Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002031 ID=TCONS_00002031|Name=TCONS_00002031|organism=Clytia hemisphaerica|type=transcript|length=1278bp
CGGGTAtggccgatttcattacctaactcgagatatttcatgcgcaagtt
ccacttttcgccacattttggtctaaaattgaccaaaaattgcatcttct
tcgtgaattatctcgagttaggtaatgaaatcggctaaatttttgaccct
agggttttgcctggggaaaaaagaaattgcccaaaaaagggatgttccac
cagtgggattttaggggattttttcctgaggcataagcatcctacagaga
aggtctggagaaagtttcagctatatattatttttttcctacaaacagcc
tgtacttttgtaacacgaccacactagtTCCCTTACGGTACTAGATATCT
TTTTAAGATTTGACCCTTATggattttttatcttcaaaacCCTCGGCCTT
CTGGCAGTCTTTCTGCAAGGTTAtattacagtggagtctccgtaactcga
acacCGACGGAGAACACAAACcaaattcgaattaaagaaatttcgagtta
tggagtaaggtttattaGGCATTGTTGGCTGAAGGGATTATAAAACTTGT
TTGGGTTTAGGAGGCTTTCGAGTTAAATAGACTCCAATGTATCTTATTAT
TTCGTCACTATGCAGGAGCACTACTTTATTGGACCCATCTTCGTAAATCA
ATTCTTTTCACCACCGTTTCTGGGGCATTCTTCGTTTGTGGTTAACTTTT
CGGTTTGAGGTGATGAAGCATGTTTCATGTCTTTACGTTGTTTGTGCGTG
CGATTTCTGTATTATATGTTATGTAGTCATCAATGTCATTCAGTAGTTTC
GCTTATTTGATTGGATTgaatttttaatctttaattTGTTTGCTTGTAAG
ATATAAATATTAATCATAAGATTTTGTCGTCatattttgatgtatttttt
atGAGACtctaattcaattcaatttattTCCAACCGACCGGTCTCTCCTC
GCTGGTCTCGGTTAAcgtggaaaattattttttatttgttaattttttta
aagtttctgGTGTAAGTAATAGTAACTATAAACCTATAAATTTCATAATC
AAAATAATTCGAgaagaaaattttcataaaatgaacaagatgaaaatata
atttattaTTATCCCCGAAAAGAAACGCGCCCCTTTTTAGGaccttttga
ttttatttaccCAAATTCTATGACTGATGACTTACGGAAAGCAAAACGTC
AGTCATATCCTCCCTCTATGCTATATGTTGTTTTGACCTCTTATTCAATT
GTAGTATAGTTTTATTCGTTGATTTTTT Run BLAST on NCBI transcript from alignment at sc0000012:1125214..1126491 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002031 ID=TCONS_00002031|Name=TCONS_00002031|organism=Clytia hemisphaerica|type=transcript|length=1278bp|location=Sequence derived from alignment at sc0000012:1125214..1126491 (Clytia hemisphaerica)
AAAAAATCAACGAATAAAACTATACTACAATTGAATAAGAGGTCAAAACA
ACATATAGCATAGAGGGAGGATATGACTGACGTTTTGCTTTCCGTAAGTC
ATCAGTCATAGAATTTGggtaaataaaatcaaaaggtCCTAAAAAGGGGC
GCGTTTCTTTTCGGGGATAAtaataaattatattttcatcttgttcattt
tatgaaaattttcttcTCGAATTATTTTGATTATGAAATTTATAGGTTTA
TAGTTACTATTACTTACACcagaaactttaaaaaaattaacaaataaaaa
ataattttccacgTTAACCGAGACCAGCGAGGAGAGACCGGTCGGTTGGA
aataaattgaattgaattagaGTCTCataaaaaatacatcaaaatatGAC
GACAAAATCTTATGATTAATATTTATATCTTACAAGCAAACAaattaaag
attaaaaattcAATCCAATCAAATAAGCGAAACTACTGAATGACATTGAT
GACTACATAACATATAATACAGAAATCGCACGCACAAACAACGTAAAGAC
ATGAAACATGCTTCATCACCTCAAACCGAAAAGTTAACCACAAACGAAGA
ATGCCCCAGAAACGGTGGTGAAAAGAATTGATTTACGAAGATGGGTCCAA
TAAAGTAGTGCTCCTGCATAGTGACGAAATAATAAGATACATTGGAGTCT
ATTTAACTCGAAAGCCTCCTAAACCCAAACAAGTTTTATAATCCCTTCAG
CCAACAATGCCtaataaaccttactccataactcgaaatttctttaattc
gaatttgGTTTGTGTTCTCCGTCGgtgttcgagttacggagactccactg
taataTAACCTTGCAGAAAGACTGCCAGAAGGCCGAGGgttttgaagata
aaaaatccATAAGGGTCAAATCTTAAAAAGATATCTAGTACCGTAAGGGA
actagtgtggtcgtgttacaaaagtacaggctgtttgtaggaaaaaaata
atatatagctgaaactttctccagaccttctctgtaggatgcttatgcct
caggaaaaaatcccctaaaatcccactggtggaacatcccttttttgggc
aatttcttttttccccaggcaaaaccctagggtcaaaaatttagccgatt
tcattacctaactcgagataattcacgaagaagatgcaatttttggtcaa
ttttagaccaaaatgtggcgaaaagtggaacttgcgcatgaaatatctcg
agttaggtaatgaaatcggccaTACCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002031-exon-sc0000012-1491911889:1125214..1126491 | TCONS_00002031-exon-sc0000012-1491911889:1125214..1126491 | Clytia hemisphaerica | exon |
| TCONS_00002031-exon-sc0000012-1510915933:1125214..1126491 | TCONS_00002031-exon-sc0000012-1510915933:1125214..1126491 | Clytia hemisphaerica | exon |
| TCONS_00002031-exon-sc0000012-1575043694:1125214..1126491 | TCONS_00002031-exon-sc0000012-1575043694:1125214..1126491 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:1125214..1126491 . |
Blast
The following BLAST results are available for this feature:
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