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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022125 ID=TCONS_00022125|Name=TCONS_00022125|organism=Clytia hemisphaerica|type=transcript|length=1061bp
TGGGTACTTAAGTATTGATTTACACTTgaatgcaaaaaaataaatctatC
ATACAAGTTATGATTTATATGTAATTTAaaccaaatcaaaattaaaaaaa
ttcgtAATCAAATTATTACGATTTCATAGACTACTACTAAAAGAGGGTCG
AGTAGTTTATACAACACCCATGGCACTTGAGCTCTACTTGACGAGTTTTA
ATAAAAATTGGTGTCATATAATCTGCTTTGTAACGACATNGTACGATGAA
ATCGGCTGGATAGGGGGAATCAGCTGGGCACGGTGAAATCGGCTGGGCAC
GGTGAAATCAGCTGGGTAGGGGGAATGGACTGGTTACGGTAAAATCAGCT
GGGTACGATGAAATCGGCTGGATGGGGGAAATCGGCTGGGTACGATAAAA
TCGGCTGGATGGGTGAAATCAGCNGTAGTTCATACAACACCCATAGCACT
TGAGCTCTACTTGACGAGTTTTAATAAAAATTGGTGTCATATAATCCGGT
TTGTAACGACATCATTAGTGTACTAAATACCAACCAAACAACCAAAAATT
CGGATGTTCTAAGCGTTTttagttttaagtctaaaaatgtacgtaaaatg
taatttcttaagaaattgttcttaacttgttcttaatattttgccatcaa
agcctttaaatgttcttaaataataagaatatactttataagaatatcca
tgatgaaattggccaaattattaagaatatgctaagaatatcaccatcat
ggaatttagctacttaagaatgccatttttagagcattttcaattataaa
ttgccaagtACCTCCAAGTAACGCTCAgtactttcacaaaaataccattt
tatgCTTTAGGCAAATGTATCAAATGTTTAATATAGTCTGAATTAGGTTC
CTAacttaagaatgctgtaagaatattttaggatgatttttcccaaaagg
ttaagaatatccatcatgaaatgaaaaaaacaccatccttataaaaaagc
gtgcagtttctccttataaaaaaacgtgtattagatTTTCCAAGAAAtca
ttttccaatat Run BLAST on NCBI transcript from alignment at sc0000405:165941..167001- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022125 ID=TCONS_00022125|Name=TCONS_00022125|organism=Clytia hemisphaerica|type=transcript|length=1061bp|location=Sequence derived from alignment at sc0000405:165941..167001- (Clytia hemisphaerica)
TGGGTACTTAAGTATTGATTTACACTTGAATGCAAAAAAATAAATCTATC
ATACAAGTTATGATTTATATGTAATTTAAACCAAATCAAAATTAAAAAAA
TTCGTAATCAAATTATTACGATTTCATAGACTACTACTAAAAGAGGGTCG
AGTAGTTTATACAACACCCATGGCACTTGAGCTCTACTTGACGAGTTTTA
ATAAAAATTGGTGTCATATAATCTGCTTTGTAACGACATNGTACGATGAA
ATCGGCTGGATAGGGGGAATCAGCTGGGCACGGTGAAATCGGCTGGGCAC
GGTGAAATCAGCTGGGTAGGGGGAATGGACTGGTTACGGTAAAATCAGCT
GGGTACGATGAAATCGGCTGGATGGGGGAAATCGGCTGGGTACGATAAAA
TCGGCTGGATGGGTGAAATCAGCNGTAGTTCATACAACACCCATAGCACT
TGAGCTCTACTTGACGAGTTTTAATAAAAATTGGTGTCATATAATCCGGT
TTGTAACGACATCATTAGTGTACTAAATACCAACCAAACAACCAAAAATT
CGGATGTTCTAAGCGTTTTTAGTTTTAAGTCTAAAAATGTACGTAAAATG
TAATTTCTTAAGAAATTGTTCTTAACTTGTTCTTAATATTTTGCCATCAA
AGCCTTTAAATGTTCTTAAATAATAAGAATATACTTTATAAGAATATCCA
TGATGAAATTGGCCAAATTATTAAGAATATGCTAAGAATATCACCATCAT
GGAATTTAGCTACTTAAGAATGCCATTTTTAGAGCATTTTCAATTATAAA
TTGCCAAGTACCTCCAAGTAACGCTCAGTACTTTCACAAAAATACCATTT
TATGCTTTAGGCAAATGTATCAAATGTTTAATATAGTCTGAATTAGGTTC
CTAACTTAAGAATGCTGTAAGAATATTTTAGGATGATTTTTCCCAAAAGG
TTAAGAATATCCATCATGAAATGAAAAAAACACCATCCTTATAAAAAAGC
GTGCAGTTTCTCCTTATAAAAAAACGTGTATTAGATTTTCCAAGAAATCA
TTTTCCAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022125-exon-sc0000405-1575043694:165941..167001 | TCONS_00022125-exon-sc0000405-1575043694:165941..167001 | Clytia hemisphaerica | exon |
| TCONS_00022125-exon-sc0000405-1510915933:165941..167001 | TCONS_00022125-exon-sc0000405-1510915933:165941..167001 | Clytia hemisphaerica | exon |
| TCONS_00022125-exon-sc0000405-1491911889:165941..167001 | TCONS_00022125-exon-sc0000405-1491911889:165941..167001 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000405 | supercontig | sc0000405:165941..167001 - |
Blast
The following BLAST results are available for this feature:
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