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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021562 ID=TCONS_00021562|Name=TCONS_00021562|organism=Clytia hemisphaerica|type=transcript|length=1763bp aaaagataaaaaagatacaaaaatatGAAGCAGAAAAATCCAGCTTATGC TGGAATGTCACGATCAGAGCTCATGGTCATGACTGTTACTGACATCATAA GCCAGTTGATAGCTGCTCACGAGAGAAAAGAAGACATCAATCTAAATAAA CTCAAGAATGCAGTGTCCAGGAAGTATGGATTGTCTACTCAACCAAGACT TGTTGATATCATTGCAGCAGTTCCAGCTAATTATCGTAAAGTCTTGGTTC CTAAATTGAAAGCAAAACCAGTGAGAACTGCATCAGGTATTGCAGTGGTA GCAGTGATGTGTAAGCCACACAGGTGCCCCCACATCAATATGACTGGAAA CATTTGCGTCTACTGTCCTGGTGGTCCTGATTCTGATTTCGAATATTCAA CACAGTCGTACACAGGCTATGAACCAACATCAATGCGTGCCATCCGGGCT AGATACAATCCCTTCTTACAGACGAGGCACCGTGTGGAGCAATTAAAATC TTTAGGACATAGTGTGGATAAAGTGGAATTTATAGTCATGGGTGGAACGT TCATGGCTTTGGATGAAGAGTATCGTGATTATTTTATCCGGAATCTCCAC GATGCACTGTCCGGACATACAAGTAGCAGTGTTGAAGAAGCTGTCCGATA TTCAGAGAAAAGCAAAACAAAGTGCATAGGGATTACAATCGAAACACGAC CCGATTATTGCTTGAAACGTCACTTGAGTTCTATGCTTCAATATGGGTGT ACAAGACTGGAAATCGGTGTTCAAAGTGTTTACGAAGATGTTGCACGTGA TACTAACAGAGGTCACACAGTAAAAGCAGTTTGTGAATCATTTCATTTGG GCAAAGATTCTGGATACAAAGTCATCGCACACATGATGCCTGACCTCCCA AATGTTGACTTAGAACGGGACATTGAACAGTTTATCGAATTCTTTGAGAA TCCGGCATTCCGAGCGGATGGTCTAAAAATCTATCCCACATTGGTCATTC GTGGTACTGGTTTGTACGAGTTGTGGAAAACTGGACGCTATAAAAGTTAC TCACCGAACACGCTTATTGATCTTGTAGCACGTATATTAGCTCTGGTTCC ACCGTGGACCAGGATTTACCGTGTACAGCGTGATATTCCAATGCCACTGG TCACTTCGGGTGTTGAACACGGCAATTTAAGGGAGTTGGCACTTGCTAGG ATGAAAGATTTTGGAACTGAgTGCCGTGATGTGCGTACCCGTGAGGTTGG AATACAAgaaattcacaaaaatattcGCCCTTATGAAATCGAACTGATAC GAAGAGATTATTTTGCAAATGGAGGATGGGAGACGTTTTTGTCTTACGAA GATCCTGCGCAAGACATTCTTGTCGGTTTACTGCGATTACGGAAATGTTC GAAAGAAGTATTCCGACCGGAGCTGAAAGGTGAACAATGTTCCATCGTCC GCGAATTGCACGTCTATGGGAGTGTCGTTCCTGTAAGGTCACGTGATCCG ACCAAATTCCAACATCAGGGTTTTGGCACACTTCTAATGGAAGAAGCGGC CCGGATAGCCCGCGAGGAACATTTTTCGACCAAGATAGCTGTCATTTCTG GCGTAGGCACTCGAGACTATTATCGTAAACTTGGCTATGAACTCGATGGA CCTTACATGTCGAGAAAATTGACTGATTTTGAAGATGATTGATAGCCACG GGAATAAAGTTTTCAATTCTTTGTTTCTATATTTTTATatctcaaaaata aaatacaattaTC Run BLAST on NCBI protein sequence of TCONS_00021562-protein >TCONS_00021562-protein ID=TCONS_00021562-protein|Name=TCONS_00021562-protein|organism=Clytia hemisphaerica|type=polypeptide|length=555bp
MKQKNPAYAGMSRSELMVMTVTDIISQLIAAHERKEDINLNKLKNAVSRK YGLSTQPRLVDIIAAVPANYRKVLVPKLKAKPVRTASGIAVVAVMCKPHR CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQT RHRVEQLKSLGHSVDKVEFIVMGGTFMALDEEYRDYFIRNLHDALSGHTS SSVEEAVRYSEKSKTKCIGITIETRPDYCLKRHLSSMLQYGCTRLEIGVQ SVYEDVARDTNRGHTVKAVCESFHLGKDSGYKVIAHMMPDLPNVDLERDI EQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRYKSYSPNTLIDL VARILALVPPWTRIYRVQRDIPMPLVTSGVEHGNLRELALARMKDFGTEC RDVRTREVGIQEIHKNIRPYEIELIRRDYFANGGWETFLSYEDPAQDILV GLLRLRKCSKEVFRPELKGEQCSIVRELHVYGSVVPVRSRDPTKFQHQGF GTLLMEEAARIAREEHFSTKIAVISGVGTRDYYRKLGYELDGPYMSRKLT DFEDD Run BLAST on NCBI transcript from alignment at sc0000389:203858..208004- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021562 ID=TCONS_00021562|Name=TCONS_00021562|organism=Clytia hemisphaerica|type=transcript|length=4147bp|location=Sequence derived from alignment at sc0000389:203858..208004- (Clytia hemisphaerica) AAAAGATAAAAAAGATACAAAAATATGAAGCAGAAAAATCCAGCTTATGC
TGGAATGTCACGATCAGAGCTCATGGTCATGACTGTTACTGACATCATAA
GCCAGTTGATAGCTGCTCACGAGAGAAAAGAAGACATCAATCTAAATAAA
CTCAAGAATGCAGTGTCCAGGAAGTATGGATTGTCTACTCAACCAAGACT
TGTTGATATCATTGCAGCAGTTCCAGCTAATTATCGTAAAGTCTTGGTTC
CTAAATTGAAAGCAAAACCAGTGAGAACTGCATCAGGTGTAAGTCAAAAT
CCTTTACTTTTAAAGCTATTTCCTAAGTATGAAAATAAATGCTAACTTTG
GGGGCTTTCATTGATGTTTCGTAGTAATAACAGTACCTATATTATATTCA
AATTGATGTTTTCTTCACTTGACAATGTTACAAACGAAACAGTTGGTCGG
AGAAAAGAATGATAAAGTTTTGAATTTTCTAACTACAAAAAATCATTTTA
GGACTTCCTTTTATTACATTTTCTTTATGTAGATTGCAGTGGTAGCAGTG
ATGTGTAAGCCACACAGGTGCCCCCACATCAATATGACTGGAAACATTTG
CGTCTACTGTCCTGGTGGTCCTGATTCTGATTTCGAATATTCAACACAGT
CGTACACAGGCTATGAACCAACATCAATGCGTGCCATCCGGGCTAGATAC
AATCCCTTCTTACAGACGAGGCACCGTGTGGAGCAATTAAAATCTTTAGG
ACATAGTGTGGATAAAGTGGAATTTATAGTCATGGGTGGAACGTTCATGG
CTTTGGATGAAGAGTATCGTGATTATTTTATCCGGAATCTCCACGATGCA
CTGTCCGGACATACAAGTAGCAGTGTTGAAGAAGCTGTCCGGTAAGTCTT
TGAAAAAGTTGCTGACTCGCGCTGAACTAATTTTGTTTAAATCCTAGGTT
TGTTAATTTCTTATGCACTCAATGTAACAGCTTCATCGAATTCGCAAGGC
TAGTTTAGCTTATCATCTCCACTTTTCACGTAGAAGCAGAAATTATAGTG
GAAGCAAATAATTTTCATTCTATTTTCAGATATTCAGAGAAAAGCAAAAC
AAAGTGCATAGGGATTACAATCGAAACACGACCCGATTATTGCTTGAAAC
GTCACTTGAGTTCTATGCTTCAATATGGGTGTACAAGACTGGAAATCGGT
GTTCAAAGTGTTTACGAAGATGTTGCACGTGATACTAACAGGTGATAAAA
TCAATTAACCTTTGAAGAAACTCTGTAAGCCTAATAATAATCGGCGGATA
ATCGGCGTGGGGGAGGTAGAAAAATGAGGGAGATGGCCAGAGTATGCATT
ACAAAGCTCCGCCTGCTTCAAAATAGCTTTCTTAAAAAAAACTAACTGAA
CAGAAATTGAAAAACTTAACCTCGATAATACCCTTTGAAGAAACTTTGAA
AGCCAGGGGGAGAGTTGGCGTAGTGGGAGGTGGGAAAGTGGTGGTCAGAG
TATGCATTACAAAGCTCCGCTGCTTCAAAATAGCTTTCAAAAAAGAACTA
ACTGAATGGAAATTAAATATAAAGCTACTACACTTGATCTTGGTTTCTAG
AAAGGAATGTTTAAAGCGTGTTCAATGAATTGTCTATTATAAGACCTACA
CTGTGTTTTTAAGTGTCAGAAAAAAAGCTCTATTTGTTTTCAGATACAGA
GGATCGGTTATTCATTTCGTTGACCATTTCAAAATCTTAATTGTCTTTCT
CAGATCGTTCCCACCAAATATTTTGTTCAAAAGCTGTATGGGGTAGTTGT
GAAAATGTAAAATACTCCATCGAAATTCAATTTCAACTTTTTTCTTTCTT
TTTTCTCTCACCAGAGGTCACACAGTAAAAGCAGTTTGTGAATCATTTCA
TTTGGGCAAAGATTCTGGATACAAAGTCATCGCACACATGATGCCTGACC
TCCCAAATGTTGACTTAGAACGGGACATTGAACAGTTTATCGAATTCTTT
GAGAATCCGGCATTCCGAGCGGATGGTCTAAAAATCTATCCCACATTGGT
CATTCGTGGTACTGGTTTGTACGAGTTGTGGAAAACTGGACGCTATAAAA
GTTACTCACCGAACACGCTTATTGATCTTGTAGCACGTATATTAGCTCTG
GTTCCACCGTGGACCAGGATTTACCGTGTACAGCGTGATATTCCAATGCC
ACTGGTCACTTCGGGTGTTGAACACGGCAATTTAAGGGAGTTGGCACTTG
CTAGGATGAAAGATTTTGGAACTGAGGTATTTTTATCATGTTTTATCATT
TTTTCATTTAATTTACCAATTGGGTCCTACTTTTCTTGGTTCGTTGGACT
ATTAAAGGGAAAACTGGATAAAATTGGTAATAAATAATCTAAATTTGATT
TTATTGTTCGAGAAAATTTTCTTGTACAATCTGACTCAAATTAGTAAACG
CGATCTCTTTCAACAATATTTTTAAAATTCCCTCACAAAACCTGAATATT
GTAGACTGTGGCAGAGTGCCGGTTGTTCCAGGCTATCAGTTTTATTCTGC
TCTTTAGTGCCGTGATGTGCGTACCCGTGAGGTTGGAATACAAGAAATTC
ACAAAAATATTCGCCCTTATGAAATCGAACTGATACGAAGAGATTATTTT
GCAAATGGAGGTAGTTATATATTTCATTTGGTTTTGACTTTAAAACCAAT
TCCTATTTTTGTTTTTGCATTTTTAAACTGAATGAACAATTACATTTATT
GGTTTTTCTGAACATCAGCCACGATCAAGAAGGCGAGAATCCTCGTAATG
GTACGAACGTTCGCTTCGATTTTACTTTCCTACGCTCTTTATTTGAAAAC
TCGTTACATTGAGTTCTAGAAACAAGCATTTGTCTCTTTTGCCACTTTCA
ATGTTATTTCAAATTCTACAACCTCATACTTTTTCCTCTAATTGTGTGTA
ACTCCGTCAGACAAATTTCTGGCCTTTCCTGCTACCGGATAACGGTGGCA
GAAACTCAATCTTTGCTTGAATTTTGAAACTCGATCCTAATTTTGTACAT
GAGCTATGAGAATCAAGACAAAAATTTGATGTCCTAGGCCCTTATTAACA
GAAAAAGCCCATTCTCAGGTTAATTCTTTGTGTTTTAATAGTTCTCAACT
AATTAAACAGAGCCTGGTTTGATTATTTTGTTCTTCGAACTGAATTCAAA
CTCAATCTTTGAAATAAAAACGGTAGCAGCTCAAACACCTGGAAATTTGC
CTGTACCGTAGCTCAAATGTAAGCGCACCTTTTCACATAGGATGGGAGAC
GTTTTTGTCTTACGAAGATCCTGCGCAAGACATTCTTGTCGGTTTACTGC
GATTACGGAAATGTTCGAAAGAAGTATTCCGACCGGAGCTGAAAGGTGAA
CAATGTTCCATCGTCCGCGAATTGCACGTCTATGGGAGTGTCGTTCCTGT
AAGGTCACGTGATCCGACCAAATTCCAACATCAGGTGAATTGAGATTTTG
AGTGCTTTCCTGAAAATTTAAAAGAGTCTATTTTCAACTTTGACCTTAAA
GTTAAGACTGGGGAGAAGGTAAAGTTGATGCCCTTTAAATTGGAAGTTGT
ACTATTTAATAACCTGCCGTTTTTTATCAAATCGATGGTCACTGCTAAAT
TTTTTCAAACTCTAATATTATTTTCCAATTTGTCGGTTTTTGCTTATCTG
ATTCGTATTCTTATTTATCAAAATTGGTGAAATCAATTTATGTTCTTATA
TACCTAGTTCTTATATATAAAAACGTGTGGATTTTCTTGGTTCCAAAAAC
TTCTTTTCTAACATCGGCATTAAGCAATTTATTCTCTGTAATTTTTTAGG
GTTNACATCAGTATTCGATAGCATTGAGTAATTTATTCTCTGTAATTTTT
AGGGTTTTGGCACACTTCTAATGGAAGAAGCGGCCCGGATAGCCCGCGAG
GAACATTTTTCGACCAAGATAGCTGTCATTTCTGGCGTAGGCACTCGAGA
CTATTATCGTAAACTTGGCTATGAACTCGATGGACCTTACATGTCGAGAA
AATTGACTGATTTTGAAGATGATTGATAGCCACGGGAATAAAGTTTTCAA
TTCTTTGTTTCTATATTTTTATATCTCAAAAATAAAATACAATTATC Coding sequence (CDS) from alignment at sc0000389:203858..208004- >TCONS_00021562 ID=TCONS_00021562|Name=TCONS_00021562|organism=Clytia hemisphaerica|type=CDS|length=11676bp|location=Sequence derived from alignment at sc0000389:203858..208004- (Clytia hemisphaerica) GGTTTTGGCACACTTCTAATGGAAGAAGCGGCCCGGATAGCCCGCGAGGA ACATTTTTCGACCAAGATAGCTGTCATTTCTGGCGTAGGCACTCGAGACT ATTATCGTAAACTTGGCTATGAACTCGATGGACCTTACATGTCGAGAAAA TTGACTGATTTTGAAGATGATTGAGATGGGAGACGTTTTTGTCTTACGAA GATCCTGCGCAAGACATTCTTGTCGGTTTACTGCGATTACGGAAATGTTC GAAAGAAGTATTCCGACCGGAGCTGAAAGGTGAACAATGTTCCATCGTCC GCGAATTGCACGTCTATGGGAGTGTCGTTCCTGTAAGGTCACGTGATCCG ACCAAATTCCAACATCAGTGCCGTGATGTGCGTACCCGTGAGGTTGGAAT ACAAGAAATTCACAAAAATATTCGCCCTTATGAAATCGAACTGATACGAA GAGATTATTTTGCAAATGGAGAGGTCACACAGTAAAAGCAGTTTGTGAAT CATTTCATTTGGGCAAAGATTCTGGATACAAAGTCATCGCACACATGATG CCTGACCTCCCAAATGTTGACTTAGAACGGGACATTGAACAGTTTATCGA ATTCTTTGAGAATCCGGCATTCCGAGCGGATGGTCTAAAAATCTATCCCA CATTGGTCATTCGTGGTACTGGTTTGTACGAGTTGTGGAAAACTGGACGC TATAAAAGTTACTCACCGAACACGCTTATTGATCTTGTAGCACGTATATT AGCTCTGGTTCCACCGTGGACCAGGATTTACCGTGTACAGCGTGATATTC CAATGCCACTGGTCACTTCGGGTGTTGAACACGGCAATTTAAGGGAGTTG GCACTTGCTAGGATGAAAGATTTTGGAACTGAGATATTCAGAGAAAAGCA AAACAAAGTGCATAGGGATTACAATCGAAACACGACCCGATTATTGCTTG AAACGTCACTTGAGTTCTATGCTTCAATATGGGTGTACAAGACTGGAAAT CGGTGTTCAAAGTGTTTACGAAGATGTTGCACGTGATACTAACAGATTGC AGTGGTAGCAGTGATGTGTAAGCCACACAGGTGCCCCCACATCAATATGA CTGGAAACATTTGCGTCTACTGTCCTGGTGGTCCTGATTCTGATTTCGAA TATTCAACACAGTCGTACACAGGCTATGAACCAACATCAATGCGTGCCAT CCGGGCTAGATACAATCCCTTCTTACAGACGAGGCACCGTGTGGAGCAAT TAAAATCTTTAGGACATAGTGTGGATAAAGTGGAATTTATAGTCATGGGT GGAACGTTCATGGCTTTGGATGAAGAGTATCGTGATTATTTTATCCGGAA TCTCCACGATGCACTGTCCGGACATACAAGTAGCAGTGTTGAAGAAGCTG TCCGATGAAGCAGAAAAATCCAGCTTATGCTGGAATGTCACGATCAGAGC TCATGGTCATGACTGTTACTGACATCATAAGCCAGTTGATAGCTGCTCAC GAGAGAAAAGAAGACATCAATCTAAATAAACTCAAGAATGCAGTGTCCAG GAAGTATGGATTGTCTACTCAACCAAGACTTGTTGATATCATTGCAGCAG TTCCAGCTAATTATCGTAAAGTCTTGGTTCCTAAATTGAAAGCAAAACCA GTGAGAACTGCATCAGGTGGTTTTGGCACACTTCTAATGGAAGAAGCGGC CCGGATAGCCCGCGAGGAACATTTTTCGACCAAGATAGCTGTCATTTCTG GCGTAGGCACTCGAGACTATTATCGTAAACTTGGCTATGAACTCGATGGA CCTTACATGTCGAGAAAATTGACTGATTTTGAAGATGATTGAGATGGGAG ACGTTTTTGTCTTACGAAGATCCTGCGCAAGACATTCTTGTCGGTTTACT GCGATTACGGAAATGTTCGAAAGAAGTATTCCGACCGGAGCTGAAAGGTG AACAATGTTCCATCGTCCGCGAATTGCACGTCTATGGGAGTGTCGTTCCT GTAAGGTCACGTGATCCGACCAAATTCCAACATCAGTGCCGTGATGTGCG TACCCGTGAGGTTGGAATACAAGAAATTCACAAAAATATTCGCCCTTATG AAATCGAACTGATACGAAGAGATTATTTTGCAAATGGAGAGGTCACACAG TAAAAGCAGTTTGTGAATCATTTCATTTGGGCAAAGATTCTGGATACAAA GTCATCGCACACATGATGCCTGACCTCCCAAATGTTGACTTAGAACGGGA CATTGAACAGTTTATCGAATTCTTTGAGAATCCGGCATTCCGAGCGGATG GTCTAAAAATCTATCCCACATTGGTCATTCGTGGTACTGGTTTGTACGAG TTGTGGAAAACTGGACGCTATAAAAGTTACTCACCGAACACGCTTATTGA TCTTGTAGCACGTATATTAGCTCTGGTTCCACCGTGGACCAGGATTTACC GTGTACAGCGTGATATTCCAATGCCACTGGTCACTTCGGGTGTTGAACAC GGCAATTTAAGGGAGTTGGCACTTGCTAGGATGAAAGATTTTGGAACTGA GATATTCAGAGAAAAGCAAAACAAAGTGCATAGGGATTACAATCGAAACA CGACCCGATTATTGCTTGAAACGTCACTTGAGTTCTATGCTTCAATATGG GTGTACAAGACTGGAAATCGGTGTTCAAAGTGTTTACGAAGATGTTGCAC GTGATACTAACAGATTGCAGTGGTAGCAGTGATGTGTAAGCCACACAGGT GCCCCCACATCAATATGACTGGAAACATTTGCGTCTACTGTCCTGGTGGT CCTGATTCTGATTTCGAATATTCAACACAGTCGTACACAGGCTATGAACC AACATCAATGCGTGCCATCCGGGCTAGATACAATCCCTTCTTACAGACGA GGCACCGTGTGGAGCAATTAAAATCTTTAGGACATAGTGTGGATAAAGTG GAATTTATAGTCATGGGTGGAACGTTCATGGCTTTGGATGAAGAGTATCG TGATTATTTTATCCGGAATCTCCACGATGCACTGTCCGGACATACAAGTA GCAGTGTTGAAGAAGCTGTCCGATGAAGCAGAAAAATCCAGCTTATGCTG GAATGTCACGATCAGAGCTCATGGTCATGACTGTTACTGACATCATAAGC CAGTTGATAGCTGCTCACGAGAGAAAAGAAGACATCAATCTAAATAAACT CAAGAATGCAGTGTCCAGGAAGTATGGATTGTCTACTCAACCAAGACTTG TTGATATCATTGCAGCAGTTCCAGCTAATTATCGTAAAGTCTTGGTTCCT AAATTGAAAGCAAAACCAGTGAGAACTGCATCAGGTGGTTTTGGCACACT TCTAATGGAAGAAGCGGCCCGGATAGCCCGCGAGGAACATTTTTCGACCA AGATAGCTGTCATTTCTGGCGTAGGCACTCGAGACTATTATCGTAAACTT GGCTATGAACTCGATGGACCTTACATGTCGAGAAAATTGACTGATTTTGA AGATGATTGAGATGGGAGACGTTTTTGTCTTACGAAGATCCTGCGCAAGA CATTCTTGTCGGTTTACTGCGATTACGGAAATGTTCGAAAGAAGTATTCC GACCGGAGCTGAAAGGTGAACAATGTTCCATCGTCCGCGAATTGCACGTC TATGGGAGTGTCGTTCCTGTAAGGTCACGTGATCCGACCAAATTCCAACA TCAGTGCCGTGATGTGCGTACCCGTGAGGTTGGAATACAAGAAATTCACA AAAATATTCGCCCTTATGAAATCGAACTGATACGAAGAGATTATTTTGCA AATGGAGAGGTCACACAGTAAAAGCAGTTTGTGAATCATTTCATTTGGGC AAAGATTCTGGATACAAAGTCATCGCACACATGATGCCTGACCTCCCAAA TGTTGACTTAGAACGGGACATTGAACAGTTTATCGAATTCTTTGAGAATC CGGCATTCCGAGCGGATGGTCTAAAAATCTATCCCACATTGGTCATTCGT GGTACTGGTTTGTACGAGTTGTGGAAAACTGGACGCTATAAAAGTTACTC ACCGAACACGCTTATTGATCTTGTAGCACGTATATTAGCTCTGGTTCCAC CGTGGACCAGGATTTACCGTGTACAGCGTGATATTCCAATGCCACTGGTC ACTTCGGGTGTTGAACACGGCAATTTAAGGGAGTTGGCACTTGCTAGGAT GAAAGATTTTGGAACTGAGATATTCAGAGAAAAGCAAAACAAAGTGCATA GGGATTACAATCGAAACACGACCCGATTATTGCTTGAAACGTCACTTGAG TTCTATGCTTCAATATGGGTGTACAAGACTGGAAATCGGTGTTCAAAGTG TTTACGAAGATGTTGCACGTGATACTAACAGATTGCAGTGGTAGCAGTGA TGTGTAAGCCACACAGGTGCCCCCACATCAATATGACTGGAAACATTTGC GTCTACTGTCCTGGTGGTCCTGATTCTGATTTCGAATATTCAACACAGTC GTACACAGGCTATGAACCAACATCAATGCGTGCCATCCGGGCTAGATACA ATCCCTTCTTACAGACGAGGCACCGTGTGGAGCAATTAAAATCTTTAGGA CATAGTGTGGATAAAGTGGAATTTATAGTCATGGGTGGAACGTTCATGGC TTTGGATGAAGAGTATCGTGATTATTTTATCCGGAATCTCCACGATGCAC TGTCCGGACATACAAGTAGCAGTGTTGAAGAAGCTGTCCGATGAAGCAGA AAAATCCAGCTTATGCTGGAATGTCACGATCAGAGCTCATGGTCATGACT GTTACTGACATCATAAGCCAGTTGATAGCTGCTCACGAGAGAAAAGAAGA CATCAATCTAAATAAACTCAAGAATGCAGTGTCCAGGAAGTATGGATTGT CTACTCAACCAAGACTTGTTGATATCATTGCAGCAGTTCCAGCTAATTAT CGTAAAGTCTTGGTTCCTAAATTGAAAGCAAAACCAGTGAGAACTGCATC AGGTGGTTTTGGCACACTTCTAATGGAAGAAGCGGCCCGGATAGCCCGCG AGGAACATTTTTCGACCAAGATAGCTGTCATTTCTGGCGTAGGCACTCGA GACTATTATCGTAAACTTGGCTATGAACTCGATGGACCTTACATGTCGAG AAAATTGACTGATTTTGAAGATGATTGAGATGGGAGACGTTTTTGTCTTA CGAAGATCCTGCGCAAGACATTCTTGTCGGTTTACTGCGATTACGGAAAT GTTCGAAAGAAGTATTCCGACCGGAGCTGAAAGGTGAACAATGTTCCATC GTCCGCGAATTGCACGTCTATGGGAGTGTCGTTCCTGTAAGGTCACGTGA TCCGACCAAATTCCAACATCAGTGCCGTGATGTGCGTACCCGTGAGGTTG GAATACAAGAAATTCACAAAAATATTCGCCCTTATGAAATCGAACTGATA CGAAGAGATTATTTTGCAAATGGAGAGGTCACACAGTAAAAGCAGTTTGT GAATCATTTCATTTGGGCAAAGATTCTGGATACAAAGTCATCGCACACAT GATGCCTGACCTCCCAAATGTTGACTTAGAACGGGACATTGAACAGTTTA TCGAATTCTTTGAGAATCCGGCATTCCGAGCGGATGGTCTAAAAATCTAT CCCACATTGGTCATTCGTGGTACTGGTTTGTACGAGTTGTGGAAAACTGG ACGCTATAAAAGTTACTCACCGAACACGCTTATTGATCTTGTAGCACGTA TATTAGCTCTGGTTCCACCGTGGACCAGGATTTACCGTGTACAGCGTGAT ATTCCAATGCCACTGGTCACTTCGGGTGTTGAACACGGCAATTTAAGGGA GTTGGCACTTGCTAGGATGAAAGATTTTGGAACTGAGATATTCAGAGAAA AGCAAAACAAAGTGCATAGGGATTACAATCGAAACACGACCCGATTATTG CTTGAAACGTCACTTGAGTTCTATGCTTCAATATGGGTGTACAAGACTGG AAATCGGTGTTCAAAGTGTTTACGAAGATGTTGCACGTGATACTAACAGA TTGCAGTGGTAGCAGTGATGTGTAAGCCACACAGGTGCCCCCACATCAAT ATGACTGGAAACATTTGCGTCTACTGTCCTGGTGGTCCTGATTCTGATTT CGAATATTCAACACAGTCGTACACAGGCTATGAACCAACATCAATGCGTG CCATCCGGGCTAGATACAATCCCTTCTTACAGACGAGGCACCGTGTGGAG CAATTAAAATCTTTAGGACATAGTGTGGATAAAGTGGAATTTATAGTCAT GGGTGGAACGTTCATGGCTTTGGATGAAGAGTATCGTGATTATTTTATCC GGAATCTCCACGATGCACTGTCCGGACATACAAGTAGCAGTGTTGAAGAA GCTGTCCGATGAAGCAGAAAAATCCAGCTTATGCTGGAATGTCACGATCA GAGCTCATGGTCATGACTGTTACTGACATCATAAGCCAGTTGATAGCTGC TCACGAGAGAAAAGAAGACATCAATCTAAATAAACTCAAGAATGCAGTGT CCAGGAAGTATGGATTGTCTACTCAACCAAGACTTGTTGATATCATTGCA GCAGTTCCAGCTAATTATCGTAAAGTCTTGGTTCCTAAATTGAAAGCAAA ACCAGTGAGAACTGCATCAGGTGGTTTTGGCACACTTCTAATGGAAGAAG CGGCCCGGATAGCCCGCGAGGAACATTTTTCGACCAAGATAGCTGTCATT TCTGGCGTAGGCACTCGAGACTATTATCGTAAACTTGGCTATGAACTCGA TGGACCTTACATGTCGAGAAAATTGACTGATTTTGAAGATGATTGAGATG GGAGACGTTTTTGTCTTACGAAGATCCTGCGCAAGACATTCTTGTCGGTT TACTGCGATTACGGAAATGTTCGAAAGAAGTATTCCGACCGGAGCTGAAA GGTGAACAATGTTCCATCGTCCGCGAATTGCACGTCTATGGGAGTGTCGT TCCTGTAAGGTCACGTGATCCGACCAAATTCCAACATCAGTGCCGTGATG TGCGTACCCGTGAGGTTGGAATACAAGAAATTCACAAAAATATTCGCCCT TATGAAATCGAACTGATACGAAGAGATTATTTTGCAAATGGAGAGGTCAC ACAGTAAAAGCAGTTTGTGAATCATTTCATTTGGGCAAAGATTCTGGATA CAAAGTCATCGCACACATGATGCCTGACCTCCCAAATGTTGACTTAGAAC GGGACATTGAACAGTTTATCGAATTCTTTGAGAATCCGGCATTCCGAGCG GATGGTCTAAAAATCTATCCCACATTGGTCATTCGTGGTACTGGTTTGTA CGAGTTGTGGAAAACTGGACGCTATAAAAGTTACTCACCGAACACGCTTA TTGATCTTGTAGCACGTATATTAGCTCTGGTTCCACCGTGGACCAGGATT TACCGTGTACAGCGTGATATTCCAATGCCACTGGTCACTTCGGGTGTTGA ACACGGCAATTTAAGGGAGTTGGCACTTGCTAGGATGAAAGATTTTGGAA CTGAGATATTCAGAGAAAAGCAAAACAAAGTGCATAGGGATTACAATCGA AACACGACCCGATTATTGCTTGAAACGTCACTTGAGTTCTATGCTTCAAT ATGGGTGTACAAGACTGGAAATCGGTGTTCAAAGTGTTTACGAAGATGTT GCACGTGATACTAACAGATTGCAGTGGTAGCAGTGATGTGTAAGCCACAC AGGTGCCCCCACATCAATATGACTGGAAACATTTGCGTCTACTGTCCTGG TGGTCCTGATTCTGATTTCGAATATTCAACACAGTCGTACACAGGCTATG AACCAACATCAATGCGTGCCATCCGGGCTAGATACAATCCCTTCTTACAG ACGAGGCACCGTGTGGAGCAATTAAAATCTTTAGGACATAGTGTGGATAA AGTGGAATTTATAGTCATGGGTGGAACGTTCATGGCTTTGGATGAAGAGT ATCGTGATTATTTTATCCGGAATCTCCACGATGCACTGTCCGGACATACA AGTAGCAGTGTTGAAGAAGCTGTCCGATGAAGCAGAAAAATCCAGCTTAT GCTGGAATGTCACGATCAGAGCTCATGGTCATGACTGTTACTGACATCAT AAGCCAGTTGATAGCTGCTCACGAGAGAAAAGAAGACATCAATCTAAATA AACTCAAGAATGCAGTGTCCAGGAAGTATGGATTGTCTACTCAACCAAGA CTTGTTGATATCATTGCAGCAGTTCCAGCTAATTATCGTAAAGTCTTGGT TCCTAAATTGAAAGCAAAACCAGTGAGAACTGCATCAGGTGGTTTTGGCA CACTTCTAATGGAAGAAGCGGCCCGGATAGCCCGCGAGGAACATTTTTCG ACCAAGATAGCTGTCATTTCTGGCGTAGGCACTCGAGACTATTATCGTAA ACTTGGCTATGAACTCGATGGACCTTACATGTCGAGAAAATTGACTGATT TTGAAGATGATTGAGATGGGAGACGTTTTTGTCTTACGAAGATCCTGCGC AAGACATTCTTGTCGGTTTACTGCGATTACGGAAATGTTCGAAAGAAGTA TTCCGACCGGAGCTGAAAGGTGAACAATGTTCCATCGTCCGCGAATTGCA CGTCTATGGGAGTGTCGTTCCTGTAAGGTCACGTGATCCGACCAAATTCC AACATCAGTGCCGTGATGTGCGTACCCGTGAGGTTGGAATACAAGAAATT CACAAAAATATTCGCCCTTATGAAATCGAACTGATACGAAGAGATTATTT TGCAAATGGAGAGGTCACACAGTAAAAGCAGTTTGTGAATCATTTCATTT GGGCAAAGATTCTGGATACAAAGTCATCGCACACATGATGCCTGACCTCC CAAATGTTGACTTAGAACGGGACATTGAACAGTTTATCGAATTCTTTGAG AATCCGGCATTCCGAGCGGATGGTCTAAAAATCTATCCCACATTGGTCAT TCGTGGTACTGGTTTGTACGAGTTGTGGAAAACTGGACGCTATAAAAGTT ACTCACCGAACACGCTTATTGATCTTGTAGCACGTATATTAGCTCTGGTT CCACCGTGGACCAGGATTTACCGTGTACAGCGTGATATTCCAATGCCACT GGTCACTTCGGGTGTTGAACACGGCAATTTAAGGGAGTTGGCACTTGCTA GGATGAAAGATTTTGGAACTGAGATATTCAGAGAAAAGCAAAACAAAGTG CATAGGGATTACAATCGAAACACGACCCGATTATTGCTTGAAACGTCACT TGAGTTCTATGCTTCAATATGGGTGTACAAGACTGGAAATCGGTGTTCAA AGTGTTTACGAAGATGTTGCACGTGATACTAACAGATTGCAGTGGTAGCA GTGATGTGTAAGCCACACAGGTGCCCCCACATCAATATGACTGGAAACAT TTGCGTCTACTGTCCTGGTGGTCCTGATTCTGATTTCGAATATTCAACAC AGTCGTACACAGGCTATGAACCAACATCAATGCGTGCCATCCGGGCTAGA TACAATCCCTTCTTACAGACGAGGCACCGTGTGGAGCAATTAAAATCTTT AGGACATAGTGTGGATAAAGTGGAATTTATAGTCATGGGTGGAACGTTCA TGGCTTTGGATGAAGAGTATCGTGATTATTTTATCCGGAATCTCCACGAT GCACTGTCCGGACATACAAGTAGCAGTGTTGAAGAAGCTGTCCGATGAAG CAGAAAAATCCAGCTTATGCTGGAATGTCACGATCAGAGCTCATGGTCAT GACTGTTACTGACATCATAAGCCAGTTGATAGCTGCTCACGAGAGAAAAG AAGACATCAATCTAAATAAACTCAAGAATGCAGTGTCCAGGAAGTATGGA TTGTCTACTCAACCAAGACTTGTTGATATCATTGCAGCAGTTCCAGCTAA TTATCGTAAAGTCTTGGTTCCTAAATTGAAAGCAAAACCAGTGAGAACTG CATCAGGTGGTTTTGGCACACTTCTAATGGAAGAAGCGGCCCGGATAGCC CGCGAGGAACATTTTTCGACCAAGATAGCTGTCATTTCTGGCGTAGGCAC TCGAGACTATTATCGTAAACTTGGCTATGAACTCGATGGACCTTACATGT CGAGAAAATTGACTGATTTTGAAGATGATTGAGATGGGAGACGTTTTTGT CTTACGAAGATCCTGCGCAAGACATTCTTGTCGGTTTACTGCGATTACGG AAATGTTCGAAAGAAGTATTCCGACCGGAGCTGAAAGGTGAACAATGTTC CATCGTCCGCGAATTGCACGTCTATGGGAGTGTCGTTCCTGTAAGGTCAC GTGATCCGACCAAATTCCAACATCAGTGCCGTGATGTGCGTACCCGTGAG GTTGGAATACAAGAAATTCACAAAAATATTCGCCCTTATGAAATCGAACT GATACGAAGAGATTATTTTGCAAATGGAGAGGTCACACAGTAAAAGCAGT TTGTGAATCATTTCATTTGGGCAAAGATTCTGGATACAAAGTCATCGCAC ACATGATGCCTGACCTCCCAAATGTTGACTTAGAACGGGACATTGAACAG TTTATCGAATTCTTTGAGAATCCGGCATTCCGAGCGGATGGTCTAAAAAT CTATCCCACATTGGTCATTCGTGGTACTGGTTTGTACGAGTTGTGGAAAA CTGGACGCTATAAAAGTTACTCACCGAACACGCTTATTGATCTTGTAGCA CGTATATTAGCTCTGGTTCCACCGTGGACCAGGATTTACCGTGTACAGCG TGATATTCCAATGCCACTGGTCACTTCGGGTGTTGAACACGGCAATTTAA GGGAGTTGGCACTTGCTAGGATGAAAGATTTTGGAACTGAGATATTCAGA GAAAAGCAAAACAAAGTGCATAGGGATTACAATCGAAACACGACCCGATT ATTGCTTGAAACGTCACTTGAGTTCTATGCTTCAATATGGGTGTACAAGA CTGGAAATCGGTGTTCAAAGTGTTTACGAAGATGTTGCACGTGATACTAA CAGATTGCAGTGGTAGCAGTGATGTGTAAGCCACACAGGTGCCCCCACAT CAATATGACTGGAAACATTTGCGTCTACTGTCCTGGTGGTCCTGATTCTG ATTTCGAATATTCAACACAGTCGTACACAGGCTATGAACCAACATCAATG CGTGCCATCCGGGCTAGATACAATCCCTTCTTACAGACGAGGCACCGTGT GGAGCAATTAAAATCTTTAGGACATAGTGTGGATAAAGTGGAATTTATAG TCATGGGTGGAACGTTCATGGCTTTGGATGAAGAGTATCGTGATTATTTT ATCCGGAATCTCCACGATGCACTGTCCGGACATACAAGTAGCAGTGTTGA AGAAGCTGTCCGATGAAGCAGAAAAATCCAGCTTATGCTGGAATGTCACG ATCAGAGCTCATGGTCATGACTGTTACTGACATCATAAGCCAGTTGATAG CTGCTCACGAGAGAAAAGAAGACATCAATCTAAATAAACTCAAGAATGCA GTGTCCAGGAAGTATGGATTGTCTACTCAACCAAGACTTGTTGATATCAT TGCAGCAGTTCCAGCTAATTATCGTAAAGTCTTGGTTCCTAAATTGAAAG CAAAACCAGTGAGAACTGCATCAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00021562-exon-sc0000389-1575043694:207717..208004 | TCONS_00021562-exon-sc0000389-1575043694:207717..208004 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1575043694:207114..207472 | TCONS_00021562-exon-sc0000389-1575043694:207114..207472 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1575043694:206764..206925 | TCONS_00021562-exon-sc0000389-1575043694:206764..206925 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1575043694:205729..206140 | TCONS_00021562-exon-sc0000389-1575043694:205729..206140 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1575043694:205345..205447 | TCONS_00021562-exon-sc0000389-1575043694:205345..205447 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1575043694:204521..204714 | TCONS_00021562-exon-sc0000389-1575043694:204521..204714 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1575043694:203858..204102 | TCONS_00021562-exon-sc0000389-1575043694:203858..204102 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1510915933:207717..208004 | TCONS_00021562-exon-sc0000389-1510915933:207717..208004 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1510915933:207114..207472 | TCONS_00021562-exon-sc0000389-1510915933:207114..207472 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1510915933:206764..206925 | TCONS_00021562-exon-sc0000389-1510915933:206764..206925 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1510915933:205729..206140 | TCONS_00021562-exon-sc0000389-1510915933:205729..206140 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1510915933:205345..205447 | TCONS_00021562-exon-sc0000389-1510915933:205345..205447 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1510915933:204521..204714 | TCONS_00021562-exon-sc0000389-1510915933:204521..204714 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1510915933:203858..204102 | TCONS_00021562-exon-sc0000389-1510915933:203858..204102 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1491911889:207717..208004 | TCONS_00021562-exon-sc0000389-1491911889:207717..208004 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1491911889:207114..207472 | TCONS_00021562-exon-sc0000389-1491911889:207114..207472 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1491911889:206764..206925 | TCONS_00021562-exon-sc0000389-1491911889:206764..206925 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1491911889:205729..206140 | TCONS_00021562-exon-sc0000389-1491911889:205729..206140 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1491911889:205345..205447 | TCONS_00021562-exon-sc0000389-1491911889:205345..205447 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1491911889:204521..204714 | TCONS_00021562-exon-sc0000389-1491911889:204521..204714 | Clytia hemisphaerica | exon |
TCONS_00021562-exon-sc0000389-1491911889:203858..204102 | TCONS_00021562-exon-sc0000389-1491911889:203858..204102 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000389 | supercontig | sc0000389:203858..208004 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0051536 | iron-sulfur cluster binding |
GO:0003824 | catalytic activity |
GO:0008080 | N-acetyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0003824 |
catalytic activity |
molecular_function |
GO:0051536 |
iron-sulfur cluster binding |
molecular_function |
GO:0008080 |
N-acetyltransferase activity |
Blast
BLAST of TCONS_00021562 vs. Swiss-Prot (Human)
Match: ELP3 (Elongator complex protein 3 OS=Homo sapiens GN=ELP3 PE=1 SV=2) HSP 1 Score: 917.531 bits (2370), Expect = 0.000e+0 Identity = 456/549 (83.06%), Postives = 498/549 (90.71%), Query Frame = 1
Query: 25 MKQKNPAYAGMSRSELMVMTVTDIISQLIAAHERKEDINLNKLKNAVSRKYGLSTQPRLVDIIAAVPANYRXXXXXXXXXXXXRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRVEQLKSLGHSVDKVEFIVMGGTFMALDEEYRDYFIRNLHDALSGHTSSSVEEAVRYSEKSKTKCIGITIETRPDYCLKRHLSSMLQYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLGKDSGYKVIAHMMPDLPNVDLERDIEQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRYKSYSPNTLIDLVARILALVPPWTRIYRVQRDIPMPLVTSGVEHGNLRELALARMKDFGTECRDVRTREVGIQEIHKNIRPYEIELIRRDYFANGGWETFLSYEDPAQDILVGLLRLRKCSKEVFRPELKGEQCSIVRELHVYGSVVPVRSRDPTKFQHQGFGTLLMEEAARIAREEHFSTKIAVISGVGTRDYYRKLGYELDGPYMSRKL 1671
M+QK +S +ELM++T+ D+I QLI AHE+ +DI+LNK+K + KYGLS QPRLVDIIAAVP YRKVL+PKLKAKP+RTASGIAVVAVMCKPHRCPHI+ TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARY+PFLQTRHR+EQLK LGHSVDKVEFIVMGGTFMAL EEYRDYFIRNLHDALSGHTS+++ EAV+YSE+S TKCIGITIETRPDYC+KRHLS ML YGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHL KDSG+KV+AHMMPDLPNV LERDIEQF EFFENPAFR DGLK+YPTLVIRGTGLYELWK+GRYKSYSP+ L++LVARILALVPPWTR+YRVQRDIPMPLV+SGVEHGNLRELALARMKD G +CRDVRTREVGIQEIH +RPY++EL+RRDY ANGGWETFLSYEDP QDIL+GLLRLRKCS+E FR EL G SIVRELHVYGSVVPV SRDPTKFQHQGFG LLMEEA RIAREEH S KIAVISGVGTR+YYRK+GY L GPYM + L
Sbjct: 1 MRQKRKG--DLSPAELMMLTIGDVIKQLIEAHEQGKDIDLNKVKTKTAAKYGLSAQPRLVDIIAAVPPQYRKVLMPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKSYSPSDLVELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGIQCRDVRTREVGIQEIHHKVRPYQVELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELGG-GVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKIGYRLQGPYMVKML 546
The following BLAST results are available for this feature:
|