TCONS_00004172-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004172-protein
Unique Name	TCONS_00004172-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	445

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004172-protein ID=TCONS_00004172-protein|Name=TCONS_00004172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MATLKICAQNEYKSSSDEELILKNKKKDSDMFWNERKRWHWTIILFVGSI
LVYCVRTSMSVCVPAIAKEMGWSKQISGMALSAFFFGYLSTNILGGYFAD
RHGGERMIMYSSTIWATLTVVLPYFSTAQTFLNSGTFAILATRFFTGCAQ
GFFYPSLSSLVSKHVKDSDKGFVTGVVFSGCSIGTIATGFFGSIIMEHTS
WRFVFVLIGGFSMLWIYAFRFYYHVDKNSKPKTTVDFSSHKVNTESFPWR
RLLRRASVWAFLVAFFAYGYTFYVLLSWAPAYFHDAFPESKGWIFNVIPW
LASFAVQNIAGYYSNTLMSSGASTTYVRKLYAAMLFLGTGLFSLLLNTVE
SFQQALFVMALTVGVNAFSTSSISLNAQDLSPKHAGALFGFGNSLSALGG
SIGVYLTGWILEHSGRWSYVFLINSAISFFAFIVFQLFGSAEAVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002322	XLOC_002322	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004172	TCONS_00004172	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 243..440 e-value: 2.3E-21 score: 75.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 25..233 e-value: 1.5E-33 score: 115.3
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 45..403 e-value: 4.5E-44 score: 150.7
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 41..443 score: 24.479
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 42..438 e-value: 1.76752E-28 score: 112.792
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 26..438

Blast

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BLAST of TCONS_00004172-protein vs. Swiss-Prot (Human)
Match: S17A9 (Solute carrier family 17 member 9 OS=Homo sapiens GN=SLC17A9 PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 6.618e-93
Identity = 149/423 (35.22%), Postives = 252/423 (59.57%), Query Frame = 0

Query:   24 NKKKDSDMFWNERKRWHWTIILFVGSILVYCVRTSMSVCVPAIAKEMGWSKQISGMALSAFFFGYLSTNILGGYFADRHGGERMIMYSSTIWATLTVVLPYFSTAQTFLNSGTFAILA-TRFFTGCAQGFFYPSLSSLVSKHVKDSDKGFVTGVVFSGCSIGTIATGFFGSIIMEHTSWRFVFVLIGGFSMLWIYAFRFYYHVDKNSKPKTTVDFSSHKVNTES-FPWRRLLRRASVWAFLVAFFAYGYTFYVLLSWAPAYFHDAFPESKGWIFNVIPWLASFAVQNIAGYYSNTLMSSGASTTYVRKLYAAMLFLGTGLFSLLLNTVESFQQALFVMALTVGVNAFSTSSISLNAQDLSPKHAGALFGFGNSLSALGGSIGVYLTGWILEHSGRWSYVFLINSAISFFAFIVFQLFGSAEAV 444
             +    D  W+  +   WT  L +G+ L+YC R+SM +C  +++++ GW+K+ +G+ LS+FF+GY  T ++GG+  DR GGE++I+ S++ W ++T V P  +     L+S   A +  +R   G  QG ++P+L+SL+S+ V++S++ F   +V +G   GT+ TG  GS+++E   W+ +F   GG ++LW++    Y   +K+      V   S  V+  +  PWRRL R+ +VWA +V+  +   +F++LLSW P +F + FP++KGWIFNV+PWL +      +G+ S+ L++ G     VRKL   M    + +F+L L    SF +++   + ++G+  F+ S IS+N QDL+P  AG LFG  N+  AL G +GV L G+++E +G W+ +F + + IS      F +FG A+ V
Sbjct:    9 RRDMAGDTQWSRPECQAWTGTLLLGTCLLYCARSSMPICTVSMSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGSITAVTPLLA----HLSSAHLAFMTFSRILMGLLQGVYFPALTSLLSQKVRESERAFTYSIVGAGSQFGTLLTGAVGSLLLEWYGWQSIFYFSGGLTLLWVWYVYRYLLSEKDLILALGVLAQSRPVSRHNRVPWRRLFRKPAVWAAVVSQLSAACSFFILLSWLPTFFEETFPDAKGWIFNVVPWLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVVFASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRV 427

The following BLAST results are available for this feature:

BLAST of TCONS_00004172-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
S17A9	6.618e-93	35.22	Solute carrier family 17 member 9 OS=Homo sapiens ...	[more]

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TCONS_00004172-protein (polypeptide) - C. hemisphaerica

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