TCONS_00019904 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019904
Unique NameTCONS_00019904
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1867

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019904 ID=TCONS_00019904|Name=TCONS_00019904|organism=Clytia hemisphaerica|type=transcript|length=1867bp
GAAAGTCTCTTCTTTTATATATTTAGTTATaataagaaattgaaaatttg
ctcaTTCGTGGTAAAAAATGGTTTCCAATGTAGCCCAAACGGGTGAAAAT
TCATCTGCTGCTGAAACAAActcaaagaaatcaaagaaaaagtcagGTCC
TCAATATGAATGCGTCATCACATGCTTGGATGGCTCTGTGATCAACACTT
CTGTTGAGaaaTCAGCCAAAGGAGAAGAACTAGTCAATAAAGTAGCTCAA
GAACTTGATGTGAAATCGAAAGATTATGTTGGTCTCCTTTTCAATAATGG
AACAAGGcaatGGTTGGATATTCATAAAGATATGAAACATCAGTTGGGAG
atTCTAAAGCAGAATTTTTATTTCGGGTCAAATTCTATGAGCCTGAGCCC
AGCAAAATTCAAGAAGATCATTTAAGATATTTACTTTATCTCCAGATTAG
AGAAGATTTATCAGAAAAAAGattAAAATGCACAGAAGAAGTAATTGCTC
AACTTGGTGCATATACTGCACAAgcTGAAGTAGGAGACTTCAATTTATCA
GAGCATGAGCATGATTACTTGAAAGATTATGAGTTTGCTGAGAATACCGA
TATACTTGAAAGAATCAATTTATTGCACAAACAACACAGGGGTCAAACAC
CTTTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAAAAGATTCCTAGA
TATGGAGTGGACGTACATGATGCCATGGATACCAATGGGCATGTAGAGAT
TGGTATTGCTGCTTTAGGAATAAACATCTATCGGGATGGAAAGCGTGAAC
AGCTTTTCAGATGGCAAAATATGCATGACTTCAATTACAACCGAAGAAAA
TTCACCATTAAACTCAAACAACCAGTGAGCGACAATGACAATAAGAAGAA
TTACGTATATTATTTCGAATCTGCTAAAAGCTGCAAACAATGCTACAAAG
TGGCTGTTGAATATCATTCTTTCTTCCGATTGACAAGACCTGATGCTCCA
CGAAAACGTGCTGACACCTTGAAAATGGGATCTAGCTTCAGATACAgTGA
TCGAACCTTGTATCAACTGAGATACCAAAAAGGTGATGAAGCACCTAAAA
ATGCTGCCAACTTCAAACGAACGCCAAGCACAAGGAAGACATTACCTCCT
TCTTACAAAACACCGTTGATTGAACCTGAAGTGCCATTCATTGAACCAAC
TAAAGTGGCACCACTTGAAGAAGAACCAGTCCACTATGAAGAAGTACCAG
TCCAATACGAAGAAGTAGAGTTCGATGAAGCCAATCCTGATGATGATAAC
TTTGATCCtgagGAATGGGAAACAGTTGAGAAGACGATGCCTGATGGTTC
GAAGAAGAAATCCCGTCGACGGGTCATCGTTCTTAATGTTGTGAAGAAAC
CAAAGAGTGGGAAATCTCCAGTTGAAGAACCAGTTCAATATTATGAAGAA
GTGGAAGTCGATGAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGA
ATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCC
GTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAA
TCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCGATGA
AGCCAATCCTGATGATGATAAATATGATCCTGAGGAATGGGAAACAGTCG
AGAAGAAGATGCCTGATGGTTCAAAGAAAAAGTTCCGCCGACGAACCATT
GTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGAGGA
AGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTGATG
ATGATAAATATGATCCT
Run BLAST on NCBI

transcript from alignment at sc0000339:287874..296943+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019904 ID=TCONS_00019904|Name=TCONS_00019904|organism=Clytia hemisphaerica|type=transcript|length=9070bp|location=Sequence derived from alignment at sc0000339:287874..296943+ (Clytia hemisphaerica)
GAAAGTCTCTTCTTTTATATATTTAGTTATaataagaaattgaaaatttg ctcaTTCGTGGTAAAAAATGGTTTCCAATGTAGCCCAAACGGGTGAAAAT TCATCTGCTGCTGAAACAAActcaaagaaatcaaagaaaaagtcagGTCC TCAATATGAATGCGTCATCACATGCTTGGATGGCTCTGTGATCAACACTT CTGTTGAGGTTTGAAGTTTTTATTTTCCccttgaattttgatttttgtca tCATGATCATGTATAGGCAAATGGAAAAAAAGCTATTAAATTTATCTCCA AAGTTAGTTTCTTGATTTGATTGGGTtggaatatttattttttgtctaCA AGAACAGGTTGGgtttaattaaattttaattCCAAATAGTGTGTTATACA GATTGTAAGTGTATATTTAATGGTAATTGATTCGGATTAGGCtggacggc aaaccaacaattttttaagtccagccttatTTTGACCTCTAAAAGGCCCT TATAAAGTGCACAAAGAATTTTATCAATGATAATGTGTTTCTATAACCAA TacaacaaagggttttttcgattttagaaaTCAGCCAAAGGAGAAGAACT AGTCAATAAAGTAGCTCAAGAACTTGATGTGAAATCGAAAGATTATGTTG GTCTCCTTTTCAATAATGGAACAAGGGTAagattttcagaatattttccT ATTGTAAAAAGCTTAACATTTTcaggataatttttttcattttaccaTGC ACAGGAGTACCTTtccagaaaattattttgataaacttattttatttttc agcaatGGTTGGATATTCATAAAGATATGAAACATCAGTTGGGAGGTTGG TACTTCTTCAGTtttgtttttggaattttttttagtgaaaatctttaaat tatGCATAACTTGCCCATTTCATTTCTCTTTATGAATTATTTAGCAAGGA AGAGGTGTTTTCAAATgtgctttttatttatttcagatTCTAAAGCAGAA TTTTTATTTCGGGTCAAATTCTATGAGCCTGAGCCCAGCAAAATTCAAGA AGATCATTTAAGGTTTGTTATTTGTTTTCCCCTTTCtatacaaaaatgtt tttgtttgaccCAGCTTTATATTTTTTGCTCAAGTCTCAATATATTGACT GAATTATTTACTCAAtgcaaattcaaattcaaaaacaaatgttttttatt ccttttaatgattttagtgaaacaggtttttaaattttggaattcttttg aaacccattaaatttttgtgttttcagATATTTACTTTATCTCCAGATTA GAGAAGATTTATCAGAAAAAAGGTAAATAATGTTTATCTAGTTAACAAAT TGTGTTGGTATAGGTTTCCATGGAGAAGTTGGATTACAGCTTATTctaat taatgtaattaaagtATATCCTTTAATCATCAAAATTACTTGGCACTTAG CAGCCATATTATTGATTTTAAtgacatcatttttttctttaagattAAAA TGCACAGAAGAAGTAATTGCTCAACTTGGTGCATATACTGCACAAggtaa atttgttttaaaacctTTGGCAATGTGTCATTATTTAATGTTTGTTTTTA GTCAATTGCACCCTGTCAACCAAAGTTTAAAAGTCTTAACTgatattttt caacatttaaaaaattgagattcCAATACATATATAAAAGTATTTACTTG GGATAGTTAAGTCATGTTTATTAAAacttatttgaaatttcaattgatat tttttcagcTGAAGTAGGAGACTTCAATTTATCAGAGCATGAGCATGATT ACTTGAAAGATTATGAGTTTGCTGAGGTAAGTAAAGTCTATACCAACAAA TAACATGATTCCTTAAGCTGAAATCACCCTAAAGGAACTCTTTAAtgaaa aagtcattttcttACCATAGAATACCGATATACTTGAAAGAATCAATTTA TTGCACAAACAACACAGGtattcattttcttcatttttgattcAGTTCCA ACCTTCTCTTGTACTTTTTTCACTGGATAATGCAATGGATAGATGGATTT TACTTAAACTTCGCATAAATGTCTTCATAATAATTACTCTTACTTTTTTA TTTAGGGGTCAAACACCTTTACAAGCTGAACTTAACTTTTTGGAAATTGC CAAAAAGATTCCTAGATATGGAGTGGACGTACATGATGCCATGGTAGGTA TTTTAAGAACAAAATGAAGTTTAAGCAACCCAAACAACCTTTTAATGTCT TAAATGTAAGCTTATGTTCAAATATTGAATGTTCTTTTTTTGTCTTTAGG ATACCAATGGGCATGTAGAGATTGGTATTGCTGCTTTAGGAATAAACATC TATCGGGATGGAAAGCGTGAACAGCTTTTCAGATGGCAAAATATGCATGA CTTCAATTACAACCGAAGAAAATTCACCATTAAACTCAAACAACCAGTGG TACGTATGCTTTTCCTTTAGCTGAAAGTAATTCTATTTTAATTTTGTAAA GCGTCACAtgtttctaaaatattcagtaattttaaatgttttatttcaGA GCGACAATGACAATAAGAAGAATTACGTATATTATTTCGAATCTGCTAAA AGCTGCAAACAATGCTACAAAGTGGCTGTTGAATATCATTCTTTCTTCCG ATTGACAAGACCTGATGCTCCACGAAAACGTGCTGACACCTTGAAAATGG GATCTAGCTTCAGATACAggtataaaaaattgttttcacaaaatatttat ttcaccACTAACTCCACTTCTATCTCAACTAAAGTGAAAACATTGTCACT AAATCACTCAACTCAATTTTTATGTTTCTAAATTAGAAGGTTGATTTaat gcatgttttttttataacaacatccaaaaaattttaagccttcggaatcg gatgttcttaactttttcatttttaagcctaagaatgttcttaaaatctt cttaatttctacattttttgagtgtttttgtgcaattttgaaagaaatcg agtgttttagagcccatgaagccttaaaatgttgttaACTTGTTCTTACT TAACACTTTGGTCATCGAATATGTTCTtatcttatatagtttgttcttat taaaaaagcgtgtatgttcTTTCTTTTCAGTGATCGAACCTTGTATCAAC TGAGATACCAAAAAGGTGATGAAGCACCTAAAAATGCTGCCAACTTCAAA CGAACGCCAAGCACAAGGAAGACATTACCTCCTTCTTACAAAACACCGTT GATTGAACCTGAAGTGCCATTCATTGAACCAACTAAAGGTAGTTTATTCT TCTTTGGAAATGTAAATTAATGCTTATTTCTGGTTTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTTGTTTTCTTTAAGATTAAAATGCA CAGAAGAAGTAATTGCTCAACTTGGTGCATATACTGCACAAggtaaattt gttttaaaacctTTGGCAATGTGTCATTATTTAATGTTTGTTTTTAGTCA ATTGCACCCTGTCAACCAAAGTTTAAAAGTCTTAACTgatatttttcaac atttaaaaaattgagattcCAATACATATATAAAAGTATTTACTTGGGAT AGTTAAGTCATGTTTATTAAAacttatttgaaatttcaattgatattttt tcagcTGAAGTAGGAGACTTCAATTTATCAGAGCATGAGCATGATTACTT GAAAGATTATGAGTTTGCTGAGGTAAGTAAAGTCTATACCAACAAATAAC ATGATTCCTTAAGCTGAAATCACCCTAAAGGAACTCTTTAAtgaaaaagt cattttcttACCATAGAATACCGATATACTTGAAAGAATCAATTTATTGC ACAAACAACACAGGtattcattttcttcatttttgattcAGTTCCAACCT TCTCTTGTACTTTTTTCACTGGATAATGCAATGGATAGATGGATTTTACT TAAACTTCGCATAAATGTCTTCATAATAATTACTCTTACTTTTTTATTTA GGGGTCAAACACCTTTACAAGCTGAACTTAACTTTTTGGAAATTGCCAAA AAGATTCCTAGATATGGAGTGGACGTACATGATGCCATGGTAGGTATTTT AAGAACAAATGAAGTTTAAGCAACCCAAACAACCTTTTAATGTCTTAAAT GTAAGCTTATGTTCAAATATtaaatgttctttttttgtCTTTAGGATACC AATGGGCATGTAGAGATTGGTATTGCTGCTTTAGGAATAAACATCTATCG GGATGGAAAGCGTGAACAGCTTTTCAGATGGCAAAATATGCATGACTTCA ATTACAACCGAAGAAAATTCACCATTAAACTCAAACAACCAGTGGTACGT ATGCTTTTCCTTTAGCTGAAAGTAATTCTATTTTAATTTTGTAAAGCGTC ACATGTTTCTAAAACATTCagtaattttaaatgttttatttcaGAGCGAC AATGACAATAAGAAGAATTACGTATATTATTTCGAATCTGCTAAAAGCTG CAAACAATGCTACAAAGTGGCTGTTGAATATCATTCTTTCTTCCGATTGA CAAGACCTGATGCTCCACGAAAACGTGCTGACACCTTGAAAATGGGATCT AGCTTCAGATACAggtataaaaaattgttttcacaaaatatttatttcac cACTAACTCCACTTCTATCTCAACTAAAGTGAAAACATTGTCACTAAATC ACTCAACTCAATTTTTATGTTTCTAAATTAGAAGGTTGATTTaatgcatg ttttttttataacaacatccaaaaattttaagcTTTCGGAATCGgatctt cttaactttttcagttttaagcctaagaatgttcttaaaatcttcttaat ttctacattttttgagtgtttttgtgcaattttgaaagaaatcgagtgtt ttagagcccatgaagccttaaaatgttgttaACTTGTTCTTACTTAACAC TTTGGTCATCGAATATGTTCTtatcttatatagtttgttcttattaaaaa agcgtgtatgttcTTTCTTTTCAGTGATCGAACCTTGTATCAACTGAGAT ACCAAAAAGGTGATGAAGCACCTAAAAATGCTGCCAACTTCAAACGAACG CCAAGCACAAGGAAGACATTACCTCCTTCTTACAAAACACCGTTGATTGA ACCTGAAGTGCCATTCATTGAACCAACTAAAGGTAGTTTATTCTTCTTTG GAAATGTAAATTAATGCTTATttctggtttttacacaaaaaattGTGGTT GGAATATATGTCTGGAGACTGAAGActaaattttcaaatctttttccttT AGTGGCACCACTTGAAGAAGAACCAGTCCACTATGAAGAAGTACCAGTCC AATACGAAGAAGTAGAGTTCGATGAAGCCAATCCTGATGATGATAACTTT GATCCtgaggtattttttattttggggAGCCTTTCGATGCTATTCTACAG TTTACTACAGTTGAATTAGTTCAGTTTTTTTtgctggaaatttttttatc ttttcgtTTTATGAGAAACTTGGATTCATAAGAAACTTGAAGAACTTTTT ATTAAATCTTCAAAGTCATTGAAAACTTTATCACTTTCCTCTAGGAATGG GAAACAGTTGAGAAGACGATGCCTGATGGTTCGAAGAAGAAATCCCGTCG ACGGGTCATCGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTC CAGTTGAAGAACCAGTTCAATATTATGAAGAAGTGGAAGTCGATGAAGCC AATCCTGATGATGATAAATTTGATCCTAAGGTATATTGTTAGCACAGAAT TTCCTTTTCCGAAATCTTCAGTGTGACCTGAAGATCTGGAAAACGAtaag attttgctgaaattttgcctACTCTGACatgtcttttttttcctttNCGG ATTTGGCTTATATTTTGCGCACTCTGACATGTCTCTATtcctttttttgc ttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTATCAATTTATAATAT ACTAAATTTAAGCCCATTCGACTATGAAATAAAAAGTTGCCAATGTCTTT CATCTGCTTTCACTGCATTTTGAACTCAATCAACTTCACTTACTTTCGTC TTCTTCAGGAATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAG AAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCCAA GAGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATATTATGAAGAAGTGG AAGTTGATGAAGCCAATCCTGATGATGATAAATTTGATCCTAAGGTATCG TTAGCAcagaatttcttttttctaaaaacatcGGGGTGACCTGGAGATTG GGGGAACGATCGGATTTGGCTTATATTTTGCGCACTCTGACATGTCTCTA TtcctttttttgcttgagacgAGCTTTGTACGATAGCTTCGCGTTCTTAT CAATTTATAATATACTAAATTTAAGCCCATTCGACTATGAAATAAAAAGT TGCCAATGTCTTTCATCTGCTTTCACTGCATTTTGAACTCAATCAACTTC ACTTACTTTCGTCTTCTTCAGGAATGGGAAACGGTCGAGAATACGATGCC TGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTG TGAAGAAACCCAAGAGTGGGAAATCTCTAGTCGAAGAACCAGTTCAATAT TATGAAGAAGTGGAAGTTGATGAAGCCAATCCTGATGATGATAAATTTGA TCCTAAGGTATCGTTAGCAcagaatttcttttttctaaaaacatcGGGGT GACCTGGAGATTCGGAGAACGATCGCATTTGGCTGAAGTTTTGCGCACTC TGACATgtctctatttctttttttgcttgagacgAGCTTTGTACGATAGC TTCGCGTTCTTAGTTATtgagaaaatattgaatttaagCCCATTCGACTA TGAAATAAGTTGTCAATGTCTTTCACTGCAATATGAAGTCACTCAACTTC acttactttcgttttcttcagGAATGGGAAACGGTCGAGAATACGATGCC TGATGGTTCGAAGAAGAAATTCCGTAGACGTAATATCGTTCTTAATGTTG TGAAGAAACCAAAGATTGGGAAATCTCCAGTCGAAGAACCAGTTCAATAT AATGAAGAAGTAGAGTTCGATGAAGCCAATCCTGATGATGATAAATATGA TCCTGAGGTATTTTTTATTTGGGGAAAGCctttcaatgcaattttacaGG TGACGAGTTCAGTATTTTTTGCTGGAATTTTTTACGTCTTTTcgttttat aagaaatttttcaaaatcattttaaactTTCTCATTTTCCTCTAGGAATG GGAAACAGTCGAGAAGAAGATGCCTGATGGTTCAAAGAAGAAATTCCGCC GACGAATTATTGTTCTTAATGTTGTGAAGAAACAAAAGAGTGGGAAATCT CCAGTCGAGGAAGAACCAGTTCAATATGAACAAGTGGAAGTTGATGAAGC CAATCCTGATGATGATAAATTTGATCCTAAGGTATCGTTAGCAcagaatt tcttttttctaaaaacatcGGGGTGACCTGGAGATTCGGAGAACGATCGC ATTTGGCTGAAGTTTTGCGCACTCTGACATgtctctatttctttttttgc ttgagacgAGCTNGGGGGAACGATCGGATTTGGCTTATATTTTGCGCACT CTGACATGTCTCTATtcctttttttgcttgagacgAGCTTTGTACGATAG CTTCGCGTTCTTATCAATTTATAATATACTAAATTTAAGCCCATTCGACT ATGAAATAAAAAGTTGCCAATGTCTTTCATCTGCTTTCACTGCATTTTGA ACTCAATCAACTTCACTTACTTTCGTCTTCTTCAGGAATGGGAAACAGTC GAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCCGTAGACGTAATAT CGTTCTTAATGTTGTGAAGAAACCCAAGAGTGGGAAATCTCTAGTCGAAG AACCAGTTCAATATTATGAAGAAGTGGAAGTTGATGAAGCCAATCCTGAT GATGATAAATTTGATCCTAAGGTATCGTTAGCAcagaatttcttttttct aaaaacatcGGGGTGACCTGGAGATTCGGAGAACGATCGCATTTGGCTGA AGTTTTGCGCACTCTGACATgtctctatttctttttttgcttgagacgAG CTTTGTACGATAGCTTCGCGTTCTTAGTTATtgagaaaatattgaattta agCCCATTCGACTATGAAATAAAAAGTTGCCAATGTCTTTCACCTGCTTT CACTGCAATATGAAGTCACTCAACTTCacttactttcgttttcttcagGA ATGGGAAACGGTCGAGAATACGATGCCTGATGGTTCGAAGAAGAAATTCC GTAGACGTAATATCGTTCTTAATGTTGTGAAGAAACCAAAGATTGGGAAA TCTCCAGTCGAAGAACCCATTCAATATAATGAAGAAGTGGAAGTCGATGA AGCCAATCCTGATGATGATAAATATGATCCTGAGGTATGTTTTTTTTGGG GAAAcctttcactgaaatttcaggCAATTTTACAGTTTGCAGGTGACGAG TTCAGTATTTTTGCTGGAATTTTTTACGTctctttgttttataagaaact tttcaaaatcattttaaactTTCTCATTTTCCTCTAGGAATGGGAAACAG TCGAGAAGAAGATGCCTGATGGTTCAAAGAAAAAGTTCCGCCGACGAACC ATTGTTCTTAATGTTGTGAAGAAACCAAAGAGTGGGAAATCTCCAGTCGA GGAAGAACCAGTTCAATATGAAGAAGTGGAAGTTGATGAAGCAAATCCTG ATGATGATAAATATGATCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011193XLOC_011193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019904-exon-sc0000339-1491911889:287874..288081TCONS_00019904-exon-sc0000339-1491911889:287874..288081Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:287874..288081TCONS_00019904-exon-sc0000339-1510915933:287874..288081Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:287874..288081TCONS_00019904-exon-sc0000339-1575043694:287874..288081Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:288451..288549TCONS_00019904-exon-sc0000339-1491911889:288451..288549Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:288451..288549TCONS_00019904-exon-sc0000339-1510915933:288451..288549Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:288451..288549TCONS_00019904-exon-sc0000339-1575043694:288451..288549Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:288676..288718TCONS_00019904-exon-sc0000339-1491911889:288676..288718Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:288676..288718TCONS_00019904-exon-sc0000339-1510915933:288676..288718Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:288676..288718TCONS_00019904-exon-sc0000339-1575043694:288676..288718Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:288860..288935TCONS_00019904-exon-sc0000339-1491911889:288860..288935Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:288860..288935TCONS_00019904-exon-sc0000339-1510915933:288860..288935Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:288860..288935TCONS_00019904-exon-sc0000339-1575043694:288860..288935Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:289151..289195TCONS_00019904-exon-sc0000339-1491911889:289151..289195Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:289151..289195TCONS_00019904-exon-sc0000339-1510915933:289151..289195Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:289151..289195TCONS_00019904-exon-sc0000339-1575043694:289151..289195Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:289367..289419TCONS_00019904-exon-sc0000339-1491911889:289367..289419Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:289367..289419TCONS_00019904-exon-sc0000339-1510915933:289367..289419Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:289367..289419TCONS_00019904-exon-sc0000339-1575043694:289367..289419Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:289632..289699TCONS_00019904-exon-sc0000339-1491911889:289632..289699Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:289632..289699TCONS_00019904-exon-sc0000339-1510915933:289632..289699Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:289632..289699TCONS_00019904-exon-sc0000339-1575043694:289632..289699Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:289794..289840TCONS_00019904-exon-sc0000339-1491911889:289794..289840Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:289794..289840TCONS_00019904-exon-sc0000339-1510915933:289794..289840Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:289794..289840TCONS_00019904-exon-sc0000339-1575043694:289794..289840Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:289979..290066TCONS_00019904-exon-sc0000339-1491911889:289979..290066Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:289979..290066TCONS_00019904-exon-sc0000339-1510915933:289979..290066Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:289979..290066TCONS_00019904-exon-sc0000339-1575043694:289979..290066Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:290173..290322TCONS_00019904-exon-sc0000339-1491911889:290173..290322Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:290173..290322TCONS_00019904-exon-sc0000339-1510915933:290173..290322Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:290173..290322TCONS_00019904-exon-sc0000339-1575043694:290173..290322Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:290423..290592TCONS_00019904-exon-sc0000339-1491911889:290423..290592Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:290423..290592TCONS_00019904-exon-sc0000339-1510915933:290423..290592Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:290423..290592TCONS_00019904-exon-sc0000339-1575043694:290423..290592Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:293098..293255TCONS_00019904-exon-sc0000339-1491911889:293098..293255Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:293098..293255TCONS_00019904-exon-sc0000339-1510915933:293098..293255Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:293098..293255TCONS_00019904-exon-sc0000339-1575043694:293098..293255Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:293376..293482TCONS_00019904-exon-sc0000339-1491911889:293376..293482Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:293376..293482TCONS_00019904-exon-sc0000339-1510915933:293376..293482Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:293376..293482TCONS_00019904-exon-sc0000339-1575043694:293376..293482Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:293668..293853TCONS_00019904-exon-sc0000339-1491911889:293668..293853Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:293668..293853TCONS_00019904-exon-sc0000339-1510915933:293668..293853Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:293668..293853TCONS_00019904-exon-sc0000339-1575043694:293668..293853Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:296422..296607TCONS_00019904-exon-sc0000339-1491911889:296422..296607Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:296422..296607TCONS_00019904-exon-sc0000339-1510915933:296422..296607Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:296422..296607TCONS_00019904-exon-sc0000339-1575043694:296422..296607Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1491911889:296761..296943TCONS_00019904-exon-sc0000339-1491911889:296761..296943Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1510915933:296761..296943TCONS_00019904-exon-sc0000339-1510915933:296761..296943Clytia hemisphaericaexon
TCONS_00019904-exon-sc0000339-1575043694:296761..296943TCONS_00019904-exon-sc0000339-1575043694:296761..296943Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000339supercontigsc0000339:287874..296943 +
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00019904 vs. Swiss-Prot (Human)
Match: E41L2 (Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 2.492e-69
Identity = 141/351 (40.17%), Postives = 207/351 (58.97%), Query Frame = 2
Query:   98 NSSAAETNSKKSKKKSGPQYECVITCLDGSVINTSVEKSAKGEELVNKVAQELDVKSKDYVGLLFNNGTRQ--WLDIHKDMKHQLGDSKAEFLFRVKFYEPEPSKIQEDHLRYLLYLQIREDLSEKRLKCTEEVIAQLGAYTAQAEVGDFNLSEHEHDYLKDYEFA--ENTDILERINLLHKQHRGQTPLQAELNFLEIAKKIPRYGVDVHDAMDTNG-HVEIGIAALGINIYRDGKREQLFRWQNMHDFNYNRRKFTIKLKQPVSDNDNKKNYVYYFESAKSCKQCYKVAVEYHSFFRLTRPDAPRKRADTLKMGSSFRYSDRTLYQLRYQKGDEAPKNAANFKRTPSTR 1135
            N   AE  S+K  KK+    +C +T LDG+  +  +EK AKG+ L +KV + L++  KDY GLLF     Q  WLD  K++K QL +    F F VKFY P+PS++ ED  RY L LQ+R+D++  RL C+    A LG+YT QAE+GD++  EH    L +++FA  +  ++ E++  LHK HRG +P QA+  FLE AK++  YGVD+H A D+ G  +++G+ A G+ IY+D  R   F W  +   +Y R  F IK++ P      +    +   + ++ K+ +KV VE+H+F+RL  P+ P K A  L +GS FRYS RT  Q R Q      + A +F+RT S R
Sbjct:  200 NELKAEKASQKVTKKT-KTVQCKVTLLDGTEYSCDLEKHAKGQVLFDKVCEHLNLLEKDYFGLLFQESPEQKNWLDPAKEIKRQLRNLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDIASGRLPCSFVTHALLGSYTLQAELGDYDPEEHGSIDLSEFQFAPTQTKELEEKVAELHKTHRGLSPAQADSQFLENAKRLSMYGVDLHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNFYIKVR-PAELEQFESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPK-AKFLTLGSKFRYSGRTQAQTR-QASTLIDRPAPHFERTSSKR 546          
The following BLAST results are available for this feature:
BLAST of TCONS_00019904 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E41L22.492e-6940.17Band 4.1-like protein 2 OS=Homo sapiens GN=EPB41L2... [more]
back to top