDTMEFLTLFAKRLGKLKKGGIPDTLTAAKVLLQDWNNGKITFYTHPPEREKEKATIAQYWGAGFDIDAIVKAENDDLNGLADSLGAALVLQAGKPVDMQTEEQEIEEEEEESEEDEEEEMSGSDEEDDDEVQINNPQIKESVIALKAKSKKQKV-----ESNKPTK--------------KENSVV--------------LEQDNPQTNTQRKKAFKNKQKEKRKQGKKALVSDENKMADS 572
            +N  K   K P  P+     +   ++ E +K+  +E +EK +  R +E+ ++R ++   +D  +R + F+ K+E+ ++     +   E +R++YYKEFRKVVE SDVI++VLDARDPLGCRC Q+EE V+ +  NKK+VL+LNK+DLVPKE+V+ WL YLR+E PTVAFKASTQ+Q + L +  V +++AS+ LL+S  C GA  L+++LGNYCR  +++T I VGVVG PNVGKSS+INSLKRS+AC+VG  PG+TK MQE+ LD+ ++LLD PGIV    +S+   IL+N V ++ L DPV PVE IL RC+ E++   Y V  +  T  FLT  A RLGK KKGG+     AAK +L DW +GKI+FY  PP      AT                      + L   L A +V +  +  D++  EQ  E+  E     E +E+ G  +  + E+++ +  + +   A++ K+   K+         P +              K NS+V              +E D  Q       A KNK+K +++  K A     +K++DS
Sbjct:   31 QNGKKATSKVPSAPHFVHPNDHANREAELKKKWVEEMREKQQAAREQERQKRRTIESYCQDVLRRQEEFEHKEEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEKWLDYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPGIV-PGPNSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPP------AT----------------------HTLPTHLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPLEMEIKLLHSPMTKIADAIENKTTVYKIGDLTGYCTNPNRHQMGWAKRNVDHRPKSNSMVDVCSVDRRSVLQRIMETDPLQQGQALASALKNKKKMQKRADKIA-----SKLSDS 565
The following BLAST results are available for this feature:
BLAST of TCONS_00005364-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNL3L3.042e-12238.84Guanine nucleotide-binding protein-like 3-like pro... [more]
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