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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002583 ID=TCONS_00002583|Name=TCONS_00002583|organism=Clytia hemisphaerica|type=transcript|length=833bp
AGATGATATTTTTGAAGCTTTGATTGAACCTAATGAAACAGACTTTGATT
TATTGAAACAGCTCCTCAATATTATATTTGGAGCCTTTGTTATGATTAGT
GAACGTATGCTCTATGATCACCTTCATGGCGCTTACAAATCTCCTTCTGC
CAAGTTGGTCGAGGAGGCAAAAAACGTTCCAACAACTAATGCTTCCGCAG
AGTGCGATTTTGGGAAGTTGGACCGACTTATGAAGTCCAAGCCCAAAGCG
CTTGACCTTGTCTATGAGGGTATCATAATGTATACTACTAATCATACCAA
AGAATGGAGGGATAAATTGAGCCCTGCTAGATTAGCTGAAGTTATGGAAA
TAGCTAGACTTTCCAAAAGGAAACAGAAGGCTGATTTTTTCGAACGTAAA
AATAACATTCATGAAAAACGAGCCGGAAATCTGAAGATCATGGCGGATGA
TAAAGCCCGAAAGGAACTTAAACTTATTGCGGACAAAGAAAATCTCACTA
TTTCTATTCAGCAATATGGTGGCTTATGGATAGACAAAGAACAACTAGAC
ActgctttaaaaaaattagagaCTGATAAACTGAAACGAGAGGCCTTAAA
GTGTCAGCTgcaatttagaaaaaaagttataaataGCAATGCTGAAAAGT
CTCTATTTTACATGACTGTTGATTCAAAAAACAAACCAGTAGAGGAAGTT
CGGGAGAATTTGATTGAAGTGATTGAAAATTCCTGATCTTACagaaaaat
ctgaagaaaaagatttcagTACTCCTGTTGTCCTAGATGATGATTTAGTG
CAAcaagagaaaaaataatttcttgagctagca Run BLAST on NCBI protein sequence of TCONS_00002583-protein >TCONS_00002583-protein ID=TCONS_00002583-protein|Name=TCONS_00002583-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
DDIFEALIEPNETDFDLLKQLLNIIFGAFVMISERMLYDHLHGAYKSPSA
KLVEEAKNVPTTNASAECDFGKLDRLMKSKPKALDLVYEGIIMYTTNHTK
EWRDKLSPARLAEVMEIARLSKRKQKADFFERKNNIHEKRAGNLKIMADD
KARKELKLIADKENLTISIQQYGGLWIDKEQLDTALKKLETDKLKREALK
CQLQFRKKVINSNAEKSLFYMTVDSKNKPVEEVRENLIEVIENS Run BLAST on NCBI transcript from alignment at sc0000020:880875..881707 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002583 ID=TCONS_00002583|Name=TCONS_00002583|organism=Clytia hemisphaerica|type=transcript|length=833bp|location=Sequence derived from alignment at sc0000020:880875..881707 (Clytia hemisphaerica)
tgctagctcaagaaattattttttctcttgTTGCACTAAATCATCATCTA
GGACAACAGGAGTActgaaatctttttcttcagatttttctGTAAGATCA
GGAATTTTCAATCACTTCAATCAAATTCTCCCGAACTTCCTCTACTGGTT
TGTTTTTTGAATCAACAGTCATGTAAAATAGAGACTTTTCAGCATTGCta
tttataactttttttctaaattgcAGCTGACACTTTAAGGCCTCTCGTTT
CAGTTTATCAGtctctaatttttttaaagcagTGTCTAGTTGTTCTTTGT
CTATCCATAAGCCACCATATTGCTGAATAGAAATAGTGAGATTTTCTTTG
TCCGCAATAAGTTTAAGTTCCTTTCGGGCTTTATCATCCGCCATGATCTT
CAGATTTCCGGCTCGTTTTTCATGAATGTTATTTTTACGTTCGAAAAAAT
CAGCCTTCTGTTTCCTTTTGGAAAGTCTAGCTATTTCCATAACTTCAGCT
AATCTAGCAGGGCTCAATTTATCCCTCCATTCTTTGGTATGATTAGTAGT
ATACATTATGATACCCTCATAGACAAGGTCAAGCGCTTTGGGCTTGGACT
TCATAAGTCGGTCCAACTTCCCAAAATCGCACTCTGCGGAAGCATTAGTT
GTTGGAACGTTTTTTGCCTCCTCGACCAACTTGGCAGAAGGAGATTTGTA
AGCGCCATGAAGGTGATCATAGAGCATACGTTCACTAATCATAACAAAGG
CTCCAAATATAATATTGAGGAGCTGTTTCAATAAATCAAAGTCTGTTTCA
TTAGGTTCAATCAAAGCTTCAAAAATATCATCT Coding sequence (CDS) from alignment at sc0000020:880875..881707 >TCONS_00002583 ID=TCONS_00002583|Name=TCONS_00002583|organism=Clytia hemisphaerica|type=CDS|length=735bp|location=Sequence derived from alignment at sc0000020:880875..881707 (Clytia hemisphaerica)
TCAGGAATTTTCAATCACTTCAATCAAATTCTCCCGAACTTCCTCTACTG
GTTTGTTTTTTGAATCAACAGTCATGTAAAATAGAGACTTTTCAGCATTG
CtatttataactttttttctaaattgcAGCTGACACTTTAAGGCCTCTCG
TTTCAGTTTATCAGtctctaatttttttaaagcagTGTCTAGTTGTTCTT
TGTCTATCCATAAGCCACCATATTGCTGAATAGAAATAGTGAGATTTTCT
TTGTCCGCAATAAGTTTAAGTTCCTTTCGGGCTTTATCATCCGCCATGAT
CTTCAGATTTCCGGCTCGTTTTTCATGAATGTTATTTTTACGTTCGAAAA
AATCAGCCTTCTGTTTCCTTTTGGAAAGTCTAGCTATTTCCATAACTTCA
GCTAATCTAGCAGGGCTCAATTTATCCCTCCATTCTTTGGTATGATTAGT
AGTATACATTATGATACCCTCATAGACAAGGTCAAGCGCTTTGGGCTTGG
ACTTCATAAGTCGGTCCAACTTCCCAAAATCGCACTCTGCGGAAGCATTA
GTTGTTGGAACGTTTTTTGCCTCCTCGACCAACTTGGCAGAAGGAGATTT
GTAAGCGCCATGAAGGTGATCATAGAGCATACGTTCACTAATCATAACAA
AGGCTCCAAATATAATATTGAGGAGCTGTTTCAATAAATCAAAGTCTGTT
TCATTAGGTTCAATCAAAGCTTCAAAAATATCATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002583-exon-sc0000020-1491911889:880875..881707 | TCONS_00002583-exon-sc0000020-1491911889:880875..881707 | Clytia hemisphaerica | exon |
| TCONS_00002583-exon-sc0000020-1510915933:880875..881707 | TCONS_00002583-exon-sc0000020-1510915933:880875..881707 | Clytia hemisphaerica | exon |
| TCONS_00002583-exon-sc0000020-1575043694:880875..881707 | TCONS_00002583-exon-sc0000020-1575043694:880875..881707 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000020 | supercontig | sc0000020:880875..881707 . |
Blast
The following BLAST results are available for this feature:
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