TCONS_00002577-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002577-protein
Unique NameTCONS_00002577-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002577-protein ID=TCONS_00002577-protein|Name=TCONS_00002577-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
RHRFTENMKYFLAGILFFCVIYYFQGSEKRTNLQEEMKEFNKKFQNGFPR
QKIRERLSRKSFFDPKLILFYTEFFGTRPWKRHFVRENLKCRMKIPCHVS
FDPERFVDSHAVIFHLLDIKYFEELRMLNAHPIRSKQIWIIFTMENPLSA
IFNPELDDLFNFTMSYRAESDFRFSYGYYYPRKEPADQLRTVPTPKVNFA
VTKSKQVAWLVSNCGKFRDSLVQKLEKNSYITTYVGGKCSKYYKNQLKCK
GHICNETLSEHKFYLAFENSFCPDYVTEKYWFHPIQNHMIPIVLGGANYK
DPKLAIPGSFIDVFDFKSPKHLMDYILEIDYDDTLFNSYFDWRNKYEFFS
EDWECHKAVNDICTKMNTD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001396XLOC_001396Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002577TCONS_00002577Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031481Glyco_tran_10_N
IPR001503Glyco_trans_10
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 65..177
e-value: 6.9E-18
score: 65.0
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 203..367
e-value: 2.6E-41
score: 141.2
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 63..352

Blast
[Close]
BLAST of TCONS_00002577-protein vs. Swiss-Prot (Human)
Match: FUT6 (Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens GN=FUT6 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.450e-37
Identity = 94/271 (34.69%), Postives = 136/271 (50.18%), Query Frame = 0 
Query:   90 KCRMKIP----CHVSFDPERFVDSHAVIFHLLDIKYFEELRMLNAHPIRSKQIWIIFTMENPLSAIFNPELDDLFNFTMSYRAESDFRFSYGYYYP-RKEPADQLRTVPTPKVNFAVTKSKQVAWLVSNCG--KFRDSLVQKLEKNSYITTYVGGKCSKYYKNQLKCKGHICNETLSEHKFYLAFENSFCPDYVTEKYWFHPIQNHMIPIVLGGANYKDPKLAIPGSFIDVFDFKSPKHLMDYILEIDYDDTLFNSYFDWRNKYEFFSEDW 353
            +C   +P    C+++ D + +  + AVI H  ++ Y    ++  + P R  Q WI F+ME+P        +D  FN TMSYR++SD    YG+  P   +PA        P +N +  K++ VAW VSN G    R    Q L+ +  +  Y  G+  K              ETLS +KFYLAFENS  PDY+TEK W + ++   +P+VLG +     +   P +FI V DF+SPK L  Y+ E+D D   + SYF WR      S  W
Sbjct:   79 RCSEMVPGTADCNITADRKVYPQADAVIVHHREVMYNPSAQLPRS-PRRQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFTPYGWLEPWSGQPAH-------PPLNLSA-KTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVY--GRSHK------PLPQGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSW 332
The following BLAST results are available for this feature:
BLAST of TCONS_00002577-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT61.450e-3734.69Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens G... [more]
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