TCONS_00021600 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021600
Unique NameTCONS_00021600
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021600 ID=TCONS_00021600|Name=TCONS_00021600|organism=Clytia hemisphaerica|type=transcript|length=1635bp
CTCCACGGCGTATTCACAATGTAATCAAGAGAAGGCTATTATGGAGAGAT
TTTATCCTGTCACCATCGAACCTGGCCGCATACTTGAAGCAATGGAGTGG
ATGAACGACGAGATGCTTGCCGGATTCACAGAACCATTGATCGATAAATA
TCCCAATACCTACACATTTACTAAAGCACTCGCTGAGCACCTTATTAAGA
AAGAATCTGAAAATATACCATTTATGATTGTCCGCCCGTCCATTGTCAGT
TCCAGTATCTCTGATCCTTTTCCTGGCTGGGTAGATAATTACAACGGTGT
CAGTGGTATTGTTGTTGCTATTTCGCGAGGTCTCCTGCGTTCAATGCATG
TCCCGACGGTTATCAAACACGATATCGTTCCTGTAGACTATGTGTCCAAT
TGTATCATCACTTCAACGTGGTACTATGCTACTTCAAGAGACAAGCAACC
ATTGATTTGCAACTGTACGTCAAGCGGTGTCAATCCTACATCATTCTGTG
ACCTAGGAAATATGGTTAACGACTTTTACACCTATGACAATCCACTGAAT
TGTATAATACGTCGTCCCAACTTCAAGGTTACAAACAgATATATGAATCA
GTATTGGCAAGTGTTCAGTCACTATCTACCAGCTATCATCCTCGATGGAT
TGTCCATCATCACTGGATCAAAACCAAGGTTTATGAACATCTACCGAACA
ATTGACACCTCTTTAACAACACTCGACTACTTCATTCAAAACCAGTGGAA
GTGGGGTAACCATAATCAACAAAAGATATTGAAAGCCATTCCCGAAGATG
AAGTCGAGGTATACGATTTTGATATGCGCAAGATAGTTTGGAAGACATAT
TATCAAGAAATGATGACAGGAATAAAATTGTATTTAGTGAAAGAAGATCA
GTCAGAACTCCCTAAAGCCCGAAGCACACATCGAAGATACAAAATGGTGC
GATGGTTGTCTTCtacgattttcattttattggcTGGTCGATTCTTCTTC
TTGAAATCTGAAAGATTCCGTAAATTATGGTTCGAAGCTTTGTTCTCCAT
CTACAAATTTTTGCACCTTCTACGAATTCCAACTTTTCGAATTGTATGAT
ATGTGAAATGAAGAAAGGGCATTTTCATTGGTCGTTCATTTTTCTTGGTC
GTTCATTGGTCATTCTGTgaatctattttattgaaatttgtttcaatttg
GTTTTTCAATCAGATCAACGCGGCTGTACTGAAATATGAGGAGTACATAA
TTTACTCCTTCTTACCggtgttttgatagatttaaaaaaaactctCTTAG
GTGAATTTATTATAGTTGtaatttgttaaatttttcttcttaaCCCTTAA
TTATATACCTGGAAGTTTTAATAACTAAATTTTATGTGCTAAGCCACCTT
Ttatgttgaaaattgaaaaatgtatatctatctatctatctacttttaaa
aatttgatttatttttaattcgGTACGCACCAAAGTTAGTCCAATCAATA
TATTTATTTGTGCTTAATTGCCTTACGGGTTCTTTATTGAATATTAAGAT
GCATATAAGCAGAATGTCGTATTCTTGATTATGATTTTGCGGAAATTTTT
GTATTCGTTATCATTTTTAggtatttattgaaaat
Run BLAST on NCBI

transcript from alignment at sc0000390:204679..212735-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021600 ID=TCONS_00021600|Name=TCONS_00021600|organism=Clytia hemisphaerica|type=transcript|length=8057bp|location=Sequence derived from alignment at sc0000390:204679..212735- (Clytia hemisphaerica)
CTCCACGGCGTATTCACAATGTAATCAAGAGAAGGCTATTATGGAGAGAT TTTATCCTGTCACCATCGAACCTGGCCGCATACTTGAAGCAATGGAGTGA GTATACTGGGACCATTACAACACGCTGGAAAGTCCATCAGTAATTTTGTA CATTTTTGTGATATAGTTTTAAACTGTCAAGCATGGATCTATCCATACTT ATCTATCTATACTTTCTATAGAAAGTATTGGGTCATTTTTTATTAGGCTT TTTTCAAGATGTGAAAGTGCCTAATATTCCTCTGAGACANGGGGCTTAGG CAAGTGAAGGTATGGGTATGTGCCGTCCTTAAGGATGCCTTTTTGCGAAC CTGGCAGTCCCTGTAACGTTTCGAAAAATCTGAAAATTGAATCTCAGTCC CATCAAGGGTCATATAATAGGGAATTTTCAATTTTTTACGTCTAAAAACA ACGAAAGAGTCGTAAAATTCGCAAAATCTTACAGTTTTCCATCATTTTAA GTTCTGCTAAGGGACCGAGGGTCGACANAAGAAATTTTGGCGGATTTGGC CAAAATCCGCCAAATTAAGTTCCCGCCAAAAGTTATATTATCCGTAGTCC GCCAAATCAAATTCTCGCCAAATTTAATTTATATAACGTATCGCCAAATT TCGTCCTATATTAGACTCCAAAATTTGGTTTTCAACGATTTTGCTATCAT TTTTTACCCTAAATATCTTGCAACCGCCAAACTTAATTTTCACGGCCATC CGCCAAATTCAATTCCGTCTGAAAAAACTTTTTCAACCATCTGTCAATNG CGGCAACCCCCGTCATCCTGTAAACCTAGGATTCCCTCGCCCTTCGGGTG TGCCTGCACCTTTCAAGTTCGATCTCTAAAAAGTCTTACCTCTGCTTGGT TTTGTTTGAAATGTTTTCACTTAAACGAGAGGCAATTTCTTCCAAAAAGC CGAAAAAGTCATGTTATTGTTATTGTTATCTGTTGTTATTCTACGTTAGT TATTATATTATGACCTAAGAAAATCTCAAAGTTTTCTCTTTTCTAATACC ATACCAATTTCTTGAACTTTAAACTCAAGTAACTTCGCTTTTATTAGGGT TGCAATGGAAATGAATGTGGTAGCCGTCAAAGAAATTCTTACTCTTGCAA AAGCCCTGAAACATTTAGAGGTATCGGCATTCTTTTCTTTCGAACATACA AACTAACCTAAGTCATGCAGGAACATTTATGACAAAACATTCATCAAGCA GCTTACTCTATGTTAAATTTTGACATAGATATTTTTAATCAAAATCAAGG CAATTTTTCTTGTTGTTGGTTTCTAGGTATTTTGTCACGTCTCCACGGCG TATTCACAATGTAATCAAGAGAAGGCTATTATGGAGAGATTTTATCCTGT CACCATCGAACCTGGCCGCATACTTGAAGCAATGGAGTGAGTATACTGGG ACCATTACAACACGCTGGAAAGTCCATCAGTAATTTTGTACATTTTTGTG ATATAGTTTTAAACTGTCAAGCATGGATCTATCCATACTTATCTATCTAT ACTTTCTATAGAAAGTATTGGGTCATCTTTTATTAGGCTTTTTTCAGTAT GATTTTCATGCAGGCTATGATACGACCGGACAATGGTTTTCAAGATGTGA AAGTGCCTAATATTCCTCTGAGACATGGCATCACCTCAAACACTTTTCAC GTTGTCAAAAATCTGTGCTTCTCTTTCTTTCCGTCTGTCTATTTGTCTGT TATTCCGTCTGTAATACTTTAAAGGAAGAAATTTTGGCGGATTTGGCCAA AATCCGCCAAATTAAGTTCCCGCCAAAAGTTATATTATCCGTAGTCCGCC AAATCAAATTCTCGCCAAATTTAATTTATATAACGTATCGCCAAATTTCG TCCTATATTAGACTCCAAAATTGGGTTTTCAACGATTTTGCTATCATTTT TTACCCTAAATATCTTGCAAACTTAATTTTCACGGCCATCCGCCAAATTC AATTCCGTCTGAAAAAACTTTTTCAACCATCTGCCAATGAAATTAAATTC CCGCCAAAATCTCCTCATTTAATGTAATCGAACTTTGCAGGTGGATGAAC GACGAGATGCTTGCCGGATTCACAGAACCATTGATCGATAAATATCCCAA TACCTACACATTTACTAAAGCACTCGCTGAGCACCTTATTAAGAAAGAAT CTGAAAATATACCATTTATGATTGTCCGCCCGTCCATTGTCAGTTCCAGT ATCTCTGATCCTTTTCCTGTAAGTTTTGACTTGACTGTATTTCTCGTCTA TTTTAGTTTTTCACTTTGAATTATTATTCTAACCTTACTATTATTTCAGT TTCGTAAGATTATTAACATTCTACTTGAAAACTGTCAATGGTGTTGTTTA TGCACGTTGCAATTATCTTGTACCCACATTTTTTCACTTTCAGGGCTGGG TAGATAATTACAACGGTGTCAGTGGTATTGTTGTTGCTGTAAGTTGTTCT TTTTTCTCTCTATCACCAAAAAACAGGTCCCTAGGTTCACTTAACTAAAA TTAACTGAGATCAAGTAATAGTAATTTTAAAAGACTTTTAATAGGATATG TATTGTACTATACTTCTACTACTATCTTAGAGATTTTGGGATTTTATCGA AGCAATCCTGAGAGGGGTTGTTCGAGGTTAAATAATTGATTTTTGGACCT ACCCCGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTTTGTTCGTT CGTTCGTTCGTTCGTTATTAGTTTTCGTCATGATTGGCTCATTATTTTTT TCTGATTTTTTGCAGAATGTGACGGAGCCTGATTTTCGAAAAAAAAATTT TTTGGGCAAATTTGGGCCAAAAAAAGGCTAAAAAACGGTTTTTTTTTGTG AAAAATTGGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTAC CATCATAGGTAAAAGAAAGCTCAAGCAGATTTTTGCAAACAAATTTTGTA AGCTCAAAAAACGCATGTTTATCTATAAGAATCTCTATTAATAAGCATAC TTCAATGTTTTTAGTCAAATTATTCAAATTTTTTATGAGATAGATGTTTT TTTTGCTCACGAGGACTTACTTTTAAAGAATATGTGTGTTTAGACAAGAA ATTTTGGTTGCTTGGCGTTTTTCTTTTTAGAAAAACTGCCCAAATTCGAT ATCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNACTGAATGATTGTTTAATGGTCACGC TCACGTAGATATCAATTGTATATGTGTTAAATGCATAACCAGGTATGTCC ATAAAAGTATCACTTGTTTTCAAGCGATTTACTCATTTAAAAGGAGGTTT CCCGAAAGCTGATGCCATAAGTTTTTATCGTATAACTATCCTGTGAGATG TTTAATTGATGAATTCGTTTGAAGCAACTCAAAAACTCTTGCGAAATGAT TGTAAACAACCAGTATGAAGTAAAATACAAAATCAAAACAAATGTCACAT GTCAAAACATGAAATCAATTCAATATGACTGTTCTTCTTGTTGAGCAGAT TGTCAATTGTGCATGACACACGATGCTCGAACTTAAGTACTTTAACTGAT ATCCCACCTTTAAGCACCTAAATCCAAACAATTGCATCAACAATTGCAGG GAAAATGAAAACCTGCAATCTAAAAAATACAAAATCCATAATCGAATTAT CGGGAACATCTAATTGAAGGCTAAATCACTCGGTAAAAACATGATACAAT TTCAAAAAAATCTACGAAATTCCATACCTCTAACATTATTTATGGAATCG TTTATTTTGAAATACAAATACGTAATTCTATAAGAAGAGCCTGTAAAGAA AATCGAGGAAATTTAATAATGGTCGCCGGTGCTTATTAGAGGTCCTTATG ACTAATTTTATTTTTGTTCCAGATTTCGCGAGGTCTCCTGCGTTCAATGC ATGTCCCGACGGTTATCAAACACGATATCGTTCCTGTAGACTATGTGTCC AATTGTATCATCACTTCAACGTGGTACTATGCTACTTCAAGGTTTGTCAA TCACCAACCTTAAGAAATCTTTCATGTGACAAGAACAGTCCGACTGCTCC TTTTTGATCACACCTTTCTAAAAACAAAGCTGAGTCTGAATAAAAGGTCA GAAAGAATACCTCATTATTGCCCAAAAATAAAAACAGGGTAAGAACAATT TGAGATTTAAAATGCCAAAAAAATGAACAGCTGAGCCTTTAAGAAAAAAT TTAGTGGTTCTCATTAAAAAGAATTTTTTTTTTTCTTCTCCAGAGACAAG CAACCATTGATTTGCAACTGTACGTCAAGCGGTGTCAATCCTACATCATT CTGTGACCTAGGAAATATGGTTAACGACTTTTACACCTATGACAATCCAC TGAATTGTATAATACGTCGTCCCAACTTCAAGGTTACAAACAGGTAGATT TTGTTTTCTTCTATATTCCTGGGTTAATTCTCAACTTCAGTTGAGCTATA ATCTGAGAATGTCTGTATGTATGTCTGTCNACCTCTAACATTATTTATGG AATCGTTTATTTTGAAATACAAATACGTAATTCTATAAGAAGAGCCTGTA AAGAAAATCGAGGAAATTTAATAATGGTCGCCGGTGCTTATTAGAGGTCC TTATGACTAATTTTATTTTTGTTCCAGATTTCGCGAGGTCTCCTGCGTTC AATGCATGTCCCGACGGTTATCAAACACGATATCGTTCCTGTAGACTATG TGTCCAATTGTATCATCACTTCAACGTGGTACTATGCTACTTCAAGGTTT GTCAATCACCAACCTTAAGAAATCTTTCATGTGACAAGAACAGTCCAACT GCTCCTTTTTGATCACACCTTTCTAAAAACAAAGCTGAGTCTGAGTAAAA GGTCAGAAAGAATACCTCATTATTGCCCAAAAATAAAAACAGGGTAAGAA CAATTTGAGATTTAAAATGCCAAAAAAATGAACAGCTGAGCCTTTAAGAA AAAATTTAGTGGTTCTCATTAAAAAGAATTTTTTTTTTCTTCACCAGAGA CAAGCAACCATTGATTTGCAACTGTACGTCAAGCGGTGTCAATCCTACAT CATTCTGTGACCTAGGAAATATGGTTAACGACTTTTACACCTATGACAAT CCACTGAATTGTATAATACGTCGTCCCAACTTCAAGGTTACAAACAGGTA GATTTTATTTTTTTCTATATTCCTGGGTTAATTTGTATTGTAATCGGACA ATGTACTTCCAGTAGATTTGAAGTTGTTTCTAACGTTTGGACTGAACCTT TATCAACTTTTTTTTCAATTGCACAGATATATGAATCAGTATTGGCAAGT GTTCAGTCACTATCTACCAGCTATCATCCTCGATGGATTGTCCATCATCA CTGGATCAAAACCAAGGTAACACATAACCTCTTACGAAAATGTCACAAGC TACACCTTGTCTTAACACCTTGATTGATATTGAAACAATTTTTGTACGTT TGGAACCCTTTTTACTTTTTATGGTAACCTTTTTAAACTCTGTACACAAT ATTTGATGGATCATTCACTTATTTTCAGGTTTATGAACATCTACCGAACA ATTGACACCTCTTTAACAACACTCGACTACTTCATTCAAAACCAGTGGAA GGTATAGAACTTCTTCTTTAACTGAAACTTATCAAACGATTTCAGACTGT TGAAATATATCACCTTTGCTAACGGACATAAAAATATTAAATCCTCGGGT TTCGTAAAACAATTCTGCCTCAATTCGTACATGTACTAAGGCTTTTACGT GAGATGCAGTTGTCATTATTACATAACTTATTTTTTTAGTGGGGTAACCA TAATCAACAAAAGATATTGAAAGCCATTCCCGAAGATGAAGTCGAGGTAA GATGAAATTTTAGCCTGAAATGTTTCAAACAAAAATGAAATGAAGATGTT CTCAAAGTCTGTTTTGATAATGTACAAAAAGCTTCGTATTTATGTTCTGA CACGGCTTGTTGATTGATCATGGTAAATATAATGAAGATGATTGTTTTTC AATTTTATATACTGATACCTTTATACCTTACAGGCCTTGTCTTTTTTTGG TTGTAGGTATACGATTTTGATATGCGCAAGATAGTTTGGAAGACATATTA TCAAGAAATGATGACAGGAATAAAATTGTATTTAGTGAAAGAAGATCAGT CAGAACTCCCTAAAGCCCGAAGCACACATCGAAGGTTTTTGCCCTACTTT TCAATTTCTTTTGATAACTGTTGCCAGGTTCATAGGTTGCTGGCATCCTC ATACTCCTTATAGATTATCAACCATTGGATTTGTGTAGACTATCAGATTT TCTATGCTAAATAGATAGCTCCTATGAATTTTTCTAAGTAGCATTTTCTT GCTTTTAGATACAAAATGGTGCGATGGTTGTCTTCTACGATTTTCATTTT ATTGGCTGGTCGATTCTTCTTCTTGAAATCTGAAAGATTCCGTAAATTAT GGTTCGAAGCTTTGTTCTCCATCTACAAATTTTTGCACCTTCTACGAATT CCAACTTTTCGAATTGTATGATATGTGAAATGAAGAAAGGGCATTTTCAT TGGTCGTTCATTTTTCTTGGTCGTTCATTGGTCATTCTGTGAATCTATTT TATTGAAATTTGTTTCAATTTGGTTTTTCAATCAGATCAACGCGGCTGTA CTGAAATATGAGGAGTACATAATTTACTCCTTCTTACCGGTGTTTTGATA GATTTAAAAAAAACTCTCTTAGGTGAATTTATTATAGTTGTAATTTGTTA AATTTTTCTTCTTAACCCTTAATTATATACCTGGAAGTTTTAATAACTAA ATTTTATGTGCTAAGCCACCTTTTATGTTGAAAATTGAAAAATGTATATC TATCTATCTATCTACTTTTAAAAATTTGATTTATTTTTAATTCGGTACGC ACCAAAGTTAGTCCAATCAATATATTTATTTGTGCTTAATTGCCTTACGG GTTCTTTATTGAATATTAAGATGCATATAAGCAGAATGTCGTATTCTTGA TTATGATTTTGCGGAAATTTTTGTATTCGTTATCATTTTTAGGTATTTAT TGAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012113XLOC_012113Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021600-exon-sc0000390-1575043694:212640..212735TCONS_00021600-exon-sc0000390-1575043694:212640..212735Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:210468..210645TCONS_00021600-exon-sc0000390-1575043694:210468..210645Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:210248..210292TCONS_00021600-exon-sc0000390-1575043694:210248..210292Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:206990..207108TCONS_00021600-exon-sc0000390-1575043694:206990..207108Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:206589..206738TCONS_00021600-exon-sc0000390-1575043694:206589..206738Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:206370..206459TCONS_00021600-exon-sc0000390-1575043694:206370..206459Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:206135..206207TCONS_00021600-exon-sc0000390-1575043694:206135..206207Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:205890..205946TCONS_00021600-exon-sc0000390-1575043694:205890..205946Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:205552..205679TCONS_00021600-exon-sc0000390-1575043694:205552..205679Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1575043694:204679..205377TCONS_00021600-exon-sc0000390-1575043694:204679..205377Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:212640..212735TCONS_00021600-exon-sc0000390-1510915933:212640..212735Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:210468..210645TCONS_00021600-exon-sc0000390-1510915933:210468..210645Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:210248..210292TCONS_00021600-exon-sc0000390-1510915933:210248..210292Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:206990..207108TCONS_00021600-exon-sc0000390-1510915933:206990..207108Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:206589..206738TCONS_00021600-exon-sc0000390-1510915933:206589..206738Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:206370..206459TCONS_00021600-exon-sc0000390-1510915933:206370..206459Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:206135..206207TCONS_00021600-exon-sc0000390-1510915933:206135..206207Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:205890..205946TCONS_00021600-exon-sc0000390-1510915933:205890..205946Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:205552..205679TCONS_00021600-exon-sc0000390-1510915933:205552..205679Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1510915933:204679..205377TCONS_00021600-exon-sc0000390-1510915933:204679..205377Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:212640..212735TCONS_00021600-exon-sc0000390-1491911889:212640..212735Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:210468..210645TCONS_00021600-exon-sc0000390-1491911889:210468..210645Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:210248..210292TCONS_00021600-exon-sc0000390-1491911889:210248..210292Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:206990..207108TCONS_00021600-exon-sc0000390-1491911889:206990..207108Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:206589..206738TCONS_00021600-exon-sc0000390-1491911889:206589..206738Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:206370..206459TCONS_00021600-exon-sc0000390-1491911889:206370..206459Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:206135..206207TCONS_00021600-exon-sc0000390-1491911889:206135..206207Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:205890..205946TCONS_00021600-exon-sc0000390-1491911889:205890..205946Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:205552..205679TCONS_00021600-exon-sc0000390-1491911889:205552..205679Clytia hemisphaericaexon
TCONS_00021600-exon-sc0000390-1491911889:204679..205377TCONS_00021600-exon-sc0000390-1491911889:204679..205377Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000390supercontigsc0000390:204679..212735 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4209 0.193242 0.146112 0.147176 0 0 0 1.28113 0.492764 0.0727928 1.46472e-07 1.20581 0.264708 0.0547489 0.546649 0.196661 0 0.116422 0.000301985 0.2691 0.51954 0.282798 5.80571 6.97696 0 0 2.683 5.01757 24.9058 10.3543
Blast
BLAST of TCONS_00021600 vs. Swiss-Prot (Human)
Match: FACR2 (Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 5.419e-80
Identity = 134/360 (37.22%), Postives = 213/360 (59.17%), Query Frame = 2
Query:    2 STAYSQCNQEKAIMERFYPVTIEPGRILEAMEWMNDEMLAGFTEPLIDKYPNTYTFTKALAEHLIKKESENIPFMIVRPXXXXXXXXDPFPGWVDNYNGVSGIVVAISRGLLRSMHVPTVIKHDIVPVDYVSNCIITSTWYYATSRDKQPLICNCTSSGVNPTSFCDLGNMVNDFYTYDN-PLNCIIRRPNFKVT-NRYMNQYWQVFSHYLPAIILDGLSIITGSKPRFMNIYRTIDTSLTTLDYFIQNQWKWGNHNQQKILKAIPEDEVEVYDFDMRKIVWKTYYQEMMTGIKLYLVKEDQSELPKARSTHRRYKMVRWLSSTIFILLAGRFFFLKSERFRKLWFEALFSIYKFLHLLR 1075
            STAYS CN  K I E  YP  +EP +I++++EW++D ++   T  LI  +PN YT+TKAL E ++++ES N+   I+RPSIV ++  +PFPGWVDN NG +GI++A  +G LR++    +   D++PVD V N ++   WY A  R K  L+ + TS  +NP ++  +G  V    T++  P     RRPN   T N + +QYW   SH  PAII D    +TG KPR   +   +  +++ L+YFI   W+W  +N + ++  +  ++  V++FD+R++ W  Y +  + G+K YL+KED + +PKA+   +R + + +L +T   L+A R    +S+  R +WF  +   YKFL   R
Sbjct:  152 STAYSNCNL-KHIDEVIYPCPVEPKKIIDSLEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITSGNMNPCNWHKMG--VQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAPAIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRLLIARSQMARNVWFFIVSFCYKFLSYFR 508          
The following BLAST results are available for this feature:
BLAST of TCONS_00021600 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FACR25.419e-8037.22Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2... [more]
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