TCONS_00001719-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001719-protein
Unique Name	TCONS_00001719-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	806

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001719-protein ID=TCONS_00001719-protein|Name=TCONS_00001719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=806bp
MSKLLSTHTLVILALVSAQFTRSKRMEGQFLGLLTLTRCQPEQKKECQHA
LMNQESIIKADQQHHFWFKVNLCFKDMRNNSNTVTDTLLPLVVDESYSGI
KCENKKGVYKQSGHMTLVFTYLSFDLTRLVSSMILPLNSFNLVSVTDQPM
YPAYFLDHPLAIYSYESSFGVNMHTNFIKIKNKLNITYNAFFNLRDENQT
SIRSTKELCANDPSASAMCIYRSLNPMDCYKELNIDVHDQNAINNALNLL
TSYNLSFIVQAGDSTSIDTFLRKAGLQGQKMTKRLYLPFVTKTISSYDPN
RDLSFMESTVLINFQGSGAVNHFFILSFNLPNILLQEFRIKRESTWVLFL
KEKRFQNRLKNLFPCWQLRFLDMTYRCGNDITLTQFFRIPISFLKSGINR
MLTEQGWVEFLIVFWKSIYYIANVTPENILRESQWSYNPSIALKARPYCD
ERKPLCQAGYELKHSFYEEKDWDQSYGWNCKLCPDKFYKPYQGNKQRCQE
CYYPNRVNSNNTLCYDPFIEATLNIKYSTTWIILAPSALLVIMTLLTMFV
FLINRETPIVKLSNHKMTIIQLINHLLLFILPSFVFFHTTTLMCIGRQIL
LGLAFSITLSINISKSQKLYMIVGSKIKMSPVEILMTKASEWLIIVIAII
INTVLNILYFFNSKRVTIEAKYFDNLLTKELYCSNNIMIYIQLLFAAVLS
LCSGIQGFRARKLPSRFQETNHVIYSSFISTVVFVAATGVYFSQQSMVNR
SFIVLLVTTIYNAAHFILLYGYKTFIIIFRPQVNTREAFNKMRLQEMALK
NNNFTS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000905	XLOC_000905	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001719	TCONS_00001719	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR017978	GPCR_3_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 602..623 score: 24.29 coord: 557..579 score: 33.29 coord: 695..718 score: 25.0
IPR017978	GPCR family 3, C-terminal	PFAM	PF00003	7tm_3	coord: 542..781 e-value: 5.1E-22 score: 78.7
IPR017978	GPCR family 3, C-terminal	PROSITE	PS50259	G_PROTEIN_RECEP_F3_4	coord: 537..793 score: 25.058

Blast

[Close]

BLAST of TCONS_00001719-protein vs. Swiss-Prot (Human)
Match: GRM7 (Metabotropic glutamate receptor 7 OS=Homo sapiens GN=GRM7 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.351e-20
Identity = 77/322 (23.91%), Postives = 147/322 (45.65%), Query Frame = 0

Query:  478 WNCKLCPDKFYKPYQGNKQRCQECYYPNRVNSNNTLCYD-PFIEATLNIKYSTTWIILAPSALLVIMTLLTMFVFLINRETPIVKLSNHKMTIIQLINHLLLFILPSFVFFHTTTLMCIGRQILLGLAFSITLSINISKSQKLYMIVGSKIKMSPVEILMTKASEWLIIVIAIIINTVLNILYFFNSKRVTIEAKYFDN-LLTKE-----LYCS-NNIMIYIQLLFAAVLSLCSGIQGFRARKLPSRFQETNHVIYSSFISTVVFVAATGVYFSQQSMVNRSFIVLLVTTI----YNAAHFILLYGYKTFIIIFRPQVNTRE 787
            W C+ C D +   YQ ++  CQ C Y  R N N T C D P I+   +  ++   + LA   L +I T+  M  F+   +TPIV+ S  +++ + L    L +I+   +       +C  R++ LGL   I+ +  ++K+ ++Y I     K      L++  S+ L I  ++I   +L +  +F      I   Y ++  +  E     L C   ++ I   L ++ +L +   +   + R +P  F E   + ++ + + +V++A   ++F       + +I     TI      +    +LY  K +IIIF P++N ++
Sbjct:  543 WTCEPC-DGYQ--YQFDEMTCQHCPYDQRPNENRTGCQDIPIIKLEWHSPWAVIPVFLA--MLGIIATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQ-LAITSSLISVQLLGVFIWFGVDPPNIIIDYDEHKTMNPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQK 858

The following BLAST results are available for this feature:

BLAST of TCONS_00001719-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001719-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRM7	1.351e-20	23.91	Metabotropic glutamate receptor 7 OS=Homo sapiens ...	[more]

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TCONS_00001719-protein (polypeptide) - C. hemisphaerica