Erg protein (polypeptide) - C. hemisphaerica

Overview


Name	Erg protein
Unique Name	TCONS_00002512-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	495

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00002512-protein ID=TCONS_00002512-protein|Name=Erg protein|organism=Clytia hemisphaerica|type=polypeptide|length=495bp
MALKRQEKLRNDLTFAHTQISTQQQNNKMFAGSDLSNNVVPDPTAYAQEA
LSMGSMDEQSLFDSYENQKVPSGKPPKLTDSDPWSKKRSIESDFDDFHIP
PKRANMFENETKPEIQPEDDKRVIVPADPMCWTNEHVRQWVQWAIKEFSL
KDVDVNTFTMTGQELCKLTREEFLRLAPAYNGDILMAHLCVLRKAPLPNL
TTEDIDKALAPPLSHNANNGAKVPSYPRTEAEKRPASPPVGSYSRSVPVA
RADGSEYLTSCAYNQSSSSSSSSTPSSSTNRDSVVPSKSFESPPTSHSEY
NPSCPSPKPASLPPTTSHGGSGQIQLWQFLLELLSDPSHASFIAWEGNNG
EFKLTDPDEVARRWGERKNKPNMNYDKLSRALRYYYDKNIMTKIHGKRYA
YKFDFQGLAQLNQPITSDAQLHAAQAAAAAYRGEYPFYSPYGPPPAPGSP
YGYPSSSYPQCYSSVQSPSNQYGYPWGRSSYPTSMYSRQSSAPYF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001343	XLOC_001343	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00002512	TCONS_00002512	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000418	Ets_dom
IPR003118	Pointed_dom
IPR011991	WHTH_DNA-bd_dom
IPR013761	SAM/pointed

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000418	Ets domain	PRINTS	PR00454	ETSDOMAIN	coord: 324..337 score: 67.09 coord: 348..366 score: 54.57 coord: 367..385 score: 75.66 coord: 386..404 score: 49.73
IPR000418	Ets domain	SMART	SM00413	etsneu2	coord: 323..408 e-value: 2.4E-58 score: 209.8
IPR000418	Ets domain	PFAM	PF00178	Ets	coord: 325..403 e-value: 1.0E-36 score: 125.1
IPR000418	Ets domain	PROSITE	PS00345	ETS_DOMAIN_1	coord: 326..334
IPR000418	Ets domain	PROSITE	PS00346	ETS_DOMAIN_2	coord: 370..385
IPR000418	Ets domain	PROSITE	PS50061	ETS_DOMAIN_3	coord: 324..404 score: 48.155
IPR003118	Pointed domain	SMART	SM00251	SAM2_3	coord: 107..196 e-value: 2.5E-29 score: 113.4
IPR003118	Pointed domain	PFAM	PF02198	SAM_PNT	coord: 120..195 e-value: 7.7E-27 score: 93.0
IPR003118	Pointed domain	PROSITE	PS51433	PNT	coord: 111..196 score: 49.376
None	No IPR available	GENE3D	1.10.150.50		coord: 128..193 e-value: 1.7E-23 score: 82.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..36
None	No IPR available	CDD	cd08531	SAM_PNT-ERG_FLI-1	coord: 125..198 e-value: 4.82531E-40 score: 138.697
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	1.10.10.10		coord: 310..418 e-value: 3.5E-48 score: 161.6
IPR011991	Winged helix-turn-helix DNA-binding domain	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 321..475
IPR013761	Sterile alpha motif/pointed domain	SUPERFAMILY	47769	SAM/Pointed domain	coord: 115..195

Blast

[Close]

BLAST of Erg protein vs. Swiss-Prot (Human)
Match: ERG (Transcriptional regulator ERG OS=Homo sapiens GN=ERG PE=1 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 5.495e-98
Identity = 168/355 (47.32%), Postives = 220/355 (61.97%), Query Frame = 0

Query:   94 FDDFHIPPKRANMFENETKPEIQPEDDKRVIVPADPMCWTNEHVRQWVQWAIKEFSLKDVDVNTF-TMTGQELCKLTREEFLRLAPAYNGDILMAHLCVLRKAPLPNLTTEDIDKAL--APPLSHNANNGAKVPSYPRT----EAEKRPASPPVGSYSRSVPVARADGSEYLTSCAYNQSSSSSSSSTPSSSTNRDSVVPSKSFESPPTSHSEYNPSCPSPKPASLPPTTSHGGSGQIQLWQFLLELLSDPSHASFIAWEGNNGEFKLTDPDEVARRWGERKNKPNMNYDKLSRALRYYYDKNIMTKIHGKRYAYKFDFQGLAQLNQPITSDAQLHAAQAAAAAYRGEYPFYSPY 441
             ++ H+PP   NM  NE          +RVIVPADP  W+ +HVRQW++WA+KE+ L DV++  F  + G+ELCK+T+++F RL P+YN DIL++HL  LR+ PLP+LT++D+DKAL  +P L H  N G     +P T    EA +R  + P   Y    P  R+  + +      ++++  S S+ P +   R  + P +     PTS    NP                 GSGQIQLWQFLLELLSD S++S I WEG NGEFK+TDPDEVARRWGERK+KPNMNYDKLSRALRYYYDKNIMTK+HGKRYAYKFDF G+AQ  QP       H  +++   Y  + P+   Y
Sbjct:  115 MEEKHMPP--PNMTTNE----------RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQRITTRPDLPYE---PPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILG--PTSSRLANP-----------------GSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQP-------HPPESSLYKYPSDLPYMGSY 428

The following BLAST results are available for this feature:

BLAST of Erg protein vs. Swiss-Prot (Human)

BLAST of Erg protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ERG	5.495e-98	47.32	Transcriptional regulator ERG OS=Homo sapiens GN=E...	[more]

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Erg protein (polypeptide) - C. hemisphaerica